RNA–Protein interactions for RNA: ENST00000522136.5

CLK4-210, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,955 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-210ENST00000522136 HSPA1AP0DMV8 641 aaKnown RBP15□□□□□ -0.01
CLK4-210ENST00000522136 HSPA1BP0DMV9 641 aaKnown RBP15□□□□□ -0.01
CLK4-210ENST00000522136 PRKAR2AP13861 404 aaKnown RBP15□□□□□ -0.01
CLK4-210ENST00000522136 CCND3P30281 292 aaPredicted RBP15□□□□□ -0.01
CLK4-210ENST00000522136 TRMT1LQ7Z2T5 733 aaKnown RBP15□□□□□ -0.01
CLK4-210ENST00000522136 CCDC60Q8IWA6 550 aaPredicted RBP15□□□□□ -0.01
CLK4-210ENST00000522136 SMAP1Q8IYB5 467 aaPredicted RBP15□□□□□ -0.01
CLK4-210ENST00000522136 IQUBQ8NA54 791 aa15□□□□□ -0.01
CLK4-210ENST00000522136 PXYLP1Q8TE99 480 aa15□□□□□ -0.01
CLK4-210ENST00000522136 AFG1LQ8WV93 481 aa15□□□□□ -0.01
CLK4-210ENST00000522136 GPR20Q99678 358 aa15□□□□□ -0.01
CLK4-210ENST00000522136 LXNQ9BS40 222 aa15□□□□□ -0.01
CLK4-210ENST00000522136 TUFT1Q9NNX1 390 aa15□□□□□ -0.01
CLK4-210ENST00000522136 BLOC1S4Q9NUP1 217 aa15□□□□□ -0.01
CLK4-210ENST00000522136 GABBR1Q9UBS5 961 aa15□□□□□ -0.01
CLK4-210ENST00000522136 GNEQ9Y223 722 aaKnown RBP15□□□□□ -0.01
CLK4-210ENST00000522136 E9PMD0 336 aa14.99□□□□□ -0.01
CLK4-210ENST00000522136 NOP56O00567 594 aaKnown RBP14.99□□□□□ -0.01
CLK4-210ENST00000522136 DYNC1LI2O43237 492 aaPredicted RBP14.99□□□□□ -0.01
CLK4-210ENST00000522136 P4HBP07237 508 aaKnown RBP14.99□□□□□ -0.01
CLK4-210ENST00000522136 PSAPP07602 524 aa14.99□□□□□ -0.01
CLK4-210ENST00000522136 TCF7P36402 384 aaPredicted RBP14.99□□□□□ -0.01
CLK4-210ENST00000522136 LBX1P52954 281 aa14.99□□□□□ -0.01
CLK4-210ENST00000522136 PRMT2P55345 433 aa14.99□□□□□ -0.01
CLK4-210ENST00000522136 LAMC2Q13753 1193 aa14.99□□□□□ -0.01
CLK4-210ENST00000522136 DHX8Q14562 1220 aaKnown RBP14.99□□□□□ -0.01
CLK4-210ENST00000522136 MIS18BP1Q6P0N0 1132 aa14.99□□□□□ -0.01
CLK4-210ENST00000522136 PDXDC2PQ6P474 469 aa14.99□□□□□ -0.01
CLK4-210ENST00000522136 CNNM3Q8NE01 707 aa14.99□□□□□ -0.01
CLK4-210ENST00000522136 RDM1Q8NG50 284 aa14.99□□□□□ -0.01
CLK4-210ENST00000522136 OR6J1Q8NGC5 347 aa14.99□□□□□ -0.01
CLK4-210ENST00000522136 PIGOQ8TEQ8 1089 aa14.99□□□□□ -0.01
CLK4-210ENST00000522136 SEPT1Q8WYJ6 367 aa14.99□□□□□ -0.01
CLK4-210ENST00000522136 ERCC4Q92889 916 aaPredicted RBP14.99□□□□□ -0.01
CLK4-210ENST00000522136 PCYT2Q99447 389 aa14.99□□□□□ -0.01
CLK4-210ENST00000522136 STK24Q9Y6E0 443 aa14.99□□□□□ -0.01
CLK4-210ENST00000522136 KDM3AQ9Y4C1 1321 aa14.99□□□□□ -0.01
CLK4-210ENST00000522136 BACH1O14867 736 aa14.98□□□□□ -0.01
CLK4-210ENST00000522136 SLFN14P0C7P3 912 aa14.98□□□□□ -0.01
CLK4-210ENST00000522136 GRK4P32298 578 aa14.98□□□□□ -0.01
CLK4-210ENST00000522136 AFMP43652 599 aa14.98□□□□□ -0.01
CLK4-210ENST00000522136 QARSP47897 775 aaKnown RBP14.98□□□□□ -0.01
CLK4-210ENST00000522136 MCM6Q14566 821 aa14.98□□□□□ -0.01
CLK4-210ENST00000522136 MTRQ99707 1265 aa14.98□□□□□ -0.01
CLK4-210ENST00000522136 NT5C3AQ9H0P0 336 aa14.98□□□□□ -0.01
CLK4-210ENST00000522136 GZF1Q9H116 711 aaPredicted RBP14.98□□□□□ -0.01
CLK4-210ENST00000522136 CLSTN2Q9H4D0 955 aa14.98□□□□□ -0.01
CLK4-210ENST00000522136 NRBP1Q9UHY1 535 aa14.98□□□□□ -0.01
CLK4-210ENST00000522136 PTPN22Q9Y2R2 807 aa14.98□□□□□ -0.01
CLK4-210ENST00000522136 NKRFO15226 690 aaKnown RBP eCLIP14.98□□□□□ -0.01
CLK4-210ENST00000522136 ZNF862O60290 1169 aa14.98□□□□□ -0.01
CLK4-210ENST00000522136 AKR1A1P14550 325 aa14.98□□□□□ -0.01
CLK4-210ENST00000522136 CASP1P29466 404 aa14.98□□□□□ -0.01
CLK4-210ENST00000522136 UTP14CQ5TAP6 766 aaKnown RBP14.98□□□□□ -0.01
CLK4-210ENST00000522136 TLK2Q86UE8 772 aa14.98□□□□□ -0.01
CLK4-210ENST00000522136 TRIM50Q86XT4 487 aa14.98□□□□□ -0.01
CLK4-210ENST00000522136 CEP57L1Q8IYX8 460 aa14.98□□□□□ -0.01
CLK4-210ENST00000522136 SH3TC2Q8TF17 1288 aa14.98□□□□□ -0.01
CLK4-210ENST00000522136 TIGD1Q96MW7 591 aa14.98□□□□□ -0.01
CLK4-210ENST00000522136 NUP62CLQ9H1M0 184 aa14.98□□□□□ -0.01
CLK4-210ENST00000522136 IGKV6D-21A0A0A0MT36 114 aa14.97□□□□□ -0.01
CLK4-210ENST00000522136 TMEM150BA6NC51 233 aa14.97□□□□□ -0.01
CLK4-210ENST00000522136 INHAP05111 366 aa14.97□□□□□ -0.01
CLK4-210ENST00000522136 PSMC5P62195 406 aa14.97□□□□□ -0.01
CLK4-210ENST00000522136 CCDC183Q5T5S1 534 aa14.97□□□□□ -0.01
CLK4-210ENST00000522136 MAP3K21Q5TCX8 1036 aa14.97□□□□□ -0.01
CLK4-210ENST00000522136 SLAIN1Q8ND83 568 aa14.97□□□□□ -0.01
CLK4-210ENST00000522136 PPTC7Q8NI37 304 aa14.97□□□□□ -0.01
CLK4-210ENST00000522136 NEK9Q8TD19 979 aa14.97□□□□□ -0.01
CLK4-210ENST00000522136 RAD54LQ92698 747 aa14.97□□□□□ -0.01
CLK4-210ENST00000522136 EMID1Q96A84 441 aaPredicted RBP14.97□□□□□ -0.01
CLK4-210ENST00000522136 PAGE5Q96GU1 130 aa14.97□□□□□ -0.01
CLK4-210ENST00000522136 ZSWIM4Q9H7M6 989 aa14.97□□□□□ -0.01
CLK4-210ENST00000522136 ZNF302Q9NR11 478 aa14.97□□□□□ -0.01
CLK4-210ENST00000522136 SEPT4O43236 478 aa14.96□□□□□ -0.01
CLK4-210ENST00000522136 SLC26A4O43511 780 aa14.96□□□□□ -0.01
CLK4-210ENST00000522136 SSBP05455 408 aaKnown RBP eCLIP14.96□□□□□ -0.01
CLK4-210ENST00000522136 PRR29P0C7W0 189 aa14.96□□□□□ -0.01
CLK4-210ENST00000522136 ATP4AP20648 1035 aa14.96□□□□□ -0.01
CLK4-210ENST00000522136 SH2D3AQ9BRG2 576 aa14.96□□□□□ -0.01
CLK4-210ENST00000522136 PYM1Q9BRP8 204 aaKnown RBP14.96□□□□□ -0.01
CLK4-210ENST00000522136 TNMDQ9H2S6 317 aa14.96□□□□□ -0.01
CLK4-210ENST00000522136 STK17AQ9UEE5 414 aa14.96□□□□□ -0.01
CLK4-210ENST00000522136 USP25Q9UHP3 1055 aa14.96□□□□□ -0.01
CLK4-210ENST00000522136 DNM3Q9UQ16 869 aa14.96□□□□□ -0.01
CLK4-210ENST00000522136 CENPFP49454 3210 aa14.96□□□□□ -0.01
CLK4-210ENST00000522136 MDM2Q00987 491 aaPredicted RBP14.96□□□□□ -0.01
CLK4-210ENST00000522136 BEX3Q00994 111 aa14.96□□□□□ -0.01
CLK4-210ENST00000522136 PNOCQ13519 176 aa14.96□□□□□ -0.01
CLK4-210ENST00000522136 SH3RF1Q7Z6J0 888 aa14.96□□□□□ -0.01
CLK4-210ENST00000522136 CKAP2LQ8IYA6 745 aa14.96□□□□□ -0.01
CLK4-210ENST00000522136 LARP4BQ92615 738 aaKnown RBP14.96□□□□□ -0.01
CLK4-210ENST00000522136 BLZF1Q9H2G9 400 aa14.96□□□□□ -0.01
CLK4-210ENST00000522136 MAFBQ9Y5Q3 323 aaPredicted RBP14.96□□□□□ -0.01
CLK4-210ENST00000522136 HTTP42858 3142 aa14.96□□□□□ -0.02
CLK4-210ENST00000522136 IGSF9BQ9UPX0 1349 aa14.95□□□□□ -0.02
CLK4-210ENST00000522136 DUSP11O75319 330 aaKnown RBP14.95□□□□□ -0.02
CLK4-210ENST00000522136 LGR5O75473 907 aa14.95□□□□□ -0.02
CLK4-210ENST00000522136 STBD1O95210 358 aa14.95□□□□□ -0.02
CLK4-210ENST00000522136 MMP3P08254 477 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms