RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 NLGN1Q8N2Q7 840 aa14.98□□□□□ -0.01
SYNPO-205ENST00000522122 NOL3O60936 208 aaKnown RBP14.98□□□□□ -0.01
SYNPO-205ENST00000522122 TBC1D31Q96DN5 1066 aa14.98□□□□□ -0.01
SYNPO-205ENST00000522122 MLXIPQ9HAP2 919 aa14.98□□□□□ -0.01
SYNPO-205ENST00000522122 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.98□□□□□ -0.01
SYNPO-205ENST00000522122 TNNC2P02585 160 aa14.97□□□□□ -0.01
SYNPO-205ENST00000522122 KAZNQ674X7 775 aa14.97□□□□□ -0.01
SYNPO-205ENST00000522122 SCYL2Q6P3W7 929 aa14.97□□□□□ -0.01
SYNPO-205ENST00000522122 ACCSQ96QU6 501 aa14.97□□□□□ -0.01
SYNPO-205ENST00000522122 CSRNP1Q96S65 589 aa14.97□□□□□ -0.01
SYNPO-205ENST00000522122 PARVGQ9HBI0 331 aa14.97□□□□□ -0.01
SYNPO-205ENST00000522122 AS3MTQ9HBK9 375 aa14.97□□□□□ -0.01
SYNPO-205ENST00000522122 MEGF6O75095 1541 aa14.97□□□□□ -0.01
SYNPO-205ENST00000522122 FAM205CA6NFA0 338 aa14.97□□□□□ -0.01
SYNPO-205ENST00000522122 SERPINB2P05120 415 aa14.97□□□□□ -0.01
SYNPO-205ENST00000522122 MAPK4P31152 587 aa14.97□□□□□ -0.01
SYNPO-205ENST00000522122 GRIN1Q05586 938 aa14.97□□□□□ -0.01
SYNPO-205ENST00000522122 FAM196AQ6ZSG2 479 aa14.97□□□□□ -0.01
SYNPO-205ENST00000522122 GSPT2Q8IYD1 628 aaKnown RBP14.97□□□□□ -0.01
SYNPO-205ENST00000522122 AFAP1L2Q8N4X5 818 aa14.97□□□□□ -0.01
SYNPO-205ENST00000522122 MYCBPQ99417 103 aaPredicted RBP14.97□□□□□ -0.01
SYNPO-205ENST00000522122 ORC4O43929 436 aa14.97□□□□□ -0.01
SYNPO-205ENST00000522122 TMEM191BP0C7N4 346 aa14.97□□□□□ -0.01
SYNPO-205ENST00000522122 ZNF18P17022 549 aa14.97□□□□□ -0.01
SYNPO-205ENST00000522122 NR1D1P20393 614 aa14.97□□□□□ -0.01
SYNPO-205ENST00000522122 ARMC9Q7Z3E5 817 aa14.97□□□□□ -0.01
SYNPO-205ENST00000522122 FLAD1Q8NFF5 587 aa14.97□□□□□ -0.01
SYNPO-205ENST00000522122 LRRC8CQ8TDW0 803 aa14.97□□□□□ -0.01
SYNPO-205ENST00000522122 CCT6BQ92526 530 aa14.97□□□□□ -0.01
SYNPO-205ENST00000522122 DHX36Q9H2U1 1008 aaKnown RBP14.97□□□□□ -0.01
SYNPO-205ENST00000522122 TMEM206Q9H813 350 aa14.97□□□□□ -0.01
SYNPO-205ENST00000522122 POLGP54098 1239 aaPredicted RBP14.97□□□□□ -0.01
SYNPO-205ENST00000522122 KRT81Q14533 505 aa14.97□□□□□ -0.01
SYNPO-205ENST00000522122 SGO2Q562F6 1265 aa14.97□□□□□ -0.01
SYNPO-205ENST00000522122 CCDC125Q86Z20 511 aa14.97□□□□□ -0.01
SYNPO-205ENST00000522122 NRXN3Q9Y4C0 1643 aa14.96□□□□□ -0.01
SYNPO-205ENST00000522122 HMGB1P1B2RPK0 211 aaPredicted RBP14.96□□□□□ -0.01
SYNPO-205ENST00000522122 KCNQ4P56696 695 aa14.96□□□□□ -0.01
SYNPO-205ENST00000522122 IL9RQ01113 521 aa14.96□□□□□ -0.01
SYNPO-205ENST00000522122 TRIM11Q96F44 468 aa14.96□□□□□ -0.01
SYNPO-205ENST00000522122 MMS19Q96T76 1030 aa14.96□□□□□ -0.01
SYNPO-205ENST00000522122 SUGCTQ9HAC7 445 aa14.96□□□□□ -0.01
SYNPO-205ENST00000522122 ZNF446Q9NWS9 450 aa14.96□□□□□ -0.01
SYNPO-205ENST00000522122 PPEF1O14829 653 aaPredicted RBP14.96□□□□□ -0.01
SYNPO-205ENST00000522122 CYP2D6P10635 497 aa14.96□□□□□ -0.01
SYNPO-205ENST00000522122 PRDX5P30044 214 aa14.96□□□□□ -0.01
SYNPO-205ENST00000522122 YARSP54577 528 aaKnown RBP14.96□□□□□ -0.01
SYNPO-205ENST00000522122 ORC2Q13416 577 aaPredicted RBP14.96□□□□□ -0.01
SYNPO-205ENST00000522122 SNCBQ16143 134 aa14.96□□□□□ -0.01
SYNPO-205ENST00000522122 NT5DC1Q5TFE4 455 aa14.96□□□□□ -0.01
SYNPO-205ENST00000522122 PHLDB3Q6NSJ2 640 aa14.96□□□□□ -0.01
SYNPO-205ENST00000522122 ADSSL1Q8N142 457 aa14.96□□□□□ -0.01
SYNPO-205ENST00000522122 CNKSR1Q969H4 720 aa14.96□□□□□ -0.01
SYNPO-205ENST00000522122 MIS12Q9H081 205 aa14.96□□□□□ -0.01
SYNPO-205ENST00000522122 HPCAL4Q9UM19 191 aa14.96□□□□□ -0.01
SYNPO-205ENST00000522122 NFU1Q9UMS0 254 aa14.96□□□□□ -0.01
SYNPO-205ENST00000522122 POC1B-GALNT4F8VUJ3 575 aa14.96□□□□□ -0.01
SYNPO-205ENST00000522122 ECEL1O95672 775 aa14.96□□□□□ -0.01
SYNPO-205ENST00000522122 CYP19A1P11511 503 aaPredicted RBP14.96□□□□□ -0.01
SYNPO-205ENST00000522122 GRM4Q14833 912 aa14.96□□□□□ -0.01
SYNPO-205ENST00000522122 HAUS1Q96CS2 278 aa14.96□□□□□ -0.01
SYNPO-205ENST00000522122 OSBPL9Q96SU4 736 aa14.96□□□□□ -0.01
SYNPO-205ENST00000522122 SPZ1Q9BXG8 430 aa14.96□□□□□ -0.01
SYNPO-205ENST00000522122 CRCPO75575 148 aa14.96□□□□□ -0.02
SYNPO-205ENST00000522122 APBA3O96018 575 aa14.96□□□□□ -0.02
SYNPO-205ENST00000522122 ATP6V0A1Q93050 837 aa14.96□□□□□ -0.02
SYNPO-205ENST00000522122 PCIF1Q9H4Z3 704 aa14.96□□□□□ -0.02
SYNPO-205ENST00000522122 NOVA2Q9UNW9 492 aaKnown RBP14.96□□□□□ -0.02
SYNPO-205ENST00000522122 CCDC188H7C350 402 aa14.95□□□□□ -0.02
SYNPO-205ENST00000522122 BEND6Q5SZJ8 279 aaPredicted RBP14.95□□□□□ -0.02
SYNPO-205ENST00000522122 METTL13Q8N6R0 699 aa14.95□□□□□ -0.02
SYNPO-205ENST00000522122 FMO2Q99518 471 aa14.95□□□□□ -0.02
SYNPO-205ENST00000522122 TMEM47Q9BQJ4 181 aa14.95□□□□□ -0.02
SYNPO-205ENST00000522122 BHMT2Q9H2M3 363 aa14.95□□□□□ -0.02
SYNPO-205ENST00000522122 CNOT10Q9H9A5 744 aaKnown RBP14.95□□□□□ -0.02
SYNPO-205ENST00000522122 CEP72Q9P209 647 aa14.95□□□□□ -0.02
SYNPO-205ENST00000522122 ARHGAP23Q9P227 1491 aa14.95□□□□□ -0.02
SYNPO-205ENST00000522122 PVALEFA0A1B0GWK0 134 aa14.95□□□□□ -0.02
SYNPO-205ENST00000522122 GDF11O95390 407 aa14.95□□□□□ -0.02
SYNPO-205ENST00000522122 PIK3CAP42336 1068 aa14.95□□□□□ -0.02
SYNPO-205ENST00000522122 LLGL1Q15334 1064 aa14.95□□□□□ -0.02
SYNPO-205ENST00000522122 CC2D2BQ6DHV5 1058 aa14.95□□□□□ -0.02
SYNPO-205ENST00000522122 USP49Q70CQ1 688 aa14.95□□□□□ -0.02
SYNPO-205ENST00000522122 NEK9Q8TD19 979 aa14.95□□□□□ -0.02
SYNPO-205ENST00000522122 PNKPQ96T60 521 aa14.95□□□□□ -0.02
SYNPO-205ENST00000522122 UBE2TQ9NPD8 197 aaPredicted RBP14.95□□□□□ -0.02
SYNPO-205ENST00000522122 FAM237AA0A1B0GTK4 181 aa14.95□□□□□ -0.02
SYNPO-205ENST00000522122 GRID2IPA4D2P6 1211 aa14.95□□□□□ -0.02
SYNPO-205ENST00000522122 SRGNP10124 158 aa14.95□□□□□ -0.02
SYNPO-205ENST00000522122 MXI1P50539 228 aa14.95□□□□□ -0.02
SYNPO-205ENST00000522122 TOB1P50616 345 aaPredicted RBP14.95□□□□□ -0.02
SYNPO-205ENST00000522122 ANO3Q9BYT9 981 aa14.95□□□□□ -0.02
SYNPO-205ENST00000522122 DCP1AQ9NPI6 582 aaPredicted RBP14.95□□□□□ -0.02
SYNPO-205ENST00000522122 PI4KBQ9UBF8 816 aa14.95□□□□□ -0.02
SYNPO-205ENST00000522122 TXNDC9O14530 226 aa14.95□□□□□ -0.02
SYNPO-205ENST00000522122 CUL1Q13616 776 aa14.95□□□□□ -0.02
SYNPO-205ENST00000522122 SLMAPQ14BN4 828 aa14.95□□□□□ -0.02
SYNPO-205ENST00000522122 TAF12Q16514 161 aa14.95□□□□□ -0.02
SYNPO-205ENST00000522122 MUM1Q2TAK8 710 aa14.95□□□□□ -0.02
SYNPO-205ENST00000522122 DCAF15Q66K64 600 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms