RNA–Protein interactions for RNA: ENST00000521941.1

CTNNA1-231, Transcript of catenin alpha 1, human

TSL 3

Gene CTNNA1, Length 224 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNNA1-231	ENST00000521941	TEKT3	Q9BXF9	490 aa		9.47	□□□□□ -0.89
CTNNA1-231	ENST00000521941	FTO	Q9C0B1	505 aa	Known RBP eCLIP	9.47	□□□□□ -0.89
CTNNA1-231	ENST00000521941	IL23A	Q9NPF7	189 aa		9.47	□□□□□ -0.89
CTNNA1-231	ENST00000521941	ERAP1	Q9NZ08	941 aa		9.47	□□□□□ -0.89
CTNNA1-231	ENST00000521941	BTBD18	B2RXH4	712 aa		9.46	□□□□□ -0.9
CTNNA1-231	ENST00000521941	PITPNM1	O00562	1244 aa		9.46	□□□□□ -0.9
CTNNA1-231	ENST00000521941	DHX15	O43143	795 aa	Known RBP	9.46	□□□□□ -0.9
CTNNA1-231	ENST00000521941	MARCH6	O60337	910 aa		9.46	□□□□□ -0.9
CTNNA1-231	ENST00000521941	LGR5	O75473	907 aa		9.46	□□□□□ -0.9
CTNNA1-231	ENST00000521941	IQCF3	P0C7M6	154 aa		9.46	□□□□□ -0.9
CTNNA1-231	ENST00000521941	GNAT1	P11488	350 aa		9.46	□□□□□ -0.9
CTNNA1-231	ENST00000521941	CKB	P12277	381 aa		9.46	□□□□□ -0.9
CTNNA1-231	ENST00000521941	SELP	P16109	830 aa		9.46	□□□□□ -0.9
CTNNA1-231	ENST00000521941	ATP2B1	P20020	1258 aa		9.46	□□□□□ -0.9
CTNNA1-231	ENST00000521941	THPO	P40225	353 aa		9.46	□□□□□ -0.9
CTNNA1-231	ENST00000521941	STAT5B	P51692	787 aa		9.46	□□□□□ -0.9
CTNNA1-231	ENST00000521941	KRT76	Q01546	638 aa		9.46	□□□□□ -0.9
CTNNA1-231	ENST00000521941	PTK7	Q13308	1070 aa		9.46	□□□□□ -0.9
CTNNA1-231	ENST00000521941	PLCB4	Q15147	1175 aa		9.46	□□□□□ -0.9
CTNNA1-231	ENST00000521941	SAFB	Q15424	915 aa	Known RBP eCLIP	9.46	□□□□□ -0.9
CTNNA1-231	ENST00000521941	ZNF618	Q5T7W0	954 aa		9.46	□□□□□ -0.9
CTNNA1-231	ENST00000521941	SWSAP1	Q6NVH7	229 aa		9.46	□□□□□ -0.9
CTNNA1-231	ENST00000521941	PDXDC2P	Q6P474	469 aa		9.46	□□□□□ -0.9
CTNNA1-231	ENST00000521941	POTED	Q86YR6	584 aa		9.46	□□□□□ -0.9
CTNNA1-231	ENST00000521941	CAGE1	Q8TC20	777 aa		9.46	□□□□□ -0.9
CTNNA1-231	ENST00000521941	AFAP1L1	Q8TED9	768 aa		9.46	□□□□□ -0.9
CTNNA1-231	ENST00000521941	TMX3	Q96JJ7	454 aa		9.46	□□□□□ -0.9
CTNNA1-231	ENST00000521941	LLPH	Q9BRT6	129 aa	Known RBP	9.46	□□□□□ -0.9
CTNNA1-231	ENST00000521941	UNC45A	Q9H3U1	944 aa		9.46	□□□□□ -0.9
CTNNA1-231	ENST00000521941	ZNF302	Q9NR11	478 aa		9.46	□□□□□ -0.9
CTNNA1-231	ENST00000521941	TBC1D22B	Q9NU19	505 aa		9.46	□□□□□ -0.9
CTNNA1-231	ENST00000521941	GBF1	Q92538	1859 aa		9.46	□□□□□ -0.9
CTNNA1-231	ENST00000521941	TET1	Q8NFU7	2136 aa		9.46	□□□□□ -0.9
CTNNA1-231	ENST00000521941	SI	P14410	1827 aa		9.45	□□□□□ -0.9
CTNNA1-231	ENST00000521941	POTEB3	A0JP26	581 aa		9.45	□□□□□ -0.9
CTNNA1-231	ENST00000521941	WDR64	B1ANS9	1081 aa		9.45	□□□□□ -0.9
CTNNA1-231	ENST00000521941	FGB	P02675	491 aa		9.45	□□□□□ -0.9
CTNNA1-231	ENST00000521941	PSAP	P07602	524 aa		9.45	□□□□□ -0.9
CTNNA1-231	ENST00000521941	INSRR	P14616	1297 aa		9.45	□□□□□ -0.9
CTNNA1-231	ENST00000521941		Q4G0T1	1027 aa		9.45	□□□□□ -0.9
CTNNA1-231	ENST00000521941	ZNF746	Q6NUN9	644 aa	Predicted RBP	9.45	□□□□□ -0.9
CTNNA1-231	ENST00000521941	POTEB	Q6S5H4	581 aa		9.45	□□□□□ -0.9
CTNNA1-231	ENST00000521941	ABHD15	Q6UXT9	468 aa		9.45	□□□□□ -0.9
CTNNA1-231	ENST00000521941	RUFY4	Q6ZNE9	571 aa		9.45	□□□□□ -0.9
CTNNA1-231	ENST00000521941	C16orf59	Q7L2K0	433 aa		9.45	□□□□□ -0.9
CTNNA1-231	ENST00000521941	MIER3	Q7Z3K6	550 aa		9.45	□□□□□ -0.9
CTNNA1-231	ENST00000521941	SERINC5	Q86VE9	423 aa		9.45	□□□□□ -0.9
CTNNA1-231	ENST00000521941	RPUSD2	Q8IZ73	545 aa	Known RBP	9.45	□□□□□ -0.9
CTNNA1-231	ENST00000521941	SLC5A5	Q92911	643 aa		9.45	□□□□□ -0.9
CTNNA1-231	ENST00000521941	FAM49A	Q9H0Q0	323 aa	Predicted RBP	9.45	□□□□□ -0.9
CTNNA1-231	ENST00000521941	DISC1	Q9NRI5	854 aa		9.45	□□□□□ -0.9
CTNNA1-231	ENST00000521941	GABBR1	Q9UBS5	961 aa		9.45	□□□□□ -0.9
CTNNA1-231	ENST00000521941	TUBE1	Q9UJT0	475 aa		9.45	□□□□□ -0.9
CTNNA1-231	ENST00000521941	NRCAM	Q92823	1304 aa		9.45	□□□□□ -0.9
CTNNA1-231	ENST00000521941	LAMA3	Q16787	3333 aa		9.44	□□□□□ -0.9
CTNNA1-231	ENST00000521941	CYP3A7-CYP3A51P	A0A087WV96	503 aa		9.44	□□□□□ -0.9
CTNNA1-231	ENST00000521941	WNT7A	O00755	349 aa		9.44	□□□□□ -0.9
CTNNA1-231	ENST00000521941	ATG7	O95352	703 aa		9.44	□□□□□ -0.9
CTNNA1-231	ENST00000521941	GCFC2	P16383	781 aa	Known RBP	9.44	□□□□□ -0.9
CTNNA1-231	ENST00000521941	CYP3A7	P24462	503 aa		9.44	□□□□□ -0.9
CTNNA1-231	ENST00000521941	GJB2	P29033	226 aa		9.44	□□□□□ -0.9
CTNNA1-231	ENST00000521941	HOXC8	P31273	242 aa		9.44	□□□□□ -0.9
CTNNA1-231	ENST00000521941	MCM2	P49736	904 aa		9.44	□□□□□ -0.9
CTNNA1-231	ENST00000521941	UGCG	Q16739	394 aa		9.44	□□□□□ -0.9
CTNNA1-231	ENST00000521941	TRIM71	Q2Q1W2	868 aa	Known RBP	9.44	□□□□□ -0.9
CTNNA1-231	ENST00000521941	LRIT3	Q3SXY7	679 aa		9.44	□□□□□ -0.9
CTNNA1-231	ENST00000521941	NCAPH2	Q6IBW4	605 aa		9.44	□□□□□ -0.9
CTNNA1-231	ENST00000521941	FAM109B	Q6ICB4	259 aa	Predicted RBP	9.44	□□□□□ -0.9
CTNNA1-231	ENST00000521941	MOXD1	Q6UVY6	613 aa		9.44	□□□□□ -0.9
CTNNA1-231	ENST00000521941		Q7L0L9	218 aa		9.44	□□□□□ -0.9
CTNNA1-231	ENST00000521941	SMAP1	Q8IYB5	467 aa	Predicted RBP	9.44	□□□□□ -0.9
CTNNA1-231	ENST00000521941	ETNPPL	Q8TBG4	499 aa		9.44	□□□□□ -0.9
CTNNA1-231	ENST00000521941	TNFRSF25	Q93038	417 aa		9.44	□□□□□ -0.9
CTNNA1-231	ENST00000521941	FAM161B	Q96MY7	647 aa		9.44	□□□□□ -0.9
CTNNA1-231	ENST00000521941	MTIF3	Q9H2K0	278 aa	Known RBP	9.44	□□□□□ -0.9
CTNNA1-231	ENST00000521941	CXXC1	Q9P0U4	656 aa	Predicted RBP	9.44	□□□□□ -0.9
CTNNA1-231	ENST00000521941	SMC3	Q9UQE7	1217 aa		9.44	□□□□□ -0.9
CTNNA1-231	ENST00000521941	PCDHA10	Q9Y5I2	948 aa		9.44	□□□□□ -0.9
CTNNA1-231	ENST00000521941	EVPL	Q92817	2033 aa		9.43	□□□□□ -0.9
CTNNA1-231	ENST00000521941	PTPRS	Q13332	1948 aa		9.43	□□□□□ -0.9
CTNNA1-231	ENST00000521941	LOXHD1	Q8IVV2	1947 aa		9.43	□□□□□ -0.9
CTNNA1-231	ENST00000521941	IGSF9B	Q9UPX0	1349 aa		9.43	□□□□□ -0.9
CTNNA1-231	ENST00000521941	IGKV6D-21	A0A0A0MT36	114 aa		9.43	□□□□□ -0.9
CTNNA1-231	ENST00000521941	GRXCR1	A8MXD5	290 aa		9.43	□□□□□ -0.9
CTNNA1-231	ENST00000521941	RSPH10B2	B2RC85	870 aa		9.43	□□□□□ -0.9
CTNNA1-231	ENST00000521941	KIF28P	B7ZC32	967 aa		9.43	□□□□□ -0.9
CTNNA1-231	ENST00000521941	HBP1	O60381	514 aa		9.43	□□□□□ -0.9
CTNNA1-231	ENST00000521941	NEMF	O60524	1076 aa		9.43	□□□□□ -0.9
CTNNA1-231	ENST00000521941	NBN	O60934	754 aa		9.43	□□□□□ -0.9
CTNNA1-231	ENST00000521941	PSMD10	O75832	226 aa		9.43	□□□□□ -0.9
CTNNA1-231	ENST00000521941	PFKM	P08237	780 aa		9.43	□□□□□ -0.9
CTNNA1-231	ENST00000521941	RSPH10B	P0C881	870 aa		9.43	□□□□□ -0.9
CTNNA1-231	ENST00000521941	ACTN1	P12814	892 aa		9.43	□□□□□ -0.9
CTNNA1-231	ENST00000521941	MCM7	P33993	719 aa		9.43	□□□□□ -0.9
CTNNA1-231	ENST00000521941	RFC2	P35250	354 aa		9.43	□□□□□ -0.9
CTNNA1-231	ENST00000521941	JAK3	P52333	1124 aa		9.43	□□□□□ -0.9
CTNNA1-231	ENST00000521941	PRKCE	Q02156	737 aa		9.43	□□□□□ -0.9
CTNNA1-231	ENST00000521941	TMEM62	Q0P6H9	643 aa		9.43	□□□□□ -0.9
CTNNA1-231	ENST00000521941	MCTP1	Q6DN14	999 aa		9.43	□□□□□ -0.9
CTNNA1-231	ENST00000521941	PLPPR4	Q7Z2D5	763 aa		9.43	□□□□□ -0.9

Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms