RNA–Protein interactions for RNA: ENST00000521724.5

CTNNA1-230, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 2,741 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-230ENST00000521724 LRRC4CQ9HCJ2 640 aa10.49□□□□□ -0.73
CTNNA1-230ENST00000521724 IRAK4Q9NWZ3 460 aa10.49□□□□□ -0.73
CTNNA1-230ENST00000521724 ZFATQ9P243 1243 aa10.49□□□□□ -0.73
CTNNA1-230ENST00000521724 AMACRQ9UHK6 382 aa10.49□□□□□ -0.73
CTNNA1-230ENST00000521724 GGT7Q9UJ14 662 aa10.49□□□□□ -0.73
CTNNA1-230ENST00000521724 COL5A2P05997 1499 aaPredicted RBP10.48□□□□□ -0.73
CTNNA1-230ENST00000521724 ZNF335Q9H4Z2 1342 aaPredicted RBP10.48□□□□□ -0.73
CTNNA1-230ENST00000521724 SMIM24O75264 130 aa10.48□□□□□ -0.73
CTNNA1-230ENST00000521724 UBOX5O94941 541 aa10.48□□□□□ -0.73
CTNNA1-230ENST00000521724 GNAT2P19087 354 aa10.48□□□□□ -0.73
CTNNA1-230ENST00000521724 FGFR2P21802 821 aa10.48□□□□□ -0.73
CTNNA1-230ENST00000521724 KIF5BP33176 963 aa10.48□□□□□ -0.73
CTNNA1-230ENST00000521724 PAPOLAP51003 745 aaKnown RBP10.48□□□□□ -0.73
CTNNA1-230ENST00000521724 IFI16Q16666 785 aaKnown RBP10.48□□□□□ -0.73
CTNNA1-230ENST00000521724 C4orf32Q8N8J7 132 aa10.48□□□□□ -0.73
CTNNA1-230ENST00000521724 SCFD2Q8WU76 684 aa10.48□□□□□ -0.73
CTNNA1-230ENST00000521724 TBC1D5Q92609 795 aa10.48□□□□□ -0.73
CTNNA1-230ENST00000521724 ANKS1AQ92625 1134 aa10.48□□□□□ -0.73
CTNNA1-230ENST00000521724 TRIM9Q9C026 710 aa10.48□□□□□ -0.73
CTNNA1-230ENST00000521724 TANGO6Q9C0B7 1094 aa10.48□□□□□ -0.73
CTNNA1-230ENST00000521724 ECT2Q9H8V3 914 aa10.48□□□□□ -0.73
CTNNA1-230ENST00000521724 PAPOLBQ9NRJ5 636 aaKnown RBP10.48□□□□□ -0.73
CTNNA1-230ENST00000521724 INTS9Q9NV88 658 aaKnown RBP10.48□□□□□ -0.73
CTNNA1-230ENST00000521724 SHANK3Q9BYB0 1731 aa10.48□□□□□ -0.73
CTNNA1-230ENST00000521724 TOGARAM1Q9Y4F4 1720 aa10.48□□□□□ -0.73
CTNNA1-230ENST00000521724 PAPPAQ13219 1627 aa10.48□□□□□ -0.73
CTNNA1-230ENST00000521724 TLDC2A0PJX2 215 aa10.48□□□□□ -0.73
CTNNA1-230ENST00000521724 A6NHS1 94 aa10.48□□□□□ -0.73
CTNNA1-230ENST00000521724 STXBP3O00186 592 aa10.48□□□□□ -0.73
CTNNA1-230ENST00000521724 KRIT1O00522 736 aa10.48□□□□□ -0.73
CTNNA1-230ENST00000521724 UPP2O95045 317 aa10.48□□□□□ -0.73
CTNNA1-230ENST00000521724 SERPING1P05155 500 aa10.48□□□□□ -0.73
CTNNA1-230ENST00000521724 ATP4AP20648 1035 aa10.48□□□□□ -0.73
CTNNA1-230ENST00000521724 CTCFP49711 727 aaPredicted RBP10.48□□□□□ -0.73
CTNNA1-230ENST00000521724 BCAMP50895 628 aa10.48□□□□□ -0.73
CTNNA1-230ENST00000521724 NCALDP61601 193 aa10.48□□□□□ -0.73
CTNNA1-230ENST00000521724 ATP11AP98196 1134 aa10.48□□□□□ -0.73
CTNNA1-230ENST00000521724 ARID5AQ03989 594 aa10.48□□□□□ -0.73
CTNNA1-230ENST00000521724 SEPT2Q15019 361 aa10.48□□□□□ -0.73
CTNNA1-230ENST00000521724 TAF11Q15544 211 aa10.48□□□□□ -0.73
CTNNA1-230ENST00000521724 ENOX2Q16206 610 aaKnown RBP10.48□□□□□ -0.73
CTNNA1-230ENST00000521724 SFMBT2Q5VUG0 894 aa10.48□□□□□ -0.73
CTNNA1-230ENST00000521724 SPATA5Q8NB90 893 aa10.48□□□□□ -0.73
CTNNA1-230ENST00000521724 ZSCAN10Q96SZ4 725 aaPredicted RBP10.48□□□□□ -0.73
CTNNA1-230ENST00000521724 PRMT1Q99873 361 aaKnown RBP10.48□□□□□ -0.73
CTNNA1-230ENST00000521724 NSRP1Q9H0G5 558 aaKnown RBP10.48□□□□□ -0.73
CTNNA1-230ENST00000521724 CD2APQ9Y5K6 639 aa10.48□□□□□ -0.73
CTNNA1-230ENST00000521724 TIAM2Q8IVF5 1701 aa10.47□□□□□ -0.73
CTNNA1-230ENST00000521724 A8MUI8 341 aa10.47□□□□□ -0.73
CTNNA1-230ENST00000521724 PGRMC1O00264 195 aaKnown RBP10.47□□□□□ -0.73
CTNNA1-230ENST00000521724 CES2O00748 559 aa10.47□□□□□ -0.73
CTNNA1-230ENST00000521724 UQCRFS1P1P0C7P4 283 aa10.47□□□□□ -0.73
CTNNA1-230ENST00000521724 RARAP10276 462 aa10.47□□□□□ -0.73
CTNNA1-230ENST00000521724 SCG2P13521 617 aa10.47□□□□□ -0.73
CTNNA1-230ENST00000521724 MLLT3P42568 568 aaPredicted RBP10.47□□□□□ -0.73
CTNNA1-230ENST00000521724 ABL2P42684 1182 aa10.47□□□□□ -0.73
CTNNA1-230ENST00000521724 LACTBP83111 547 aaPredicted RBP10.47□□□□□ -0.73
CTNNA1-230ENST00000521724 PDCD2Q16342 344 aaPredicted RBP10.47□□□□□ -0.73
CTNNA1-230ENST00000521724 SLC18A3Q16572 532 aa10.47□□□□□ -0.73
CTNNA1-230ENST00000521724 PTPROQ16827 1216 aa10.47□□□□□ -0.73
CTNNA1-230ENST00000521724 TRIM68Q6AZZ1 485 aa10.47□□□□□ -0.73
CTNNA1-230ENST00000521724 CNNM4Q6P4Q7 775 aa10.47□□□□□ -0.73
CTNNA1-230ENST00000521724 ATXN2LQ8WWM7 1075 aaKnown RBP10.47□□□□□ -0.73
CTNNA1-230ENST00000521724 SREK1Q8WXA9 508 aaKnown RBP10.47□□□□□ -0.73
CTNNA1-230ENST00000521724 HPS3Q969F9 1004 aa10.47□□□□□ -0.73
CTNNA1-230ENST00000521724 NAF1Q96HR8 494 aaKnown RBP10.47□□□□□ -0.73
CTNNA1-230ENST00000521724 PBKQ96KB5 322 aa10.47□□□□□ -0.73
CTNNA1-230ENST00000521724 DPH5Q9H2P9 285 aa10.47□□□□□ -0.73
CTNNA1-230ENST00000521724 SEMA6BQ9H3T3 888 aa10.47□□□□□ -0.73
CTNNA1-230ENST00000521724 ADAMTS1Q9UHI8 967 aa10.47□□□□□ -0.73
CTNNA1-230ENST00000521724 UTP11Q9Y3A2 253 aaKnown RBP10.47□□□□□ -0.73
CTNNA1-230ENST00000521724 ADAMTS3O15072 1205 aa10.47□□□□□ -0.73
CTNNA1-230ENST00000521724 MSH2P43246 934 aa10.47□□□□□ -0.73
CTNNA1-230ENST00000521724 IFNAR2P48551 515 aa10.47□□□□□ -0.73
CTNNA1-230ENST00000521724 ZNF131P52739 623 aa10.47□□□□□ -0.73
CTNNA1-230ENST00000521724 TMTC3Q6ZXV5 915 aa10.47□□□□□ -0.73
CTNNA1-230ENST00000521724 ADGRA1Q86SQ6 560 aa10.47□□□□□ -0.73
CTNNA1-230ENST00000521724 KIF2BQ8N4N8 673 aa10.47□□□□□ -0.73
CTNNA1-230ENST00000521724 ACTRT1Q8TDG2 376 aa10.47□□□□□ -0.73
CTNNA1-230ENST00000521724 ITFG2Q969R8 447 aa10.47□□□□□ -0.73
CTNNA1-230ENST00000521724 MOV10L1Q9BXT6 1211 aaKnown RBP10.47□□□□□ -0.73
CTNNA1-230ENST00000521724 PACSIN1Q9BY11 444 aa10.47□□□□□ -0.73
CTNNA1-230ENST00000521724 CCSER1Q9C0I3 900 aa10.47□□□□□ -0.73
CTNNA1-230ENST00000521724 GOLPH3Q9H4A6 298 aa10.47□□□□□ -0.73
CTNNA1-230ENST00000521724 GOPCQ9HD26 462 aa10.47□□□□□ -0.73
CTNNA1-230ENST00000521724 A0A087X0T9 212 aa10.46□□□□□ -0.73
CTNNA1-230ENST00000521724 RBM47A0AV96 593 aaKnown RBP10.46□□□□□ -0.73
CTNNA1-230ENST00000521724 SMIM23A6NLE4 172 aa10.46□□□□□ -0.73
CTNNA1-230ENST00000521724 CCDC188H7C350 402 aa10.46□□□□□ -0.73
CTNNA1-230ENST00000521724 TTI1O43156 1089 aa10.46□□□□□ -0.73
CTNNA1-230ENST00000521724 FGFR1OPO95684 399 aaKnown RBP10.46□□□□□ -0.73
CTNNA1-230ENST00000521724 KRT16P08779 473 aa10.46□□□□□ -0.73
CTNNA1-230ENST00000521724 FAM228BP0C875 321 aa10.46□□□□□ -0.73
CTNNA1-230ENST00000521724 CALM1P0DP23 149 aa10.46□□□□□ -0.73
CTNNA1-230ENST00000521724 CALM2P0DP24 149 aa10.46□□□□□ -0.73
CTNNA1-230ENST00000521724 CALM3P0DP25 149 aa10.46□□□□□ -0.73
CTNNA1-230ENST00000521724 CYP19A1P11511 503 aaPredicted RBP10.46□□□□□ -0.73
CTNNA1-230ENST00000521724 FERP16591 822 aa10.46□□□□□ -0.73
CTNNA1-230ENST00000521724 PLCG1P19174 1290 aa10.46□□□□□ -0.73
CTNNA1-230ENST00000521724 MMP13P45452 471 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms