RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 BHMT2Q9H2M3 363 aa17.56■□□□□ 0.4
USP42-207ENST00000521713 LMNB1P20700 586 aa17.56■□□□□ 0.4
USP42-207ENST00000521713 SMIM5Q71RC9 77 aa17.56■□□□□ 0.4
USP42-207ENST00000521713 SNX25Q9H3E2 840 aa17.56■□□□□ 0.4
USP42-207ENST00000521713 SPTLC3Q9NUV7 552 aa17.56■□□□□ 0.4
USP42-207ENST00000521713 SPATA31D1Q6ZQQ2 1576 aa17.56■□□□□ 0.4
USP42-207ENST00000521713 TOB2Q14106 344 aaPredicted RBP17.56■□□□□ 0.4
USP42-207ENST00000521713 HSP90AA5PQ58FG0 334 aa17.56■□□□□ 0.4
USP42-207ENST00000521713 CCDC170Q8IYT3 715 aa17.56■□□□□ 0.4
USP42-207ENST00000521713 PCDHB4Q9Y5E5 795 aa17.56■□□□□ 0.4
USP42-207ENST00000521713 CDC25AP30304 524 aa17.55■□□□□ 0.4
USP42-207ENST00000521713 STAT3P40763 770 aa17.55■□□□□ 0.4
USP42-207ENST00000521713 LRRC41Q15345 812 aa17.55■□□□□ 0.4
USP42-207ENST00000521713 SGMS1Q86VZ5 419 aa17.55■□□□□ 0.4
USP42-207ENST00000521713 RFC1P35251 1148 aaPredicted RBP17.55■□□□□ 0.4
USP42-207ENST00000521713 CACNB1Q02641 598 aaPredicted RBP17.55■□□□□ 0.4
USP42-207ENST00000521713 GABPAQ06546 454 aa17.55■□□□□ 0.4
USP42-207ENST00000521713 RPS12P25398 132 aaKnown RBP17.55■□□□□ 0.4
USP42-207ENST00000521713 TFAMQ00059 246 aaKnown RBP17.55■□□□□ 0.4
USP42-207ENST00000521713 TTLL4Q14679 1199 aa17.55■□□□□ 0.4
USP42-207ENST00000521713 RSBN1LQ6PCB5 846 aaPredicted RBP17.55■□□□□ 0.4
USP42-207ENST00000521713 SMC1BQ8NDV3 1235 aa17.55■□□□□ 0.4
USP42-207ENST00000521713 TRIM31Q9BZY9 425 aa17.55■□□□□ 0.4
USP42-207ENST00000521713 VCX3AQ9NNX9 186 aa17.55■□□□□ 0.4
USP42-207ENST00000521713 CD2BP2O95400 341 aaKnown RBP17.55■□□□□ 0.4
USP42-207ENST00000521713 SFNP31947 248 aa17.55■□□□□ 0.4
USP42-207ENST00000521713 MAGEA9P43362 315 aa17.55■□□□□ 0.4
USP42-207ENST00000521713 ARHGAP4P98171 946 aa17.55■□□□□ 0.4
USP42-207ENST00000521713 MYO1EQ12965 1108 aa17.55■□□□□ 0.4
USP42-207ENST00000521713 SLMAPQ14BN4 828 aa17.55■□□□□ 0.4
USP42-207ENST00000521713 QRICH1Q2TAL8 776 aa17.55■□□□□ 0.4
USP42-207ENST00000521713 AKR1B1P15121 316 aa17.54■□□□□ 0.4
USP42-207ENST00000521713 SBK1Q52WX2 424 aa17.54■□□□□ 0.4
USP42-207ENST00000521713 KIAA1841Q6NSI8 718 aa17.54■□□□□ 0.4
USP42-207ENST00000521713 MAP7D3Q8IWC1 876 aa17.54■□□□□ 0.4
USP42-207ENST00000521713 AFAP1L2Q8N4X5 818 aa17.54■□□□□ 0.4
USP42-207ENST00000521713 THEGQ9P2T0 379 aa17.54■□□□□ 0.4
USP42-207ENST00000521713 TTLL3Q9Y4R7 772 aa17.54■□□□□ 0.4
USP42-207ENST00000521713 FCER1AP12319 257 aa17.54■□□□□ 0.4
USP42-207ENST00000521713 PRELPP51888 382 aa17.54■□□□□ 0.4
USP42-207ENST00000521713 CTTNQ14247 550 aaKnown RBP17.54■□□□□ 0.4
USP42-207ENST00000521713 PSMB7Q99436 277 aa17.54■□□□□ 0.4
USP42-207ENST00000521713 RWDD2AQ9UIY3 292 aa17.54■□□□□ 0.4
USP42-207ENST00000521713 ICE2Q659A1 982 aa17.54■□□□□ 0.4
USP42-207ENST00000521713 RSAD2Q8WXG1 361 aa17.54■□□□□ 0.4
USP42-207ENST00000521713 HACL1Q9UJ83 578 aa17.54■□□□□ 0.4
USP42-207ENST00000521713 LDHAP00338 332 aaKnown RBP17.54■□□□□ 0.4
USP42-207ENST00000521713 LRRC63Q05C16 580 aa17.54■□□□□ 0.4
USP42-207ENST00000521713 LPAR1Q92633 364 aa17.54■□□□□ 0.4
USP42-207ENST00000521713 PXDNLA1KZ92 1463 aa17.53■□□□□ 0.4
USP42-207ENST00000521713 MXI1P50539 228 aa17.53■□□□□ 0.4
USP42-207ENST00000521713 EP400NLQ6ZTU2 488 aa17.53■□□□□ 0.4
USP42-207ENST00000521713 ENOX1Q8TC92 643 aaKnown RBP17.53■□□□□ 0.4
USP42-207ENST00000521713 BARHL2Q9NY43 387 aa17.53■□□□□ 0.4
USP42-207ENST00000521713 NMT2O60551 498 aa17.53■□□□□ 0.4
USP42-207ENST00000521713 EPHB4P54760 987 aa17.53■□□□□ 0.4
USP42-207ENST00000521713 USP17L6PQ6QN14 398 aa17.53■□□□□ 0.4
USP42-207ENST00000521713 MMS22LQ6ZRQ5 1243 aa17.53■□□□□ 0.4
USP42-207ENST00000521713 GRK7Q8WTQ7 553 aa17.53■□□□□ 0.4
USP42-207ENST00000521713 TSGA10IPQ3SY00 556 aa17.53■□□□□ 0.4
USP42-207ENST00000521713 CCT6BQ92526 530 aa17.53■□□□□ 0.4
USP42-207ENST00000521713 MAN1B1Q9UKM7 699 aa17.53■□□□□ 0.4
USP42-207ENST00000521713 STK38LQ9Y2H1 464 aa17.53■□□□□ 0.4
USP42-207ENST00000521713 EPN1Q9Y6I3 576 aaPredicted RBP17.53■□□□□ 0.4
USP42-207ENST00000521713 C19orf81C9J6K1 198 aa17.53■□□□□ 0.4
USP42-207ENST00000521713 MYO1FO00160 1098 aa17.53■□□□□ 0.4
USP42-207ENST00000521713 CASC4Q6P4E1 433 aa17.53■□□□□ 0.4
USP42-207ENST00000521713 CATSPER4Q7RTX7 472 aa17.53■□□□□ 0.4
USP42-207ENST00000521713 ZNF579Q8NAF0 562 aaKnown RBP17.53■□□□□ 0.4
USP42-207ENST00000521713 CCDC197Q8NCU1 140 aa17.53■□□□□ 0.4
USP42-207ENST00000521713 NLRP4Q96MN2 994 aa17.53■□□□□ 0.4
USP42-207ENST00000521713 TACO1Q9BSH4 297 aaKnown RBP17.53■□□□□ 0.4
USP42-207ENST00000521713 FTOQ9C0B1 505 aaKnown RBP eCLIP17.53■□□□□ 0.4
USP42-207ENST00000521713 RPF1Q9H9Y2 349 aaKnown RBP17.53■□□□□ 0.4
USP42-207ENST00000521713 USP32Q8NFA0 1604 aa17.52■□□□□ 0.4
USP42-207ENST00000521713 CLIC2O15247 247 aa17.52■□□□□ 0.4
USP42-207ENST00000521713 SRGAP2CP0DJJ0 459 aa17.52■□□□□ 0.4
USP42-207ENST00000521713 ZBTB17Q13105 803 aa17.52■□□□□ 0.4
USP42-207ENST00000521713 RSRC2Q7L4I2 434 aaKnown RBP17.52■□□□□ 0.4
USP42-207ENST00000521713 ATP6V0A4Q9HBG4 840 aa17.52■□□□□ 0.4
USP42-207ENST00000521713 GIPC1O14908 333 aa17.52■□□□□ 0.4
USP42-207ENST00000521713 SUN1O94901 812 aa17.52■□□□□ 0.4
USP42-207ENST00000521713 OATP04181 439 aa17.52■□□□□ 0.4
USP42-207ENST00000521713 FBXO33Q7Z6M2 555 aa17.52■□□□□ 0.4
USP42-207ENST00000521713 FAM151AQ8WW52 585 aa17.52■□□□□ 0.4
USP42-207ENST00000521713 EEF2KMTQ96G04 330 aa17.52■□□□□ 0.4
USP42-207ENST00000521713 PCIF1Q9H4Z3 704 aa17.52■□□□□ 0.4
USP42-207ENST00000521713 PREX1Q8TCU6 1659 aa17.52■□□□□ 0.39
USP42-207ENST00000521713 ASB14A6NK59 587 aa17.52■□□□□ 0.39
USP42-207ENST00000521713 MYL3P08590 195 aa17.52■□□□□ 0.39
USP42-207ENST00000521713 KRT15P19012 456 aa17.52■□□□□ 0.39
USP42-207ENST00000521713 MARK3P27448 753 aa17.52■□□□□ 0.39
USP42-207ENST00000521713 IFRD2Q12894 506 aaPredicted RBP17.52■□□□□ 0.39
USP42-207ENST00000521713 ZKSCAN8Q15776 578 aaPredicted RBP17.52■□□□□ 0.39
USP42-207ENST00000521713 GSDMBQ8TAX9 411 aa17.52■□□□□ 0.39
USP42-207ENST00000521713 PAGE5Q96GU1 130 aa17.52■□□□□ 0.39
USP42-207ENST00000521713 EPSTI1Q96J88 318 aa17.52■□□□□ 0.39
USP42-207ENST00000521713 MMP19Q99542 508 aa17.52■□□□□ 0.39
USP42-207ENST00000521713 ALDH8A1Q9H2A2 487 aaPredicted RBP17.52■□□□□ 0.39
USP42-207ENST00000521713 ZNF233A6NK53 670 aa17.52■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms