RNA–Protein interactions for RNA: ENST00000521621.5

CLK4-209, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 2,780 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-209ENST00000521621 MUTP22033 750 aa10.7□□□□□ -0.7
CLK4-209ENST00000521621 NME8Q8N427 588 aa10.7□□□□□ -0.7
CLK4-209ENST00000521621 NEK9Q8TD19 979 aa10.7□□□□□ -0.7
CLK4-209ENST00000521621 OXER1Q8TDS5 423 aa10.7□□□□□ -0.7
CLK4-209ENST00000521621 ATP8B4Q8TF62 1192 aa10.7□□□□□ -0.7
CLK4-209ENST00000521621 DHX38Q92620 1227 aaKnown RBP10.7□□□□□ -0.7
CLK4-209ENST00000521621 WNT8AQ9H1J5 351 aa10.7□□□□□ -0.7
CLK4-209ENST00000521621 VAV3Q9UKW4 847 aa10.7□□□□□ -0.7
CLK4-209ENST00000521621 STK24Q9Y6E0 443 aa10.7□□□□□ -0.7
CLK4-209ENST00000521621 KDM3AQ9Y4C1 1321 aa10.7□□□□□ -0.7
CLK4-209ENST00000521621 LAD1O00515 517 aa10.7□□□□□ -0.7
CLK4-209ENST00000521621 EFCAB14O75071 495 aa10.7□□□□□ -0.7
CLK4-209ENST00000521621 SELPP16109 830 aa10.7□□□□□ -0.7
CLK4-209ENST00000521621 STAT5BP51692 787 aa10.7□□□□□ -0.7
CLK4-209ENST00000521621 PLCB4Q15147 1175 aa10.7□□□□□ -0.7
CLK4-209ENST00000521621 KCTD17Q8N5Z5 321 aa10.7□□□□□ -0.7
CLK4-209ENST00000521621 MTMR9Q96QG7 549 aa10.7□□□□□ -0.7
CLK4-209ENST00000521621 UBE2OQ9C0C9 1292 aaKnown RBP10.7□□□□□ -0.7
CLK4-209ENST00000521621 TRMT13Q9NUP7 481 aaKnown RBP10.7□□□□□ -0.7
CLK4-209ENST00000521621 PCDHA2Q9Y5H9 948 aa10.7□□□□□ -0.7
CLK4-209ENST00000521621 SIP14410 1827 aa10.69□□□□□ -0.7
CLK4-209ENST00000521621 SLC26A4O43511 780 aa10.69□□□□□ -0.7
CLK4-209ENST00000521621 LYPLA2O95372 231 aa10.69□□□□□ -0.7
CLK4-209ENST00000521621 CD2BP2O95400 341 aaKnown RBP10.69□□□□□ -0.7
CLK4-209ENST00000521621 IQCF3P0C7M6 154 aa10.69□□□□□ -0.7
CLK4-209ENST00000521621 SMAD3P84022 425 aaKnown RBP10.69□□□□□ -0.7
CLK4-209ENST00000521621 INF2Q27J81 1249 aa10.69□□□□□ -0.7
CLK4-209ENST00000521621 CHRDL2Q6WN34 429 aa10.69□□□□□ -0.7
CLK4-209ENST00000521621 FAM184AQ8NB25 1140 aa10.69□□□□□ -0.7
CLK4-209ENST00000521621 RETREG2Q8NC44 543 aa10.69□□□□□ -0.7
CLK4-209ENST00000521621 VWCEQ96DN2 955 aa10.69□□□□□ -0.7
CLK4-209ENST00000521621 NIFKQ9BYG3 293 aaKnown RBP10.69□□□□□ -0.7
CLK4-209ENST00000521621 ZNF302Q9NR11 478 aa10.69□□□□□ -0.7
CLK4-209ENST00000521621 CEP131Q9UPN4 1083 aa10.69□□□□□ -0.7
CLK4-209ENST00000521621 SMIM35A0A1B0GVV1 85 aa10.69□□□□□ -0.7
CLK4-209ENST00000521621 BTBD18B2RXH4 712 aa10.69□□□□□ -0.7
CLK4-209ENST00000521621 BAG4O95429 457 aaKnown RBP10.69□□□□□ -0.7
CLK4-209ENST00000521621 MKRN4PQ13434 485 aaPredicted RBP10.69□□□□□ -0.7
CLK4-209ENST00000521621 HIC1Q14526 733 aa10.69□□□□□ -0.7
CLK4-209ENST00000521621 MARCH8Q5T0T0 291 aa10.69□□□□□ -0.7
CLK4-209ENST00000521621 LRCH2Q5VUJ6 765 aa10.69□□□□□ -0.7
CLK4-209ENST00000521621 PIK3AP1Q6ZUJ8 805 aa10.69□□□□□ -0.7
CLK4-209ENST00000521621 NOSTRINQ8IVI9 506 aa10.69□□□□□ -0.7
CLK4-209ENST00000521621 EXOC8Q8IYI6 725 aa10.69□□□□□ -0.7
CLK4-209ENST00000521621 HAS1Q92839 578 aa10.69□□□□□ -0.7
CLK4-209ENST00000521621 ZFP91Q96JP5 570 aaPredicted RBP10.69□□□□□ -0.7
CLK4-209ENST00000521621 RNPEPQ9H4A4 650 aa10.69□□□□□ -0.7
CLK4-209ENST00000521621 GAS7O60861 476 aa10.68□□□□□ -0.7
CLK4-209ENST00000521621 TDP2O95551 362 aa10.68□□□□□ -0.7
CLK4-209ENST00000521621 SPIRE1Q08AE8 756 aa10.68□□□□□ -0.7
CLK4-209ENST00000521621 LINC01465Q8N7H1 131 aa10.68□□□□□ -0.7
CLK4-209ENST00000521621 PHOSPHO2Q8TCD6 241 aa10.68□□□□□ -0.7
CLK4-209ENST00000521621 LMBR1Q8WVP7 490 aa10.68□□□□□ -0.7
CLK4-209ENST00000521621 LOXHD1Q8IVV2 1947 aa10.68□□□□□ -0.7
CLK4-209ENST00000521621 CKBP12277 381 aa10.68□□□□□ -0.7
CLK4-209ENST00000521621 SYN1P17600 705 aa10.68□□□□□ -0.7
CLK4-209ENST00000521621 PDCP20941 246 aa10.68□□□□□ -0.7
CLK4-209ENST00000521621 MGAT3Q09327 533 aa10.68□□□□□ -0.7
CLK4-209ENST00000521621 EPHA7Q15375 998 aa10.68□□□□□ -0.7
CLK4-209ENST00000521621 GRIK4Q16099 956 aa10.68□□□□□ -0.7
CLK4-209ENST00000521621 EARS2Q5JPH6 523 aaKnown RBP10.68□□□□□ -0.7
CLK4-209ENST00000521621 TMEM240Q5SV17 173 aa10.68□□□□□ -0.7
CLK4-209ENST00000521621 USP38Q8NB14 1042 aa10.68□□□□□ -0.7
CLK4-209ENST00000521621 UNC45AQ9H3U1 944 aa10.68□□□□□ -0.7
CLK4-209ENST00000521621 PRDM5Q9NQX1 630 aaPredicted RBP10.68□□□□□ -0.7
CLK4-209ENST00000521621 DISC1Q9NRI5 854 aa10.68□□□□□ -0.7
CLK4-209ENST00000521621 ARID2Q68CP9 1835 aa10.68□□□□□ -0.7
CLK4-209ENST00000521621 MAGEB2O15479 319 aa10.67□□□□□ -0.7
CLK4-209ENST00000521621 SLC37A4O43826 429 aa10.67□□□□□ -0.7
CLK4-209ENST00000521621 STBD1O95210 358 aa10.67□□□□□ -0.7
CLK4-209ENST00000521621 XRCC6P12956 609 aaKnown RBP eCLIP10.67□□□□□ -0.7
CLK4-209ENST00000521621 PRPHP41219 470 aa10.67□□□□□ -0.7
CLK4-209ENST00000521621 CDC42EP1Q00587 391 aa10.67□□□□□ -0.7
CLK4-209ENST00000521621 PPFIA1Q13136 1202 aa10.67□□□□□ -0.7
CLK4-209ENST00000521621 NR5A1Q13285 461 aa10.67□□□□□ -0.7
CLK4-209ENST00000521621 TARBP2Q15633 366 aaKnown RBP10.67□□□□□ -0.7
CLK4-209ENST00000521621 LRRC8DQ7L1W4 858 aa10.67□□□□□ -0.7
CLK4-209ENST00000521621 C16orf59Q7L2K0 433 aa10.67□□□□□ -0.7
CLK4-209ENST00000521621 CCDC60Q8IWA6 550 aaPredicted RBP10.67□□□□□ -0.7
CLK4-209ENST00000521621 APBB2Q92870 758 aa10.67□□□□□ -0.7
CLK4-209ENST00000521621 ATP6V0A1Q93050 837 aa10.67□□□□□ -0.7
CLK4-209ENST00000521621 MTIF3Q9H2K0 278 aaKnown RBP10.67□□□□□ -0.7
CLK4-209ENST00000521621 NOL7Q9UMY1 257 aaKnown RBP10.67□□□□□ -0.7
CLK4-209ENST00000521621 TELO2Q9Y4R8 837 aa10.67□□□□□ -0.7
CLK4-209ENST00000521621 POTEB3A0JP26 581 aa10.67□□□□□ -0.7
CLK4-209ENST00000521621 ZBTB42B2RXF5 422 aa10.67□□□□□ -0.7
CLK4-209ENST00000521621 CCNT1O60563 726 aaKnown RBP10.67□□□□□ -0.7
CLK4-209ENST00000521621 ATP4AP20648 1035 aa10.67□□□□□ -0.7
CLK4-209ENST00000521621 LETM2Q2VYF4 491 aa10.67□□□□□ -0.7
CLK4-209ENST00000521621 POTEBQ6S5H4 581 aa10.67□□□□□ -0.7
CLK4-209ENST00000521621 RSPH3Q86UC2 560 aa10.67□□□□□ -0.7
CLK4-209ENST00000521621 NRBP2Q9NSY0 501 aa10.67□□□□□ -0.7
CLK4-209ENST00000521621 GJB4Q9NTQ9 266 aa10.67□□□□□ -0.7
CLK4-209ENST00000521621 K7ELQ4 463 aaPredicted RBP10.66□□□□□ -0.7
CLK4-209ENST00000521621 ACTN1P12814 892 aa10.66□□□□□ -0.7
CLK4-209ENST00000521621 GPNMBQ14956 572 aa10.66□□□□□ -0.7
CLK4-209ENST00000521621 FAM47CQ5HY64 1035 aa10.66□□□□□ -0.7
CLK4-209ENST00000521621 UTP14CQ5TAP6 766 aaKnown RBP10.66□□□□□ -0.7
CLK4-209ENST00000521621 CNKSR3Q6P9H4 555 aa10.66□□□□□ -0.7
CLK4-209ENST00000521621 C4orf19Q8IY42 314 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms