RNA–Protein interactions for RNA: ENST00000521516.5

HMBOX1-208, Transcript of homeobox containing 1, humanhuman

TSL 2

Gene HMBOX1, Length 2,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-208ENST00000521516 MGAT3Q09327 533 aa8.98□□□□□ -0.97
HMBOX1-208ENST00000521516 KCTD1Q719H9 257 aa8.98□□□□□ -0.97
HMBOX1-208ENST00000521516 OTOP3Q7RTS5 596 aa8.98□□□□□ -0.97
HMBOX1-208ENST00000521516 RTN4RL1Q86UN2 441 aaPredicted RBP8.98□□□□□ -0.97
HMBOX1-208ENST00000521516 GPR20Q99678 358 aa8.98□□□□□ -0.97
HMBOX1-208ENST00000521516 TMEM260Q9NX78 707 aa8.98□□□□□ -0.97
HMBOX1-208ENST00000521516 GNAI2P04899 355 aa8.97□□□□□ -0.97
HMBOX1-208ENST00000521516 STAG3L1P0CL83 205 aa8.97□□□□□ -0.97
HMBOX1-208ENST00000521516 ADD2P35612 726 aa8.97□□□□□ -0.97
HMBOX1-208ENST00000521516 PLCB3Q01970 1234 aa8.97□□□□□ -0.97
HMBOX1-208ENST00000521516 APOBRQ0VD83 1088 aa8.97□□□□□ -0.97
HMBOX1-208ENST00000521516 SOWAHCQ53LP3 525 aaPredicted RBP8.97□□□□□ -0.97
HMBOX1-208ENST00000521516 RARS2Q5T160 578 aaKnown RBP8.97□□□□□ -0.97
HMBOX1-208ENST00000521516 RUFY4Q6ZNE9 571 aa8.97□□□□□ -0.97
HMBOX1-208ENST00000521516 PJA1Q8NG27 643 aa8.97□□□□□ -0.97
HMBOX1-208ENST00000521516 MRPS27Q92552 414 aaKnown RBP8.97□□□□□ -0.97
HMBOX1-208ENST00000521516 TCF25Q9BQ70 676 aa8.97□□□□□ -0.97
HMBOX1-208ENST00000521516 CA14Q9ULX7 337 aa8.97□□□□□ -0.97
HMBOX1-208ENST00000521516 KIAA1217Q5T5P2 1943 aa8.97□□□□□ -0.97
HMBOX1-208ENST00000521516 TM4SF5O14894 197 aa8.97□□□□□ -0.97
HMBOX1-208ENST00000521516 GATMP50440 423 aa8.97□□□□□ -0.97
HMBOX1-208ENST00000521516 SPEM2Q0P670 501 aa8.97□□□□□ -0.97
HMBOX1-208ENST00000521516 OS9Q13438 667 aaPredicted RBP8.97□□□□□ -0.97
HMBOX1-208ENST00000521516 SLFNL1Q499Z3 407 aa8.97□□□□□ -0.97
HMBOX1-208ENST00000521516 BTNL9Q6UXG8 535 aa8.97□□□□□ -0.97
HMBOX1-208ENST00000521516 RGS22Q8NE09 1264 aa8.97□□□□□ -0.97
HMBOX1-208ENST00000521516 NEDD1Q8NHV4 660 aa8.97□□□□□ -0.97
HMBOX1-208ENST00000521516 DZANK1Q9NVP4 752 aa8.97□□□□□ -0.97
HMBOX1-208ENST00000521516 PNMA2Q9UL42 364 aa8.97□□□□□ -0.97
HMBOX1-208ENST00000521516 NOP58Q9Y2X3 529 aaKnown RBP8.97□□□□□ -0.97
HMBOX1-208ENST00000521516 SLC4A4Q9Y6R1 1079 aa8.97□□□□□ -0.97
HMBOX1-208ENST00000521516 GNAT1P11488 350 aa8.96□□□□□ -0.97
HMBOX1-208ENST00000521516 SRFP11831 508 aa8.96□□□□□ -0.97
HMBOX1-208ENST00000521516 ATP8B2P98198 1209 aa8.96□□□□□ -0.97
HMBOX1-208ENST00000521516 HSDL1Q3SXM5 330 aa8.96□□□□□ -0.97
HMBOX1-208ENST00000521516 FBXO47Q5MNV8 452 aa8.96□□□□□ -0.97
HMBOX1-208ENST00000521516 MYSM1Q5VVJ2 828 aa8.96□□□□□ -0.97
HMBOX1-208ENST00000521516 POTEDQ86YR6 584 aa8.96□□□□□ -0.97
HMBOX1-208ENST00000521516 THNSL1Q8IYQ7 743 aa8.96□□□□□ -0.97
HMBOX1-208ENST00000521516 WDFY3Q8IZQ1 3526 aa8.96□□□□□ -0.97
HMBOX1-208ENST00000521516 C12orf76Q8N812 135 aaPredicted RBP8.96□□□□□ -0.97
HMBOX1-208ENST00000521516 COLGALT1Q8NBJ5 622 aa8.96□□□□□ -0.97
HMBOX1-208ENST00000521516 SSH3Q8TE77 659 aa8.96□□□□□ -0.97
HMBOX1-208ENST00000521516 MAP4K1Q92918 833 aa8.96□□□□□ -0.97
HMBOX1-208ENST00000521516 MAF1Q9H063 256 aa8.96□□□□□ -0.97
HMBOX1-208ENST00000521516 NOB1Q9ULX3 412 aaKnown RBP8.96□□□□□ -0.97
HMBOX1-208ENST00000521516 H3BRB1 525 aa8.96□□□□□ -0.98
HMBOX1-208ENST00000521516 LAMTOR5O43504 91 aa8.96□□□□□ -0.98
HMBOX1-208ENST00000521516 CLASP2O75122 1294 aaKnown RBP8.96□□□□□ -0.98
HMBOX1-208ENST00000521516 STXBP2Q15833 593 aa8.96□□□□□ -0.98
HMBOX1-208ENST00000521516 TSHZ1Q6ZSZ6 1077 aa8.96□□□□□ -0.98
HMBOX1-208ENST00000521516 ZNF444Q8N0Y2 327 aaPredicted RBP8.96□□□□□ -0.98
HMBOX1-208ENST00000521516 IWS1Q96ST2 819 aa8.96□□□□□ -0.98
HMBOX1-208ENST00000521516 FTHL17Q9BXU8 183 aa8.96□□□□□ -0.98
HMBOX1-208ENST00000521516 TUT1Q9H6E5 874 aaKnown RBP8.96□□□□□ -0.98
HMBOX1-208ENST00000521516 ENTPD7Q9NQZ7 604 aa8.96□□□□□ -0.98
HMBOX1-208ENST00000521516 ARHGEF3Q9NR81 526 aa8.96□□□□□ -0.98
HMBOX1-208ENST00000521516 PATJQ8NI35 1801 aa8.96□□□□□ -0.98
HMBOX1-208ENST00000521516 SURF6O75683 361 aaKnown RBP8.95□□□□□ -0.98
HMBOX1-208ENST00000521516 CSTF1Q05048 431 aaKnown RBP8.95□□□□□ -0.98
HMBOX1-208ENST00000521516 LAIR1Q6GTX8 287 aa8.95□□□□□ -0.98
HMBOX1-208ENST00000521516 PRR23CQ6ZRP0 262 aa8.95□□□□□ -0.98
HMBOX1-208ENST00000521516 MRPL43Q8N983 215 aaKnown RBP8.95□□□□□ -0.98
HMBOX1-208ENST00000521516 AGO3Q9H9G7 860 aaKnown RBP8.95□□□□□ -0.98
HMBOX1-208ENST00000521516 SETD4Q9NVD3 440 aa8.95□□□□□ -0.98
HMBOX1-208ENST00000521516 PUF60Q9UHX1 559 aaKnown RBP8.95□□□□□ -0.98
HMBOX1-208ENST00000521516 DACH1Q9UI36 760 aa8.95□□□□□ -0.98
HMBOX1-208ENST00000521516 C2orf71A6NGG8 1288 aa8.95□□□□□ -0.98
HMBOX1-208ENST00000521516 GOLIM4O00461 696 aa8.95□□□□□ -0.98
HMBOX1-208ENST00000521516 RETP07949 1114 aa8.95□□□□□ -0.98
HMBOX1-208ENST00000521516 SCG2P13521 617 aa8.95□□□□□ -0.98
HMBOX1-208ENST00000521516 KCNA4P22459 653 aa8.95□□□□□ -0.98
HMBOX1-208ENST00000521516 LIMK1P53667 647 aa8.95□□□□□ -0.98
HMBOX1-208ENST00000521516 RARSP54136 660 aaKnown RBP8.95□□□□□ -0.98
HMBOX1-208ENST00000521516 STARD6P59095 220 aa8.95□□□□□ -0.98
HMBOX1-208ENST00000521516 NONOQ15233 471 aaKnown RBP eCLIP8.95□□□□□ -0.98
HMBOX1-208ENST00000521516 CSRP2Q16527 193 aa8.95□□□□□ -0.98
HMBOX1-208ENST00000521516 CELF3Q5SZQ8 465 aaKnown RBP8.95□□□□□ -0.98
HMBOX1-208ENST00000521516 KANK3Q6NY19 840 aa8.95□□□□□ -0.98
HMBOX1-208ENST00000521516 GIMAP6Q6P9H5 292 aa8.95□□□□□ -0.98
HMBOX1-208ENST00000521516 CCDC149Q6ZUS6 474 aa8.95□□□□□ -0.98
HMBOX1-208ENST00000521516 LURAP1LQ8IV03 231 aa8.95□□□□□ -0.98
HMBOX1-208ENST00000521516 STK11IPQ8N1F8 1099 aa8.95□□□□□ -0.98
HMBOX1-208ENST00000521516 SLC44A3Q8N4M1 653 aa8.95□□□□□ -0.98
HMBOX1-208ENST00000521516 NSUN6Q8TEA1 469 aaKnown RBP8.95□□□□□ -0.98
HMBOX1-208ENST00000521516 SPATA33Q96N06 139 aa8.95□□□□□ -0.98
HMBOX1-208ENST00000521516 FOXQ1Q9C009 403 aa8.95□□□□□ -0.98
HMBOX1-208ENST00000521516 ZNF287Q9HBT7 754 aa8.95□□□□□ -0.98
HMBOX1-208ENST00000521516 SEMA4GQ9NTN9 838 aa8.95□□□□□ -0.98
HMBOX1-208ENST00000521516 SPATA6Q9NWH7 488 aaPredicted RBP8.95□□□□□ -0.98
HMBOX1-208ENST00000521516 WASF3Q9UPY6 502 aa8.95□□□□□ -0.98
HMBOX1-208ENST00000521516 MRVI1Q9Y6F6 885 aa8.95□□□□□ -0.98
HMBOX1-208ENST00000521516 WDR19Q8NEZ3 1342 aa8.94□□□□□ -0.98
HMBOX1-208ENST00000521516 NRCAMQ92823 1304 aa8.94□□□□□ -0.98
HMBOX1-208ENST00000521516 AKAP13Q12802 2813 aa8.94□□□□□ -0.98
HMBOX1-208ENST00000521516 GDF9O60383 454 aa8.94□□□□□ -0.98
HMBOX1-208ENST00000521516 FOXD2O60548 495 aaPredicted RBP8.94□□□□□ -0.98
HMBOX1-208ENST00000521516 LRRN2O75325 713 aa8.94□□□□□ -0.98
HMBOX1-208ENST00000521516 PRDM1O75626 825 aa8.94□□□□□ -0.98
HMBOX1-208ENST00000521516 EIF3JO75822 258 aaKnown RBP8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms