RNA–Protein interactions for RNA: ENST00000521338.1

PCM1-214, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-214ENST00000521338 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.88□□□□□ -1.63
PCM1-214ENST00000521338 NKRFO15226 690 aaKnown RBP eCLIP4.87□□□□□ -1.63
PCM1-214ENST00000521338 CUTAO60888 179 aa4.87□□□□□ -1.63
PCM1-214ENST00000521338 COL6A2P12110 1019 aa4.87□□□□□ -1.63
PCM1-214ENST00000521338 KRT4P19013 534 aa4.87□□□□□ -1.63
PCM1-214ENST00000521338 MAP4K2Q12851 820 aa4.87□□□□□ -1.63
PCM1-214ENST00000521338 FOXL1Q12952 345 aa4.87□□□□□ -1.63
PCM1-214ENST00000521338 NFYCQ13952 458 aa4.87□□□□□ -1.63
PCM1-214ENST00000521338 ANAPC16Q96DE5 110 aa4.87□□□□□ -1.63
PCM1-214ENST00000521338 OR14A2Q96R54 314 aa4.87□□□□□ -1.63
PCM1-214ENST00000521338 CEP72Q9P209 647 aa4.87□□□□□ -1.63
PCM1-214ENST00000521338 STRIP2Q9ULQ0 834 aa4.87□□□□□ -1.63
PCM1-214ENST00000521338 DMRT1Q9Y5R6 373 aa4.87□□□□□ -1.63
PCM1-214ENST00000521338 CDC14BO60729 498 aa4.86□□□□□ -1.63
PCM1-214ENST00000521338 VAMP1P23763 118 aa4.86□□□□□ -1.63
PCM1-214ENST00000521338 COL10A1Q03692 680 aa4.86□□□□□ -1.63
PCM1-214ENST00000521338 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.86□□□□□ -1.63
PCM1-214ENST00000521338 MICAL1Q8TDZ2 1067 aa4.86□□□□□ -1.63
PCM1-214ENST00000521338 ZG16BQ96DA0 208 aa4.86□□□□□ -1.63
PCM1-214ENST00000521338 WDR26Q9H7D7 661 aa4.86□□□□□ -1.63
PCM1-214ENST00000521338 ESYT3A0FGR9 886 aa4.85□□□□□ -1.63
PCM1-214ENST00000521338 SMAD7O15105 426 aaKnown RBP4.85□□□□□ -1.63
PCM1-214ENST00000521338 DLX3O60479 287 aa4.85□□□□□ -1.63
PCM1-214ENST00000521338 ETV4P43268 484 aa4.85□□□□□ -1.63
PCM1-214ENST00000521338 ZNF568Q3ZCX4 644 aa4.85□□□□□ -1.63
PCM1-214ENST00000521338 ZMAT1Q5H9K5 638 aa4.85□□□□□ -1.63
PCM1-214ENST00000521338 RSPO2Q6UXX9 243 aaPredicted RBP4.85□□□□□ -1.63
PCM1-214ENST00000521338 MRGPRGQ86SM5 289 aa4.85□□□□□ -1.63
PCM1-214ENST00000521338 ZNF483Q8TF39 744 aaPredicted RBP4.85□□□□□ -1.63
PCM1-214ENST00000521338 SLC39A2Q9NP94 309 aa4.85□□□□□ -1.63
PCM1-214ENST00000521338 HECAQ9UBI9 543 aaPredicted RBP4.85□□□□□ -1.63
PCM1-214ENST00000521338 ADH4P08319 380 aa4.84□□□□□ -1.63
PCM1-214ENST00000521338 MAKP20794 623 aa4.84□□□□□ -1.63
PCM1-214ENST00000521338 RPS19P39019 145 aaKnown RBP4.84□□□□□ -1.63
PCM1-214ENST00000521338 RRADP55042 308 aa4.84□□□□□ -1.63
PCM1-214ENST00000521338 PPP2R2AP63151 447 aa4.84□□□□□ -1.63
PCM1-214ENST00000521338 HDLBPQ00341 1268 aaKnown RBP4.84□□□□□ -1.63
PCM1-214ENST00000521338 DBPQ10586 325 aaPredicted RBP4.84□□□□□ -1.63
PCM1-214ENST00000521338 KCTD1Q719H9 257 aa4.84□□□□□ -1.63
PCM1-214ENST00000521338 LARP4Q71RC2 724 aaKnown RBP eCLIP4.84□□□□□ -1.63
PCM1-214ENST00000521338 NT5DC4Q86YG4 428 aa4.84□□□□□ -1.63
PCM1-214ENST00000521338 ULK2Q8IYT8 1036 aa4.84□□□□□ -1.63
PCM1-214ENST00000521338 SH3RF2Q8TEC5 729 aa4.84□□□□□ -1.63
PCM1-214ENST00000521338 KCTD13Q8WZ19 329 aa4.84□□□□□ -1.63
PCM1-214ENST00000521338 VOPP1Q96AW1 172 aa4.84□□□□□ -1.63
PCM1-214ENST00000521338 SCYL1Q96KG9 808 aa4.84□□□□□ -1.63
PCM1-214ENST00000521338 CRAMP1Q96RY5 1269 aa4.84□□□□□ -1.63
PCM1-214ENST00000521338 PHF20Q9BVI0 1012 aa4.84□□□□□ -1.63
PCM1-214ENST00000521338 ZDHHC5Q9C0B5 715 aa4.84□□□□□ -1.63
PCM1-214ENST00000521338 DSEQ9UL01 958 aa4.84□□□□□ -1.63
PCM1-214ENST00000521338 NR2E1Q9Y466 385 aa4.84□□□□□ -1.63
PCM1-214ENST00000521338 ARHGAP6O43182 974 aa4.83□□□□□ -1.64
PCM1-214ENST00000521338 HIBADHP31937 336 aaKnown RBP4.83□□□□□ -1.64
PCM1-214ENST00000521338 LBX2Q6XYB7 198 aa4.83□□□□□ -1.64
PCM1-214ENST00000521338 MSL2Q9HCI7 577 aa4.83□□□□□ -1.64
PCM1-214ENST00000521338 TLR9Q9NR96 1032 aa4.83□□□□□ -1.64
PCM1-214ENST00000521338 PLA2G3Q9NZ20 509 aa4.83□□□□□ -1.64
PCM1-214ENST00000521338 A0A1W2PQU0 124 aa4.82□□□□□ -1.64
PCM1-214ENST00000521338 TCRBV5S4A2TA0A5A2 114 aa4.82□□□□□ -1.64
PCM1-214ENST00000521338 GNAT1P11488 350 aa4.82□□□□□ -1.64
PCM1-214ENST00000521338 GRK2P25098 689 aa4.82□□□□□ -1.64
PCM1-214ENST00000521338 MSX2P35548 267 aaPredicted RBP4.82□□□□□ -1.64
PCM1-214ENST00000521338 GRK3P35626 688 aa4.82□□□□□ -1.64
PCM1-214ENST00000521338 SPIRE1Q08AE8 756 aa4.82□□□□□ -1.64
PCM1-214ENST00000521338 LARP1BQ659C4 914 aaKnown RBP4.82□□□□□ -1.64
PCM1-214ENST00000521338 SPTY2D1Q68D10 685 aaPredicted RBP4.82□□□□□ -1.64
PCM1-214ENST00000521338 DPY19L2P1Q6NXN4 242 aa4.82□□□□□ -1.64
PCM1-214ENST00000521338 KCNT2Q6UVM3 1135 aa4.82□□□□□ -1.64
PCM1-214ENST00000521338 SCUBE1Q8IWY4 988 aa4.82□□□□□ -1.64
PCM1-214ENST00000521338 GPR135Q8IZ08 494 aa4.82□□□□□ -1.64
PCM1-214ENST00000521338 CLIP3Q96DZ5 547 aa4.82□□□□□ -1.64
PCM1-214ENST00000521338 KCNJ15Q99712 375 aa4.82□□□□□ -1.64
PCM1-214ENST00000521338 IER2Q9BTL4 223 aa4.82□□□□□ -1.64
PCM1-214ENST00000521338 C12orf65Q9H3J6 166 aaKnown RBP4.82□□□□□ -1.64
PCM1-214ENST00000521338 AURKAIP1Q9NWT8 199 aaPredicted RBP4.82□□□□□ -1.64
PCM1-214ENST00000521338 ACTR10Q9NZ32 417 aa4.82□□□□□ -1.64
PCM1-214ENST00000521338 NUB1Q9Y5A7 615 aa4.82□□□□□ -1.64
PCM1-214ENST00000521338 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.81□□□□□ -1.64
PCM1-214ENST00000521338 KRTAP23-1A1A580 65 aa4.81□□□□□ -1.64
PCM1-214ENST00000521338 PPFIA2O75334 1257 aa4.81□□□□□ -1.64
PCM1-214ENST00000521338 ATF4P18848 351 aaPredicted RBP4.81□□□□□ -1.64
PCM1-214ENST00000521338 DNAJA1P31689 397 aaKnown RBP4.81□□□□□ -1.64
PCM1-214ENST00000521338 GJA4P35212 333 aa4.81□□□□□ -1.64
PCM1-214ENST00000521338 NTRK3Q16288 839 aa4.81□□□□□ -1.64
PCM1-214ENST00000521338 SLC10A6Q3KNW5 377 aa4.81□□□□□ -1.64
PCM1-214ENST00000521338 TRIM68Q6AZZ1 485 aa4.81□□□□□ -1.64
PCM1-214ENST00000521338 DPP8Q6V1X1 898 aaPredicted RBP4.81□□□□□ -1.64
PCM1-214ENST00000521338 USP53Q70EK8 1073 aa4.81□□□□□ -1.64
PCM1-214ENST00000521338 TMPRSS6Q8IU80 811 aa4.81□□□□□ -1.64
PCM1-214ENST00000521338 PRRX2Q99811 253 aa4.81□□□□□ -1.64
PCM1-214ENST00000521338 KIAA1683Q9H0B3 1180 aa4.81□□□□□ -1.64
PCM1-214ENST00000521338 FAM90A27PA6NNH2 459 aa4.8□□□□□ -1.64
PCM1-214ENST00000521338 FOXN1O15353 648 aa4.8□□□□□ -1.64
PCM1-214ENST00000521338 DDAH1O94760 285 aa4.8□□□□□ -1.64
PCM1-214ENST00000521338 PDE6AP16499 860 aa4.8□□□□□ -1.64
PCM1-214ENST00000521338 IL13RA1P78552 427 aa4.8□□□□□ -1.64
PCM1-214ENST00000521338 EIF4HQ15056 248 aaKnown RBP4.8□□□□□ -1.64
PCM1-214ENST00000521338 STILQ15468 1287 aa4.8□□□□□ -1.64
PCM1-214ENST00000521338 KIZQ2M2Z5 673 aa4.8□□□□□ -1.64
PCM1-214ENST00000521338 LRCH2Q5VUJ6 765 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms