RNA–Protein interactions for RNA: ENST00000521331.5

PRKDC-204, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-204ENST00000521331 TNPO1Q92973 898 aaKnown RBP17.07■□□□□ 0.32
PRKDC-204ENST00000521331 CLP1Q92989 425 aaKnown RBP17.07■□□□□ 0.32
PRKDC-204ENST00000521331 RC3H2Q9HBD1 1191 aaKnown RBP17.07■□□□□ 0.32
PRKDC-204ENST00000521331 JADE2Q9NQC1 790 aa17.07■□□□□ 0.32
PRKDC-204ENST00000521331 CLDND1Q9NY35 253 aa17.07■□□□□ 0.32
PRKDC-204ENST00000521331 ENPP3O14638 875 aa17.06■□□□□ 0.32
PRKDC-204ENST00000521331 LINC00271P0C7V0 271 aa17.06■□□□□ 0.32
PRKDC-204ENST00000521331 MRPS6P82932 125 aaKnown RBP17.06■□□□□ 0.32
PRKDC-204ENST00000521331 MARCH8Q5T0T0 291 aa17.06■□□□□ 0.32
PRKDC-204ENST00000521331 DNAJB3Q8WWF6 145 aa17.06■□□□□ 0.32
PRKDC-204ENST00000521331 PLVAPQ9BX97 442 aa17.06■□□□□ 0.32
PRKDC-204ENST00000521331 CDY2AQ9Y6F7 541 aa17.06■□□□□ 0.32
PRKDC-204ENST00000521331 SQORQ9Y6N5 450 aa17.06■□□□□ 0.32
PRKDC-204ENST00000521331 PIEZO1Q92508 2521 aa17.06■□□□□ 0.32
PRKDC-204ENST00000521331 BTG3Q14201 252 aaPredicted RBP17.05■□□□□ 0.32
PRKDC-204ENST00000521331 UBE2SQ16763 222 aa17.05■□□□□ 0.32
PRKDC-204ENST00000521331 IER5Q5VY09 327 aa17.05■□□□□ 0.32
PRKDC-204ENST00000521331 TEX2Q8IWB9 1127 aa17.05■□□□□ 0.32
PRKDC-204ENST00000521331 CMTR1Q8N1G2 835 aaKnown RBP17.05■□□□□ 0.32
PRKDC-204ENST00000521331 ZNF689Q96CS4 500 aaPredicted RBP17.05■□□□□ 0.32
PRKDC-204ENST00000521331 FTHL17Q9BXU8 183 aa17.05■□□□□ 0.32
PRKDC-204ENST00000521331 AZI2Q9H6S1 392 aa17.05■□□□□ 0.32
PRKDC-204ENST00000521331 JPH1Q9HDC5 661 aaPredicted RBP17.05■□□□□ 0.32
PRKDC-204ENST00000521331 PKD2L1Q9P0L9 805 aa17.05■□□□□ 0.32
PRKDC-204ENST00000521331 PCDHA6Q9UN73 950 aa17.05■□□□□ 0.32
PRKDC-204ENST00000521331 PCDHA8Q9Y5H6 950 aa17.05■□□□□ 0.32
PRKDC-204ENST00000521331 SLC12A7Q9Y666 1083 aa17.05■□□□□ 0.32
PRKDC-204ENST00000521331 GRM6O15303 877 aa17.04■□□□□ 0.32
PRKDC-204ENST00000521331 DCXO43602 365 aa17.04■□□□□ 0.32
PRKDC-204ENST00000521331 DGKIO75912 1065 aa17.04■□□□□ 0.32
PRKDC-204ENST00000521331 RXRAP19793 462 aa17.04■□□□□ 0.32
PRKDC-204ENST00000521331 IGBP1P78318 339 aa17.04■□□□□ 0.32
PRKDC-204ENST00000521331 ZP2Q05996 745 aa17.04■□□□□ 0.32
PRKDC-204ENST00000521331 CSPP1Q1MSJ5 1256 aa17.04■□□□□ 0.32
PRKDC-204ENST00000521331 CTC1Q2NKJ3 1217 aa17.04■□□□□ 0.32
PRKDC-204ENST00000521331 TMTC3Q6ZXV5 915 aa17.04■□□□□ 0.32
PRKDC-204ENST00000521331 HEATR3Q7Z4Q2 680 aa17.04■□□□□ 0.32
PRKDC-204ENST00000521331 ADHFE1Q8IWW8 467 aa17.04■□□□□ 0.32
PRKDC-204ENST00000521331 FANCBQ8NB91 859 aa17.04■□□□□ 0.32
PRKDC-204ENST00000521331 SLC9A2Q9UBY0 812 aa17.04■□□□□ 0.32
PRKDC-204ENST00000521331 C19orf67A6NJJ6 358 aa17.03■□□□□ 0.32
PRKDC-204ENST00000521331 M0QZ92 97 aa17.03■□□□□ 0.32
PRKDC-204ENST00000521331 SLC27A2O14975 620 aa17.03■□□□□ 0.32
PRKDC-204ENST00000521331 MMP1P03956 469 aa17.03■□□□□ 0.32
PRKDC-204ENST00000521331 INSRRP14616 1297 aa17.03■□□□□ 0.32
PRKDC-204ENST00000521331 CD52P31358 61 aa17.03■□□□□ 0.32
PRKDC-204ENST00000521331 HYAL1Q12794 435 aa17.03■□□□□ 0.32
PRKDC-204ENST00000521331 NAALADL2Q58DX5 795 aa17.03■□□□□ 0.32
PRKDC-204ENST00000521331 NPAS4Q8IUM7 802 aa17.03■□□□□ 0.32
PRKDC-204ENST00000521331 SDF4Q9BRK5 362 aa17.03■□□□□ 0.32
PRKDC-204ENST00000521331 UPF3BQ9BZI7 483 aaKnown RBP17.03■□□□□ 0.32
PRKDC-204ENST00000521331 LSG1Q9H089 658 aaKnown RBP17.03■□□□□ 0.32
PRKDC-204ENST00000521331 FAM49AQ9H0Q0 323 aaPredicted RBP17.03■□□□□ 0.32
PRKDC-204ENST00000521331 TRPC6Q9Y210 931 aa17.03■□□□□ 0.32
PRKDC-204ENST00000521331 MUC6Q6W4X9 2439 aa17.03■□□□□ 0.32
PRKDC-204ENST00000521331 NFASCO94856 1347 aa17.02■□□□□ 0.32
PRKDC-204ENST00000521331 hCG_1642624A0A1W2PR95 340 aa17.02■□□□□ 0.32
PRKDC-204ENST00000521331 POTEB3A0JP26 581 aa17.02■□□□□ 0.32
PRKDC-204ENST00000521331 STAG3L1P0CL83 205 aa17.02■□□□□ 0.32
PRKDC-204ENST00000521331 LTBRP36941 435 aa17.02■□□□□ 0.32
PRKDC-204ENST00000521331 POTEBQ6S5H4 581 aa17.02■□□□□ 0.32
PRKDC-204ENST00000521331 SYNE3Q6ZMZ3 975 aa17.02■□□□□ 0.32
PRKDC-204ENST00000521331 FAM43BQ6ZT52 329 aaPredicted RBP17.02■□□□□ 0.32
PRKDC-204ENST00000521331 PLPPR4Q7Z2D5 763 aa17.02■□□□□ 0.32
PRKDC-204ENST00000521331 SGMS1Q86VZ5 419 aa17.02■□□□□ 0.32
PRKDC-204ENST00000521331 CMTR2Q8IYT2 770 aaKnown RBP17.02■□□□□ 0.32
PRKDC-204ENST00000521331 CCDC82Q8N4S0 544 aa17.02■□□□□ 0.32
PRKDC-204ENST00000521331 P2RX5Q93086 422 aa17.02■□□□□ 0.32
PRKDC-204ENST00000521331 PPP2R3CQ969Q6 453 aa17.02■□□□□ 0.32
PRKDC-204ENST00000521331 UIMC1Q96RL1 719 aa17.02■□□□□ 0.32
PRKDC-204ENST00000521331 PCYT2Q99447 389 aa17.02■□□□□ 0.32
PRKDC-204ENST00000521331 POP1Q99575 1024 aaKnown RBP17.02■□□□□ 0.32
PRKDC-204ENST00000521331 MXRA8Q9BRK3 442 aa17.02■□□□□ 0.32
PRKDC-204ENST00000521331 AGO3Q9H9G7 860 aaKnown RBP17.02■□□□□ 0.32
PRKDC-204ENST00000521331 KCNH7Q9NS40 1196 aa17.02■□□□□ 0.32
PRKDC-204ENST00000521331 PCDHA2Q9Y5H9 948 aa17.02■□□□□ 0.32
PRKDC-204ENST00000521331 TRPV2Q9Y5S1 764 aa17.02■□□□□ 0.32
PRKDC-204ENST00000521331 RALGAPA2Q2PPJ7 1873 aa17.01■□□□□ 0.31
PRKDC-204ENST00000521331 DOCK5Q9H7D0 1870 aa17.01■□□□□ 0.31
PRKDC-204ENST00000521331 FOSP01100 380 aaPredicted RBP17.01■□□□□ 0.31
PRKDC-204ENST00000521331 SMAD2Q15796 467 aaKnown RBP17.01■□□□□ 0.31
PRKDC-204ENST00000521331 CREB3L3Q68CJ9 461 aa17.01■□□□□ 0.31
PRKDC-204ENST00000521331 PPP1R18Q6NYC8 613 aa17.01■□□□□ 0.31
PRKDC-204ENST00000521331 MICU3Q86XE3 530 aa17.01■□□□□ 0.31
PRKDC-204ENST00000521331 NME8Q8N427 588 aa17.01■□□□□ 0.31
PRKDC-204ENST00000521331 LINC01599Q8WXQ3 324 aa17.01■□□□□ 0.31
PRKDC-204ENST00000521331 RBM28Q9NW13 759 aaKnown RBP17.01■□□□□ 0.31
PRKDC-204ENST00000521331 PLAGL2Q9UPG8 496 aa17.01■□□□□ 0.31
PRKDC-204ENST00000521331 MYO7AQ13402 2215 aa17.01■□□□□ 0.31
PRKDC-204ENST00000521331 IGSF9BQ9UPX0 1349 aa17■□□□□ 0.31
PRKDC-204ENST00000521331 SLC26A2P50443 739 aa17■□□□□ 0.31
PRKDC-204ENST00000521331 STAT5BP51692 787 aa17■□□□□ 0.31
PRKDC-204ENST00000521331 ACTR2P61160 394 aa17■□□□□ 0.31
PRKDC-204ENST00000521331 PAK2Q13177 524 aa17■□□□□ 0.31
PRKDC-204ENST00000521331 SMAD4Q13485 552 aaKnown RBP17■□□□□ 0.31
PRKDC-204ENST00000521331 PLCB4Q15147 1175 aa17■□□□□ 0.31
PRKDC-204ENST00000521331 WWC2Q6AWC2 1192 aa17■□□□□ 0.31
PRKDC-204ENST00000521331 RAB11FIP4Q86YS3 637 aa17■□□□□ 0.31
PRKDC-204ENST00000521331 CRIPAKQ8N1N5 446 aa17■□□□□ 0.31
PRKDC-204ENST00000521331 ZBTB10Q96DT7 871 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms