RNA–Protein interactions for RNA: ENST00000521232.1

SQLE-205, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-205ENST00000521232 STAT5BP51692 787 aa19.4■□□□□ 0.7
SQLE-205ENST00000521232 STK3Q13188 491 aa19.4■□□□□ 0.7
SQLE-205ENST00000521232 GRIK4Q16099 956 aa19.4■□□□□ 0.7
SQLE-205ENST00000521232 PLEKHG4Q58EX7 1191 aa19.4■□□□□ 0.7
SQLE-205ENST00000521232 MARCH8Q5T0T0 291 aa19.4■□□□□ 0.7
SQLE-205ENST00000521232 PPP2R2DQ66LE6 453 aa19.4■□□□□ 0.7
SQLE-205ENST00000521232 CPLX2Q6PUV4 134 aaKnown RBP19.4■□□□□ 0.7
SQLE-205ENST00000521232 DBF4BQ8NFT6 615 aa19.4■□□□□ 0.7
SQLE-205ENST00000521232 RASGRP4Q8TDF6 673 aa19.4■□□□□ 0.7
SQLE-205ENST00000521232 TNPO1Q92973 898 aaKnown RBP19.4■□□□□ 0.7
SQLE-205ENST00000521232 IL17RAQ96F46 866 aa19.4■□□□□ 0.7
SQLE-205ENST00000521232 RRN3P2A6NIE6 340 aa19.39■□□□□ 0.69
SQLE-205ENST00000521232 EIF5BO60841 1220 aaKnown RBP19.39■□□□□ 0.69
SQLE-205ENST00000521232 CA3P07451 260 aa19.39■□□□□ 0.69
SQLE-205ENST00000521232 NLRP5P59047 1200 aa19.39■□□□□ 0.69
SQLE-205ENST00000521232 MKRN4PQ13434 485 aaPredicted RBP19.39■□□□□ 0.69
SQLE-205ENST00000521232 TAF2Q6P1X5 1199 aa19.39■□□□□ 0.69
SQLE-205ENST00000521232 ABHD15Q6UXT9 468 aa19.39■□□□□ 0.69
SQLE-205ENST00000521232 FAM177A1Q8N128 213 aaPredicted RBP19.39■□□□□ 0.69
SQLE-205ENST00000521232 GAS2L1Q99501 681 aaPredicted RBP19.39■□□□□ 0.69
SQLE-205ENST00000521232 IPO5O00410 1097 aaKnown RBP19.38■□□□□ 0.69
SQLE-205ENST00000521232 EDIL3O43854 480 aa19.38■□□□□ 0.69
SQLE-205ENST00000521232 CCNE2O96020 404 aa19.38■□□□□ 0.69
SQLE-205ENST00000521232 INSRRP14616 1297 aa19.38■□□□□ 0.69
SQLE-205ENST00000521232 SLC26A2P50443 739 aa19.38■□□□□ 0.69
SQLE-205ENST00000521232 USP11P51784 963 aa19.38■□□□□ 0.69
SQLE-205ENST00000521232 DEFB103AP81534 67 aa19.38■□□□□ 0.69
SQLE-205ENST00000521232 SETQ01105 290 aaPredicted RBP19.38■□□□□ 0.69
SQLE-205ENST00000521232 PLCB4Q15147 1175 aa19.38■□□□□ 0.69
SQLE-205ENST00000521232 RUFY4Q6ZNE9 571 aa19.38■□□□□ 0.69
SQLE-205ENST00000521232 ZNF577Q9BSK1 485 aa19.38■□□□□ 0.69
SQLE-205ENST00000521232 OSBPL7Q9BZF2 842 aa19.38■□□□□ 0.69
SQLE-205ENST00000521232 TBC1D22BQ9NU19 505 aa19.38■□□□□ 0.69
SQLE-205ENST00000521232 TUBE1Q9UJT0 475 aa19.38■□□□□ 0.69
SQLE-205ENST00000521232 PCDHA4Q9UN74 947 aa19.38■□□□□ 0.69
SQLE-205ENST00000521232 RBAK-RBAKDNI3L0D1 243 aa19.37■□□□□ 0.69
SQLE-205ENST00000521232 TLL1O43897 1013 aa19.37■□□□□ 0.69
SQLE-205ENST00000521232 CHRNA1P02708 482 aa19.37■□□□□ 0.69
SQLE-205ENST00000521232 CTSHP09668 335 aa19.37■□□□□ 0.69
SQLE-205ENST00000521232 SCRN1Q12765 414 aa19.37■□□□□ 0.69
SQLE-205ENST00000521232 ADGRE1Q14246 886 aa19.37■□□□□ 0.69
SQLE-205ENST00000521232 TPCN1Q9ULQ1 816 aa19.37■□□□□ 0.69
SQLE-205ENST00000521232 MICAL3Q7RTP6 2002 aa19.37■□□□□ 0.69
SQLE-205ENST00000521232 VCANP13611 3396 aa19.36■□□□□ 0.69
SQLE-205ENST00000521232 M0R2N6 131 aa19.36■□□□□ 0.69
SQLE-205ENST00000521232 DDX39AO00148 427 aaKnown RBP19.36■□□□□ 0.69
SQLE-205ENST00000521232 PFKFB2O60825 505 aa19.36■□□□□ 0.69
SQLE-205ENST00000521232 GJB5O95377 273 aa19.36■□□□□ 0.69
SQLE-205ENST00000521232 MGAT3Q09327 533 aa19.36■□□□□ 0.69
SQLE-205ENST00000521232 ANKRD1Q15327 319 aa19.36■□□□□ 0.69
SQLE-205ENST00000521232 PRR16Q569H4 304 aa19.36■□□□□ 0.69
SQLE-205ENST00000521232 GALNT17Q6IS24 598 aa19.36■□□□□ 0.69
SQLE-205ENST00000521232 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.36■□□□□ 0.693e-7■■□□□ 13.2
SQLE-205ENST00000521232 TMCO2Q7Z6W1 182 aaPredicted RBP19.36■□□□□ 0.69
SQLE-205ENST00000521232 RSPH3Q86UC2 560 aa19.36■□□□□ 0.69
SQLE-205ENST00000521232 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.36■□□□□ 0.69
SQLE-205ENST00000521232 SEPT8Q92599 483 aa19.36■□□□□ 0.69
SQLE-205ENST00000521232 LENG9Q96B70 501 aa19.36■□□□□ 0.69
SQLE-205ENST00000521232 C22orf23Q9BZE7 217 aa19.36■□□□□ 0.69
SQLE-205ENST00000521232 SLKQ9H2G2 1235 aaPredicted RBP19.36■□□□□ 0.69
SQLE-205ENST00000521232 TRPC6Q9Y210 931 aa19.36■□□□□ 0.69
SQLE-205ENST00000521232 POTEB3A0JP26 581 aa19.35■□□□□ 0.69
SQLE-205ENST00000521232 CDKL5O76039 1030 aa19.35■□□□□ 0.69
SQLE-205ENST00000521232 RPLP2P05387 115 aaKnown RBP19.35■□□□□ 0.69
SQLE-205ENST00000521232 IGBP1P78318 339 aa19.35■□□□□ 0.69
SQLE-205ENST00000521232 TAP1Q03518 808 aa19.35■□□□□ 0.69
SQLE-205ENST00000521232 FAM160B1Q5W0V3 765 aa19.35■□□□□ 0.69
SQLE-205ENST00000521232 ZNF746Q6NUN9 644 aaPredicted RBP19.35■□□□□ 0.69
SQLE-205ENST00000521232 MIS18BP1Q6P0N0 1132 aa19.35■□□□□ 0.69
SQLE-205ENST00000521232 POTEBQ6S5H4 581 aa19.35■□□□□ 0.69
SQLE-205ENST00000521232 BLIDQ8IZY5 108 aa19.35■□□□□ 0.69
SQLE-205ENST00000521232 DAGLBQ8NCG7 672 aa19.35■□□□□ 0.69
SQLE-205ENST00000521232 DNAJB3Q8WWF6 145 aa19.35■□□□□ 0.69
SQLE-205ENST00000521232 RAD9AQ99638 391 aa19.35■□□□□ 0.69
SQLE-205ENST00000521232 ZBED2Q9BTP6 218 aa19.35■□□□□ 0.69
SQLE-205ENST00000521232 PCDHA2Q9Y5H9 948 aa19.35■□□□□ 0.69
SQLE-205ENST00000521232 CUL9Q8IWT3 2517 aa19.35■□□□□ 0.69
SQLE-205ENST00000521232 MYH9P35579 1960 aaKnown RBP19.35■□□□□ 0.69
SQLE-205ENST00000521232 ARHGEF15O94989 841 aa19.34■□□□□ 0.69
SQLE-205ENST00000521232 AK2P54819 239 aa19.34■□□□□ 0.69
SQLE-205ENST00000521232 NPY5RQ15761 445 aa19.34■□□□□ 0.69
SQLE-205ENST00000521232 SWSAP1Q6NVH7 229 aa19.34■□□□□ 0.69
SQLE-205ENST00000521232 CCDC60Q8IWA6 550 aaPredicted RBP19.34■□□□□ 0.69
SQLE-205ENST00000521232 SMAP1Q8IYB5 467 aaPredicted RBP19.34■□□□□ 0.69
SQLE-205ENST00000521232 APBB2Q92870 758 aa19.34■□□□□ 0.69
SQLE-205ENST00000521232 AIFM3Q96NN9 605 aa19.34■□□□□ 0.69
SQLE-205ENST00000521232 UIMC1Q96RL1 719 aa19.34■□□□□ 0.69
SQLE-205ENST00000521232 ZNF302Q9NR11 478 aa19.34■□□□□ 0.69
SQLE-205ENST00000521232 REV3LO60673 3130 aa19.34■□□□□ 0.69
SQLE-205ENST00000521232 BACH1O14867 736 aa19.33■□□□□ 0.68
SQLE-205ENST00000521232 HBP1O60381 514 aa19.33■□□□□ 0.68
SQLE-205ENST00000521232 SEC24BO95487 1268 aa19.33■□□□□ 0.68
SQLE-205ENST00000521232 AMHP03971 560 aa19.33■□□□□ 0.68
SQLE-205ENST00000521232 KRT76Q01546 638 aa19.33■□□□□ 0.68
SQLE-205ENST00000521232 TBCKQ8TEA7 893 aa19.33■□□□□ 0.68
SQLE-205ENST00000521232 ATP8B4Q8TF62 1192 aa19.33■□□□□ 0.68
SQLE-205ENST00000521232 ZBTB10Q96DT7 871 aa19.33■□□□□ 0.68
SQLE-205ENST00000521232 IFIH1Q9BYX4 1025 aaKnown RBP19.33■□□□□ 0.68
SQLE-205ENST00000521232 PCDHA10Q9Y5I2 948 aa19.33■□□□□ 0.68
SQLE-205ENST00000521232 MAFBQ9Y5Q3 323 aaPredicted RBP19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms