RNA–Protein interactions for RNA: ENST00000521167.1

TRAPPC9-209, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-209ENST00000521167 SDF4Q9BRK5 362 aa11.85□□□□□ -0.51
TRAPPC9-209ENST00000521167 C22orf23Q9BZE7 217 aa11.85□□□□□ -0.51
TRAPPC9-209ENST00000521167 RNPEPQ9H4A4 650 aa11.85□□□□□ -0.51
TRAPPC9-209ENST00000521167 SMARCAD1Q9H4L7 1026 aa11.85□□□□□ -0.51
TRAPPC9-209ENST00000521167 VPS54Q9P1Q0 977 aa11.85□□□□□ -0.51
TRAPPC9-209ENST00000521167 SLC9A2Q9UBY0 812 aa11.85□□□□□ -0.51
TRAPPC9-209ENST00000521167 TPCN1Q9ULQ1 816 aa11.85□□□□□ -0.51
TRAPPC9-209ENST00000521167 LHX6Q9UPM6 363 aa11.85□□□□□ -0.51
TRAPPC9-209ENST00000521167 GBF1Q92538 1859 aa11.85□□□□□ -0.51
TRAPPC9-209ENST00000521167 EVPLQ92817 2033 aa11.84□□□□□ -0.51
TRAPPC9-209ENST00000521167 PPFIA3O75145 1194 aa11.84□□□□□ -0.51
TRAPPC9-209ENST00000521167 LGR5O75473 907 aa11.84□□□□□ -0.51
TRAPPC9-209ENST00000521167 SMIM10L2AP0DMW4 78 aa11.84□□□□□ -0.51
TRAPPC9-209ENST00000521167 SMIM10L2BP0DMW5 78 aa11.84□□□□□ -0.51
TRAPPC9-209ENST00000521167 ARP10275 920 aa11.84□□□□□ -0.51
TRAPPC9-209ENST00000521167 ACTN1P12814 892 aa11.84□□□□□ -0.51
TRAPPC9-209ENST00000521167 CIITAP33076 1130 aa11.84□□□□□ -0.51
TRAPPC9-209ENST00000521167 USP11P51784 963 aa11.84□□□□□ -0.51
TRAPPC9-209ENST00000521167 AK2P54819 239 aa11.84□□□□□ -0.51
TRAPPC9-209ENST00000521167 NLRP5P59047 1200 aa11.84□□□□□ -0.51
TRAPPC9-209ENST00000521167 SP4Q02446 784 aa11.84□□□□□ -0.51
TRAPPC9-209ENST00000521167 SCRN1Q12765 414 aa11.84□□□□□ -0.51
TRAPPC9-209ENST00000521167 SERINC5Q86VE9 423 aa11.84□□□□□ -0.51
TRAPPC9-209ENST00000521167 PLA2G4DQ86XP0 818 aa11.84□□□□□ -0.51
TRAPPC9-209ENST00000521167 DHX38Q92620 1227 aaKnown RBP11.84□□□□□ -0.51
TRAPPC9-209ENST00000521167 ATP6V0A1Q93050 837 aa11.84□□□□□ -0.51
TRAPPC9-209ENST00000521167 VWCEQ96DN2 955 aa11.84□□□□□ -0.51
TRAPPC9-209ENST00000521167 AGO4Q9HCK5 861 aaKnown RBP11.84□□□□□ -0.51
TRAPPC9-209ENST00000521167 JPH1Q9HDC5 661 aaPredicted RBP11.84□□□□□ -0.51
TRAPPC9-209ENST00000521167 RTN4Q9NQC3 1192 aaKnown RBP11.84□□□□□ -0.51
TRAPPC9-209ENST00000521167 PCDHA4Q9UN74 947 aa11.84□□□□□ -0.51
TRAPPC9-209ENST00000521167 IGLV3-22A0A075B6J6 115 aa11.83□□□□□ -0.52
TRAPPC9-209ENST00000521167 TMEM265A0A087WTH1 108 aa11.83□□□□□ -0.52
TRAPPC9-209ENST00000521167 ADAMTS3O15072 1205 aa11.83□□□□□ -0.52
TRAPPC9-209ENST00000521167 ATG7O95352 703 aa11.83□□□□□ -0.52
TRAPPC9-209ENST00000521167 CKBP12277 381 aa11.83□□□□□ -0.52
TRAPPC9-209ENST00000521167 NEK4P51957 841 aa11.83□□□□□ -0.52
TRAPPC9-209ENST00000521167 ZNF200P98182 395 aaPredicted RBP11.83□□□□□ -0.52
TRAPPC9-209ENST00000521167 SETQ01105 290 aaPredicted RBP11.83□□□□□ -0.52
TRAPPC9-209ENST00000521167 TRIM71Q2Q1W2 868 aaKnown RBP11.83□□□□□ -0.52
TRAPPC9-209ENST00000521167 ZNF697Q5TEC3 545 aa11.83□□□□□ -0.52
TRAPPC9-209ENST00000521167 LRRC8DQ7L1W4 858 aa11.83□□□□□ -0.52
TRAPPC9-209ENST00000521167 DAGLBQ8NCG7 672 aa11.83□□□□□ -0.52
TRAPPC9-209ENST00000521167 TNPO1Q92973 898 aaKnown RBP11.83□□□□□ -0.52
TRAPPC9-209ENST00000521167 TBC1D22BQ9NU19 505 aa11.83□□□□□ -0.52
TRAPPC9-209ENST00000521167 MTMR10Q9NXD2 777 aa11.83□□□□□ -0.52
TRAPPC9-209ENST00000521167 ERAP1Q9NZ08 941 aa11.83□□□□□ -0.52
TRAPPC9-209ENST00000521167 PKD2L1Q9P0L9 805 aa11.83□□□□□ -0.52
TRAPPC9-209ENST00000521167 TELO2Q9Y4R8 837 aa11.83□□□□□ -0.52
TRAPPC9-209ENST00000521167 EMSYQ7Z589 1322 aa11.83□□□□□ -0.52
TRAPPC9-209ENST00000521167 NRCAMQ92823 1304 aa11.83□□□□□ -0.52
TRAPPC9-209ENST00000521167 STK36Q9NRP7 1315 aa11.83□□□□□ -0.52
TRAPPC9-209ENST00000521167 FAM86B1E9PN63 330 aa11.82□□□□□ -0.52
TRAPPC9-209ENST00000521167 TREHO43280 583 aa11.82□□□□□ -0.52
TRAPPC9-209ENST00000521167 CAND2O75155 1236 aa11.82□□□□□ -0.52
TRAPPC9-209ENST00000521167 CXCL10P02778 98 aa11.82□□□□□ -0.52
TRAPPC9-209ENST00000521167 FAM86B2P0C5J1 330 aa11.82□□□□□ -0.52
TRAPPC9-209ENST00000521167 XBP1P17861 261 aa11.82□□□□□ -0.52
TRAPPC9-209ENST00000521167 ACTR2P61160 394 aa11.82□□□□□ -0.52
TRAPPC9-209ENST00000521167 ADAM17P78536 824 aa11.82□□□□□ -0.52
TRAPPC9-209ENST00000521167 ITGB3BPQ13352 177 aaPredicted RBP11.82□□□□□ -0.52
TRAPPC9-209ENST00000521167 HIC1Q14526 733 aa11.82□□□□□ -0.52
TRAPPC9-209ENST00000521167 Q7L0L9 218 aa11.82□□□□□ -0.52
TRAPPC9-209ENST00000521167 OTOP2Q7RTS6 562 aa11.82□□□□□ -0.52
TRAPPC9-209ENST00000521167 PLPPR4Q7Z2D5 763 aa11.82□□□□□ -0.52
TRAPPC9-209ENST00000521167 DEFB128Q7Z7B8 93 aa11.82□□□□□ -0.52
TRAPPC9-209ENST00000521167 TRIM50Q86XT4 487 aa11.82□□□□□ -0.52
TRAPPC9-209ENST00000521167 BLIDQ8IZY5 108 aa11.82□□□□□ -0.52
TRAPPC9-209ENST00000521167 RASGRP4Q8TDF6 673 aa11.82□□□□□ -0.52
TRAPPC9-209ENST00000521167 BBXQ8WY36 941 aaPredicted RBP11.82□□□□□ -0.52
TRAPPC9-209ENST00000521167 WASF1Q92558 559 aa11.82□□□□□ -0.52
TRAPPC9-209ENST00000521167 GLG1Q92896 1179 aa11.82□□□□□ -0.52
TRAPPC9-209ENST00000521167 FTOQ9C0B1 505 aaKnown RBP eCLIP11.82□□□□□ -0.52
TRAPPC9-209ENST00000521167 SEMA6BQ9H3T3 888 aa11.82□□□□□ -0.52
TRAPPC9-209ENST00000521167 AZI2Q9H6S1 392 aa11.82□□□□□ -0.52
TRAPPC9-209ENST00000521167 SETD4Q9NVD3 440 aa11.82□□□□□ -0.52
TRAPPC9-209ENST00000521167 SLC4A7Q9Y6M7 1214 aa11.82□□□□□ -0.52
TRAPPC9-209ENST00000521167 LOXHD1Q8IVV2 1947 aa11.82□□□□□ -0.52
TRAPPC9-209ENST00000521167 RRN3P2A6NIE6 340 aa11.81□□□□□ -0.52
TRAPPC9-209ENST00000521167 M0R2N6 131 aa11.81□□□□□ -0.52
TRAPPC9-209ENST00000521167 IPO5O00410 1097 aaKnown RBP11.81□□□□□ -0.52
TRAPPC9-209ENST00000521167 DHX15O43143 795 aaKnown RBP11.81□□□□□ -0.52
TRAPPC9-209ENST00000521167 BAIAP3O94812 1187 aa11.81□□□□□ -0.52
TRAPPC9-209ENST00000521167 SLC26A2P50443 739 aa11.81□□□□□ -0.52
TRAPPC9-209ENST00000521167 STAT5BP51692 787 aa11.81□□□□□ -0.52
TRAPPC9-209ENST00000521167 RAB30Q15771 203 aa11.81□□□□□ -0.52
TRAPPC9-209ENST00000521167 ME3Q16798 604 aa11.81□□□□□ -0.52
TRAPPC9-209ENST00000521167 C8orf34Q49A92 452 aa11.81□□□□□ -0.52
TRAPPC9-209ENST00000521167 PPP1R15BQ5SWA1 713 aa11.81□□□□□ -0.52
TRAPPC9-209ENST00000521167 ZNF618Q5T7W0 954 aa11.81□□□□□ -0.52
TRAPPC9-209ENST00000521167 ABHD15Q6UXT9 468 aa11.81□□□□□ -0.52
TRAPPC9-209ENST00000521167 RPAINQ86UA6 219 aa11.81□□□□□ -0.52
TRAPPC9-209ENST00000521167 PHOSPHO2Q8TCD6 241 aa11.81□□□□□ -0.52
TRAPPC9-209ENST00000521167 OXER1Q8TDS5 423 aa11.81□□□□□ -0.52
TRAPPC9-209ENST00000521167 PCYT2Q99447 389 aa11.81□□□□□ -0.52
TRAPPC9-209ENST00000521167 ZNF577Q9BSK1 485 aa11.81□□□□□ -0.52
TRAPPC9-209ENST00000521167 CXXC1Q9P0U4 656 aaPredicted RBP11.81□□□□□ -0.52
TRAPPC9-209ENST00000521167 MSRAQ9UJ68 235 aa11.81□□□□□ -0.52
TRAPPC9-209ENST00000521167 MICAL3Q7RTP6 2002 aa11.81□□□□□ -0.52
TRAPPC9-209ENST00000521167 LAMA2P24043 3122 aaKnown RBP11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms