RNA–Protein interactions for RNA: ENST00000520868.5

PABPC1-216, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-216ENST00000520868 ADCY9O60503 1353 aa7.93□□□□□ -1.14
PABPC1-216ENST00000520868 C4BP0C0L5 1744 aa7.92□□□□□ -1.14
PABPC1-216ENST00000520868 SRSF3P84103 164 aaKnown RBP7.92□□□□□ -1.14
PABPC1-216ENST00000520868 AMPD2Q01433 879 aa7.92□□□□□ -1.14
PABPC1-216ENST00000520868 EIF4A2Q14240 407 aaKnown RBP7.92□□□□□ -1.14
PABPC1-216ENST00000520868 CIAPIN1Q6FI81 312 aa7.92□□□□□ -1.14
PABPC1-216ENST00000520868 NLGN1Q8N2Q7 840 aa7.92□□□□□ -1.14
PABPC1-216ENST00000520868 A0A1W2PQJ5 194 aa7.91□□□□□ -1.14
PABPC1-216ENST00000520868 ZSCAN22P10073 491 aaPredicted RBP7.91□□□□□ -1.14
PABPC1-216ENST00000520868 DPEP1P16444 411 aa7.91□□□□□ -1.14
PABPC1-216ENST00000520868 RFC4P35249 363 aa7.91□□□□□ -1.14
PABPC1-216ENST00000520868 RBM25P49756 843 aaKnown RBP7.91□□□□□ -1.14
PABPC1-216ENST00000520868 SEPHS1P49903 392 aa7.91□□□□□ -1.14
PABPC1-216ENST00000520868 CORO7P57737 925 aa7.91□□□□□ -1.14
PABPC1-216ENST00000520868 LINC00310P59036 64 aa7.91□□□□□ -1.14
PABPC1-216ENST00000520868 TGFB2P61812 414 aa7.91□□□□□ -1.14
PABPC1-216ENST00000520868 PLEKHO1Q53GL0 409 aaPredicted RBP7.91□□□□□ -1.14
PABPC1-216ENST00000520868 POMZP3Q6PJE2 187 aa7.91□□□□□ -1.14
PABPC1-216ENST00000520868 APBA2Q99767 749 aa7.91□□□□□ -1.14
PABPC1-216ENST00000520868 TNFRSF12AQ9NP84 129 aa7.91□□□□□ -1.14
PABPC1-216ENST00000520868 SUSD2Q9UGT4 822 aa7.91□□□□□ -1.14
PABPC1-216ENST00000520868 TOGARAM1Q9Y4F4 1720 aa7.91□□□□□ -1.14
PABPC1-216ENST00000520868 ITGB4P16144 1822 aa7.91□□□□□ -1.14
PABPC1-216ENST00000520868 TAF1LQ8IZX4 1826 aa7.91□□□□□ -1.14
PABPC1-216ENST00000520868 NCAPD2Q15021 1401 aa7.9□□□□□ -1.14
PABPC1-216ENST00000520868 ERVV-2B6SEH9 535 aa7.9□□□□□ -1.14
PABPC1-216ENST00000520868 AURKAO14965 403 aa7.9□□□□□ -1.14
PABPC1-216ENST00000520868 RPS6KA4O75676 772 aa7.9□□□□□ -1.14
PABPC1-216ENST00000520868 GYS1P13807 737 aa7.9□□□□□ -1.14
PABPC1-216ENST00000520868 L1CAMP32004 1257 aa7.9□□□□□ -1.14
PABPC1-216ENST00000520868 VIPR1P32241 457 aa7.9□□□□□ -1.14
PABPC1-216ENST00000520868 NR1I3Q14994 352 aa7.9□□□□□ -1.14
PABPC1-216ENST00000520868 RAB3GAP1Q15042 981 aa7.9□□□□□ -1.14
PABPC1-216ENST00000520868 SIAH1Q8IUQ4 282 aa7.9□□□□□ -1.14
PABPC1-216ENST00000520868 ZNF428Q96B54 188 aa7.9□□□□□ -1.14
PABPC1-216ENST00000520868 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.9□□□□□ -1.14
PABPC1-216ENST00000520868 ACTR10Q9NZ32 417 aa7.9□□□□□ -1.14
PABPC1-216ENST00000520868 BACE2Q9Y5Z0 518 aa7.9□□□□□ -1.14
PABPC1-216ENST00000520868 TRBV23OR9-2A0A075B6M9 112 aa7.89□□□□□ -1.15
PABPC1-216ENST00000520868 NOP56O00567 594 aaKnown RBP7.89□□□□□ -1.15
PABPC1-216ENST00000520868 HSP90AB1P08238 724 aaKnown RBP7.89□□□□□ -1.15
PABPC1-216ENST00000520868 MVKQ03426 396 aa7.89□□□□□ -1.15
PABPC1-216ENST00000520868 ARID5AQ03989 594 aa7.89□□□□□ -1.15
PABPC1-216ENST00000520868 DPY19L1Q2PZI1 675 aa7.89□□□□□ -1.15
PABPC1-216ENST00000520868 ZNF530Q6P9A1 599 aaPredicted RBP7.89□□□□□ -1.15
PABPC1-216ENST00000520868 IRF2BPLQ9H1B7 796 aa7.89□□□□□ -1.15
PABPC1-216ENST00000520868 NMRK2Q9NPI5 230 aa7.89□□□□□ -1.15
PABPC1-216ENST00000520868 PDLIM7Q9NR12 457 aa7.89□□□□□ -1.15
PABPC1-216ENST00000520868 KLHL14Q9P2G3 628 aa7.89□□□□□ -1.15
PABPC1-216ENST00000520868 PRKAG3Q9UGI9 489 aa7.89□□□□□ -1.15
PABPC1-216ENST00000520868 MBD1Q9UIS9 605 aaPredicted RBP7.89□□□□□ -1.15
PABPC1-216ENST00000520868 CNOT6Q9ULM6 557 aaKnown RBP7.89□□□□□ -1.15
PABPC1-216ENST00000520868 AKT3Q9Y243 479 aa7.89□□□□□ -1.15
PABPC1-216ENST00000520868 MRVI1Q9Y6F6 885 aa7.89□□□□□ -1.15
PABPC1-216ENST00000520868 UBR3Q6ZT12 1888 aa7.89□□□□□ -1.15
PABPC1-216ENST00000520868 KIF20BQ96Q89 1820 aa7.89□□□□□ -1.15
PABPC1-216ENST00000520868 PKD1L3Q7Z443 1732 aa7.89□□□□□ -1.15
PABPC1-216ENST00000520868 PXDNLA1KZ92 1463 aa7.88□□□□□ -1.15
PABPC1-216ENST00000520868 ADAMTS20P59510 1910 aa7.88□□□□□ -1.15
PABPC1-216ENST00000520868 MAP2P11137 1827 aaKnown RBP7.88□□□□□ -1.15
PABPC1-216ENST00000520868 C2orf71A6NGG8 1288 aa7.88□□□□□ -1.15
PABPC1-216ENST00000520868 NUDT19A8MXV4 375 aa7.88□□□□□ -1.15
PABPC1-216ENST00000520868 STXBP3O00186 592 aa7.88□□□□□ -1.15
PABPC1-216ENST00000520868 RFXAPO00287 272 aa7.88□□□□□ -1.15
PABPC1-216ENST00000520868 SMAD7O15105 426 aaKnown RBP7.88□□□□□ -1.15
PABPC1-216ENST00000520868 NUAK1O60285 661 aa7.88□□□□□ -1.15
PABPC1-216ENST00000520868 VAMP4O75379 141 aa7.88□□□□□ -1.15
PABPC1-216ENST00000520868 TOMM70O94826 608 aa7.88□□□□□ -1.15
PABPC1-216ENST00000520868 MTHFSP49914 203 aa7.88□□□□□ -1.15
PABPC1-216ENST00000520868 SSPNQ14714 243 aa7.88□□□□□ -1.15
PABPC1-216ENST00000520868 CBX2Q14781 532 aaPredicted RBP7.88□□□□□ -1.15
PABPC1-216ENST00000520868 BVESQ8NE79 360 aa7.88□□□□□ -1.15
PABPC1-216ENST00000520868 MCMBPQ9BTE3 642 aa7.88□□□□□ -1.15
PABPC1-216ENST00000520868 PANK3Q9H999 370 aa7.88□□□□□ -1.15
PABPC1-216ENST00000520868 SRP68Q9UHB9 627 aaKnown RBP7.88□□□□□ -1.15
PABPC1-216ENST00000520868 EMC9Q9Y3B6 208 aa7.88□□□□□ -1.15
PABPC1-216ENST00000520868 KDRP35968 1356 aa7.87□□□□□ -1.15
PABPC1-216ENST00000520868 SRGAP3O43295 1099 aa7.87□□□□□ -1.15
PABPC1-216ENST00000520868 MSL3P1P0C860 447 aa7.87□□□□□ -1.15
PABPC1-216ENST00000520868 KCNA3P22001 575 aa7.87□□□□□ -1.15
PABPC1-216ENST00000520868 CRKLP46109 303 aaKnown RBP7.87□□□□□ -1.15
PABPC1-216ENST00000520868 EPHB3P54753 998 aa7.87□□□□□ -1.15
PABPC1-216ENST00000520868 AMOTQ4VCS5 1084 aa7.87□□□□□ -1.15
PABPC1-216ENST00000520868 ZNF385BQ569K4 471 aa7.87□□□□□ -1.15
PABPC1-216ENST00000520868 C1orf141Q5JVX7 400 aa7.87□□□□□ -1.15
PABPC1-216ENST00000520868 SIGLEC10Q96LC7 697 aa7.87□□□□□ -1.15
PABPC1-216ENST00000520868 TINF2Q9BSI4 451 aa7.87□□□□□ -1.15
PABPC1-216ENST00000520868 APEX2Q9UBZ4 518 aa7.87□□□□□ -1.15
PABPC1-216ENST00000520868 CICQ96RK0 1608 aaPredicted RBP7.86□□□□□ -1.15
PABPC1-216ENST00000520868 N4BP3O15049 544 aa7.86□□□□□ -1.15
PABPC1-216ENST00000520868 CYBBP04839 570 aa7.86□□□□□ -1.15
PABPC1-216ENST00000520868 FGRP09769 529 aa7.86□□□□□ -1.15
PABPC1-216ENST00000520868 PAMP19021 973 aa7.86□□□□□ -1.15
PABPC1-216ENST00000520868 CHRNA5P30532 468 aa7.86□□□□□ -1.15
PABPC1-216ENST00000520868 MAPKAPK2P49137 400 aa7.86□□□□□ -1.15
PABPC1-216ENST00000520868 DALRD3Q5D0E6 543 aaKnown RBP7.86□□□□□ -1.15
PABPC1-216ENST00000520868 LARP1BQ659C4 914 aaKnown RBP7.86□□□□□ -1.15
PABPC1-216ENST00000520868 BICRALQ6AI39 1079 aa7.86□□□□□ -1.15
PABPC1-216ENST00000520868 SULT6B1Q6IMI4 303 aa7.86□□□□□ -1.15
PABPC1-216ENST00000520868 PAQR3Q6TCH7 311 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms