RNA–Protein interactions for RNA: ENST00000520857.5

TRAPPC9-208, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-208ENST00000520857 CNOT8Q9UFF9 292 aaKnown RBP13.99□□□□□ -0.17
TRAPPC9-208ENST00000520857 AKAP11Q9UKA4 1901 aa13.99□□□□□ -0.17
TRAPPC9-208ENST00000520857 PAX7P23759 505 aa13.98□□□□□ -0.17
TRAPPC9-208ENST00000520857 GCKP35557 465 aa13.98□□□□□ -0.17
TRAPPC9-208ENST00000520857 CRKLP46109 303 aaKnown RBP13.98□□□□□ -0.17
TRAPPC9-208ENST00000520857 ERFEQ4G0M1 354 aa13.98□□□□□ -0.17
TRAPPC9-208ENST00000520857 ZNF572Q7Z3I7 529 aaPredicted RBP13.98□□□□□ -0.17
TRAPPC9-208ENST00000520857 MREGQ8N565 214 aa13.98□□□□□ -0.17
TRAPPC9-208ENST00000520857 NSRP1Q9H0G5 558 aaKnown RBP13.98□□□□□ -0.17
TRAPPC9-208ENST00000520857 NEUROG2Q9H2A3 272 aa13.98□□□□□ -0.17
TRAPPC9-208ENST00000520857 BLOC1S4Q9NUP1 217 aa13.98□□□□□ -0.17
TRAPPC9-208ENST00000520857 PCDHA12Q9UN75 941 aa13.98□□□□□ -0.17
TRAPPC9-208ENST00000520857 MINPP1Q9UNW1 487 aa13.98□□□□□ -0.17
TRAPPC9-208ENST00000520857 FLT1P17948 1338 aa13.98□□□□□ -0.17
TRAPPC9-208ENST00000520857 SIPA1L3O60292 1781 aaPredicted RBP13.98□□□□□ -0.17
TRAPPC9-208ENST00000520857 TRIM37O94972 964 aa13.98□□□□□ -0.17
TRAPPC9-208ENST00000520857 KIF1AQ12756 1690 aa13.98□□□□□ -0.17
TRAPPC9-208ENST00000520857 PLCB4Q15147 1175 aa13.98□□□□□ -0.17
TRAPPC9-208ENST00000520857 SPRED3Q2MJR0 410 aa13.98□□□□□ -0.17
TRAPPC9-208ENST00000520857 CCDC38Q502W7 563 aa13.98□□□□□ -0.17
TRAPPC9-208ENST00000520857 KCNK18Q7Z418 384 aa13.98□□□□□ -0.17
TRAPPC9-208ENST00000520857 KSR1Q8IVT5 923 aa13.98□□□□□ -0.17
TRAPPC9-208ENST00000520857 CD302Q8IX05 232 aa13.98□□□□□ -0.17
TRAPPC9-208ENST00000520857 ANKRD42Q8N9B4 389 aa13.98□□□□□ -0.17
TRAPPC9-208ENST00000520857 LMTK3Q96Q04 1460 aa13.98□□□□□ -0.17
TRAPPC9-208ENST00000520857 XPO6Q96QU8 1125 aaKnown RBP13.98□□□□□ -0.17
TRAPPC9-208ENST00000520857 MMTAG2Q9BU76 263 aaKnown RBP13.98□□□□□ -0.17
TRAPPC9-208ENST00000520857 EDEM3Q9BZQ6 932 aa13.98□□□□□ -0.17
TRAPPC9-208ENST00000520857 EMILIN3Q9NT22 766 aa13.98□□□□□ -0.17
TRAPPC9-208ENST00000520857 HDAC9Q9UKV0 1011 aa13.98□□□□□ -0.17
TRAPPC9-208ENST00000520857 GFPT2O94808 682 aa13.97□□□□□ -0.17
TRAPPC9-208ENST00000520857 CHN1P15882 459 aa13.97□□□□□ -0.17
TRAPPC9-208ENST00000520857 USP11P51784 963 aa13.97□□□□□ -0.17
TRAPPC9-208ENST00000520857 SEMA3FQ13275 785 aa13.97□□□□□ -0.17
TRAPPC9-208ENST00000520857 LRRC47Q8N1G4 583 aaKnown RBP13.97□□□□□ -0.17
TRAPPC9-208ENST00000520857 SH3RF3Q8TEJ3 882 aaPredicted RBP13.97□□□□□ -0.17
TRAPPC9-208ENST00000520857 TRIM6Q9C030 488 aaPredicted RBP13.97□□□□□ -0.17
TRAPPC9-208ENST00000520857 RAB17Q9H0T7 212 aa13.97□□□□□ -0.17
TRAPPC9-208ENST00000520857 MLXIPLQ9NP71 852 aa13.97□□□□□ -0.17
TRAPPC9-208ENST00000520857 DAAM1Q9Y4D1 1078 aa13.97□□□□□ -0.17
TRAPPC9-208ENST00000520857 SLC37A4O43826 429 aa13.97□□□□□ -0.17
TRAPPC9-208ENST00000520857 XRCC5P13010 732 aaKnown RBP13.97□□□□□ -0.17
TRAPPC9-208ENST00000520857 LRCH2Q5VUJ6 765 aa13.97□□□□□ -0.17
TRAPPC9-208ENST00000520857 LRRC55Q6ZSA7 311 aa13.97□□□□□ -0.17
TRAPPC9-208ENST00000520857 ARMC9Q7Z3E5 817 aa13.97□□□□□ -0.17
TRAPPC9-208ENST00000520857 CTNNBL1Q8WYA6 563 aaPredicted RBP13.97□□□□□ -0.17
TRAPPC9-208ENST00000520857 FAM114A2Q9NRY5 505 aa13.97□□□□□ -0.17
TRAPPC9-208ENST00000520857 CAND2O75155 1236 aa13.97□□□□□ -0.17
TRAPPC9-208ENST00000520857 RASSF9O75901 435 aa13.97□□□□□ -0.17
TRAPPC9-208ENST00000520857 ZKSCAN8Q15776 578 aaPredicted RBP13.97□□□□□ -0.17
TRAPPC9-208ENST00000520857 OTUD6AQ7L8S5 288 aa13.97□□□□□ -0.17
TRAPPC9-208ENST00000520857 AZI2Q9H6S1 392 aa13.97□□□□□ -0.17
TRAPPC9-208ENST00000520857 NOD2Q9HC29 1040 aa13.97□□□□□ -0.17
TRAPPC9-208ENST00000520857 GNA14O95837 355 aa13.96□□□□□ -0.17
TRAPPC9-208ENST00000520857 ADCY1Q08828 1119 aa13.96□□□□□ -0.17
TRAPPC9-208ENST00000520857 LRRC14Q15048 493 aa13.96□□□□□ -0.17
TRAPPC9-208ENST00000520857 UAP1Q16222 522 aaPredicted RBP13.96□□□□□ -0.17
TRAPPC9-208ENST00000520857 LZTS2Q9BRK4 669 aa13.96□□□□□ -0.17
TRAPPC9-208ENST00000520857 CCDC188H7C350 402 aa13.96□□□□□ -0.17
TRAPPC9-208ENST00000520857 LCA5LO95447 670 aa13.96□□□□□ -0.17
TRAPPC9-208ENST00000520857 MKRN4PQ13434 485 aaPredicted RBP13.96□□□□□ -0.17
TRAPPC9-208ENST00000520857 AEBP2Q6ZN18 517 aaPredicted RBP13.96□□□□□ -0.17
TRAPPC9-208ENST00000520857 MARCH10Q8NA82 808 aaPredicted RBP13.96□□□□□ -0.17
TRAPPC9-208ENST00000520857 NEK9Q8TD19 979 aa13.96□□□□□ -0.17
TRAPPC9-208ENST00000520857 GLG1Q92896 1179 aa13.96□□□□□ -0.17
TRAPPC9-208ENST00000520857 PNMA5Q96PV4 448 aa13.96□□□□□ -0.17
TRAPPC9-208ENST00000520857 PAIP2Q9BPZ3 127 aaKnown RBP13.96□□□□□ -0.17
TRAPPC9-208ENST00000520857 ZMYND12Q9H0C1 365 aa13.96□□□□□ -0.17
TRAPPC9-208ENST00000520857 DDX25Q9UHL0 483 aaKnown RBP13.96□□□□□ -0.17
TRAPPC9-208ENST00000520857 RASAL2Q9UJF2 1139 aa13.96□□□□□ -0.17
TRAPPC9-208ENST00000520857 L3MBTL1Q9Y468 752 aa13.96□□□□□ -0.17
TRAPPC9-208ENST00000520857 PCDHGC5Q9Y5F6 944 aa13.96□□□□□ -0.17
TRAPPC9-208ENST00000520857 MPHOSPH10O00566 681 aaKnown RBP13.96□□□□□ -0.18
TRAPPC9-208ENST00000520857 CLIC2O15247 247 aa13.96□□□□□ -0.18
TRAPPC9-208ENST00000520857 CLSTN1O94985 981 aa13.96□□□□□ -0.18
TRAPPC9-208ENST00000520857 GCFC2P16383 781 aaKnown RBP13.96□□□□□ -0.18
TRAPPC9-208ENST00000520857 RPS8P62241 208 aaKnown RBP13.96□□□□□ -0.18
TRAPPC9-208ENST00000520857 FMNL3Q8IVF7 1028 aa13.96□□□□□ -0.18
TRAPPC9-208ENST00000520857 SYCE1Q8N0S2 351 aa13.96□□□□□ -0.18
TRAPPC9-208ENST00000520857 PROM2Q8N271 834 aa13.96□□□□□ -0.18
TRAPPC9-208ENST00000520857 ZNF384Q8TF68 577 aa13.96□□□□□ -0.18
TRAPPC9-208ENST00000520857 CNOT10Q9H9A5 744 aaKnown RBP13.96□□□□□ -0.18
TRAPPC9-208ENST00000520857 MCM8Q9UJA3 840 aa13.96□□□□□ -0.18
TRAPPC9-208ENST00000520857 CCDC169A6NNP5 214 aa13.95□□□□□ -0.18
TRAPPC9-208ENST00000520857 DR1Q01658 176 aa13.95□□□□□ -0.18
TRAPPC9-208ENST00000520857 IKQ13123 557 aaPredicted RBP13.95□□□□□ -0.18
TRAPPC9-208ENST00000520857 PICALMQ13492 652 aa13.95□□□□□ -0.18
TRAPPC9-208ENST00000520857 ARHGAP44Q17R89 818 aa13.95□□□□□ -0.18
TRAPPC9-208ENST00000520857 C12orf60Q5U649 245 aa13.95□□□□□ -0.18
TRAPPC9-208ENST00000520857 ZNF571Q7Z3V5 609 aaPredicted RBP13.95□□□□□ -0.18
TRAPPC9-208ENST00000520857 MIEF2Q96C03 454 aa13.95□□□□□ -0.18
TRAPPC9-208ENST00000520857 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.95□□□□□ -0.186e-7■■■■■ 241.2
TRAPPC9-208ENST00000520857 MTRF1LQ9UGC7 380 aaKnown RBP13.95□□□□□ -0.18
TRAPPC9-208ENST00000520857 ATXN2Q99700 1313 aaKnown RBP13.95□□□□□ -0.18
TRAPPC9-208ENST00000520857 CCT8L1PA6NM43 557 aa13.95□□□□□ -0.18
TRAPPC9-208ENST00000520857 MEIS1O00470 390 aa13.95□□□□□ -0.18
TRAPPC9-208ENST00000520857 CDC25CP30307 473 aa13.95□□□□□ -0.18
TRAPPC9-208ENST00000520857 KCNQ4P56696 695 aa13.95□□□□□ -0.18
TRAPPC9-208ENST00000520857 SMIM5Q71RC9 77 aa13.95□□□□□ -0.18
TRAPPC9-208ENST00000520857 STAMBPL1Q96FJ0 436 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms