RNA–Protein interactions for RNA: ENST00000520561.1

CSMD1-208, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-208ENST00000520561 HSD17B14Q9BPX1 270 aa10.01□□□□□ -0.81
CSMD1-208ENST00000520561 ZSWIM4Q9H7M6 989 aa10.01□□□□□ -0.81
CSMD1-208ENST00000520561 GABBR1Q9UBS5 961 aa10.01□□□□□ -0.81
CSMD1-208ENST00000520561 TSKSQ9UJT2 592 aa10.01□□□□□ -0.81
CSMD1-208ENST00000520561 DNM3Q9UQ16 869 aa10.01□□□□□ -0.81
CSMD1-208ENST00000520561 LOXHD1Q8IVV2 1947 aa10.01□□□□□ -0.81
CSMD1-208ENST00000520561 IGSF9BQ9UPX0 1349 aa10.01□□□□□ -0.81
CSMD1-208ENST00000520561 DOCK5Q9H7D0 1870 aa10□□□□□ -0.81
CSMD1-208ENST00000520561 SYCE3A1L190 88 aa10□□□□□ -0.81
CSMD1-208ENST00000520561 SLITRK3O94933 977 aa10□□□□□ -0.81
CSMD1-208ENST00000520561 EYA4O95677 639 aa10□□□□□ -0.81
CSMD1-208ENST00000520561 SSBP05455 408 aaKnown RBP eCLIP10□□□□□ -0.81
CSMD1-208ENST00000520561 ZNF865P0CJ78 1059 aaPredicted RBP10□□□□□ -0.81
CSMD1-208ENST00000520561 AKR1A1P14550 325 aa10□□□□□ -0.81
CSMD1-208ENST00000520561 TNFAIP2Q03169 654 aa10□□□□□ -0.81
CSMD1-208ENST00000520561 ARHGAP1Q07960 439 aa10□□□□□ -0.81
CSMD1-208ENST00000520561 PNOCQ13519 176 aa10□□□□□ -0.81
CSMD1-208ENST00000520561 LAMC2Q13753 1193 aa10□□□□□ -0.81
CSMD1-208ENST00000520561 DHX8Q14562 1220 aaKnown RBP10□□□□□ -0.81
CSMD1-208ENST00000520561 MCM6Q14566 821 aa10□□□□□ -0.81
CSMD1-208ENST00000520561 ECM1Q16610 540 aa10□□□□□ -0.81
CSMD1-208ENST00000520561 CCDC144BQ3MJ40 725 aa10□□□□□ -0.81
CSMD1-208ENST00000520561 DUSP28Q4G0W2 176 aa10□□□□□ -0.81
CSMD1-208ENST00000520561 SASS6Q6UVJ0 657 aa10□□□□□ -0.81
CSMD1-208ENST00000520561 ABHD15Q6UXT9 468 aa10□□□□□ -0.81
CSMD1-208ENST00000520561 RBM43Q6ZSC3 357 aaKnown RBP10□□□□□ -0.81
CSMD1-208ENST00000520561 SV2BQ7L1I2 683 aa10□□□□□ -0.81
CSMD1-208ENST00000520561 KCNK18Q7Z418 384 aa10□□□□□ -0.81
CSMD1-208ENST00000520561 C4orf19Q8IY42 314 aa10□□□□□ -0.81
CSMD1-208ENST00000520561 GRAMD1CQ8IYS0 662 aa10□□□□□ -0.81
CSMD1-208ENST00000520561 OR6J1Q8NGC5 347 aa10□□□□□ -0.81
CSMD1-208ENST00000520561 SEPT1Q8WYJ6 367 aa10□□□□□ -0.81
CSMD1-208ENST00000520561 COPS5Q92905 334 aa10□□□□□ -0.81
CSMD1-208ENST00000520561 SMARCE1Q969G3 411 aa10□□□□□ -0.81
CSMD1-208ENST00000520561 CCDC47Q96A33 483 aaKnown RBP10□□□□□ -0.81
CSMD1-208ENST00000520561 EMID1Q96A84 441 aaPredicted RBP10□□□□□ -0.81
CSMD1-208ENST00000520561 PAGE5Q96GU1 130 aa10□□□□□ -0.81
CSMD1-208ENST00000520561 SPATA33Q96N06 139 aa10□□□□□ -0.81
CSMD1-208ENST00000520561 NACC1Q96RE7 527 aa10□□□□□ -0.81
CSMD1-208ENST00000520561 AZI2Q9H6S1 392 aa10□□□□□ -0.81
CSMD1-208ENST00000520561 ZNF302Q9NR11 478 aa10□□□□□ -0.81
CSMD1-208ENST00000520561 BLOC1S4Q9NUP1 217 aa10□□□□□ -0.81
CSMD1-208ENST00000520561 KBTBD4Q9NVX7 518 aa10□□□□□ -0.81
CSMD1-208ENST00000520561 WBP1LQ9NX94 342 aa10□□□□□ -0.81
CSMD1-208ENST00000520561 FAM184BQ9ULE4 1060 aa10□□□□□ -0.81
CSMD1-208ENST00000520561 DOCK3Q8IZD9 2030 aa9.99□□□□□ -0.81
CSMD1-208ENST00000520561 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.99□□□□□ -0.81
CSMD1-208ENST00000520561 ARHGEF35A5YM69 484 aa9.99□□□□□ -0.81
CSMD1-208ENST00000520561 E9PMD0 336 aa9.99□□□□□ -0.81
CSMD1-208ENST00000520561 ADCY3O60266 1144 aa9.99□□□□□ -0.81
CSMD1-208ENST00000520561 ATG7O95352 703 aa9.99□□□□□ -0.81
CSMD1-208ENST00000520561 LYPLA2O95372 231 aa9.99□□□□□ -0.81
CSMD1-208ENST00000520561 IGHA2P01877 340 aa9.99□□□□□ -0.81
CSMD1-208ENST00000520561 HMGCRP04035 888 aa9.99□□□□□ -0.81
CSMD1-208ENST00000520561 KRT18P05783 430 aaKnown RBP9.99□□□□□ -0.81
CSMD1-208ENST00000520561 PRR29P0C7W0 189 aa9.99□□□□□ -0.81
CSMD1-208ENST00000520561 PLA2G4BP0C869 781 aa9.99□□□□□ -0.81
CSMD1-208ENST00000520561 CCDC192P0DO97 292 aa9.99□□□□□ -0.81
CSMD1-208ENST00000520561 SMPD1P17405 629 aa9.99□□□□□ -0.81
CSMD1-208ENST00000520561 TCF7P36402 384 aaPredicted RBP9.99□□□□□ -0.81
CSMD1-208ENST00000520561 CAP1Q01518 475 aa9.99□□□□□ -0.81
CSMD1-208ENST00000520561 PRKCEQ02156 737 aa9.99□□□□□ -0.81
CSMD1-208ENST00000520561 UGCGQ16739 394 aa9.99□□□□□ -0.81
CSMD1-208ENST00000520561 SWSAP1Q6NVH7 229 aa9.99□□□□□ -0.81
CSMD1-208ENST00000520561 SH3RF1Q7Z6J0 888 aa9.99□□□□□ -0.81
CSMD1-208ENST00000520561 TLK2Q86UE8 772 aa9.99□□□□□ -0.81
CSMD1-208ENST00000520561 GPBP1Q86WP2 473 aa9.99□□□□□ -0.81
CSMD1-208ENST00000520561 CCDC60Q8IWA6 550 aaPredicted RBP9.99□□□□□ -0.81
CSMD1-208ENST00000520561 SLAIN1Q8ND83 568 aa9.99□□□□□ -0.81
CSMD1-208ENST00000520561 PPTC7Q8NI37 304 aa9.99□□□□□ -0.81
CSMD1-208ENST00000520561 FAM167AQ96KS9 214 aa9.99□□□□□ -0.81
CSMD1-208ENST00000520561 GPR20Q99678 358 aa9.99□□□□□ -0.81
CSMD1-208ENST00000520561 BHMT2Q9H2M3 363 aa9.99□□□□□ -0.81
CSMD1-208ENST00000520561 BCAS3Q9H6U6 928 aa9.99□□□□□ -0.81
CSMD1-208ENST00000520561 BMP2KQ9NSY1 1161 aaPredicted RBP9.99□□□□□ -0.81
CSMD1-208ENST00000520561 KIAA1468Q9P260 1216 aa9.99□□□□□ -0.81
CSMD1-208ENST00000520561 TRIM17Q9Y577 477 aa9.99□□□□□ -0.81
CSMD1-208ENST00000520561 EMSYQ7Z589 1322 aa9.99□□□□□ -0.81
CSMD1-208ENST00000520561 FOXN1O15353 648 aa9.98□□□□□ -0.81
CSMD1-208ENST00000520561 OATP04181 439 aa9.98□□□□□ -0.81
CSMD1-208ENST00000520561 CYBAP13498 195 aa9.98□□□□□ -0.81
CSMD1-208ENST00000520561 PRKAR2AP13861 404 aaKnown RBP9.98□□□□□ -0.81
CSMD1-208ENST00000520561 ELNP15502 786 aa9.98□□□□□ -0.81
CSMD1-208ENST00000520561 YWHABP31946 246 aaKnown RBP9.98□□□□□ -0.81
CSMD1-208ENST00000520561 STAT5BP51692 787 aa9.98□□□□□ -0.81
CSMD1-208ENST00000520561 ZNF445P59923 1031 aa9.98□□□□□ -0.81
CSMD1-208ENST00000520561 ASIC1P78348 528 aa9.98□□□□□ -0.81
CSMD1-208ENST00000520561 STX1AQ16623 288 aa9.98□□□□□ -0.81
CSMD1-208ENST00000520561 HSDL1Q3SXM5 330 aa9.98□□□□□ -0.81
CSMD1-208ENST00000520561 BRDTQ58F21 947 aaPredicted RBP9.98□□□□□ -0.81
CSMD1-208ENST00000520561 PRAMEF19Q5SWL8 479 aa9.98□□□□□ -0.81
CSMD1-208ENST00000520561 GJC2Q5T442 439 aaPredicted RBP9.98□□□□□ -0.81
CSMD1-208ENST00000520561 UTP14CQ5TAP6 766 aaKnown RBP9.98□□□□□ -0.81
CSMD1-208ENST00000520561 OTUD6AQ7L8S5 288 aa9.98□□□□□ -0.81
CSMD1-208ENST00000520561 PXYLP1Q8TE99 480 aa9.98□□□□□ -0.81
CSMD1-208ENST00000520561 AFAP1L1Q8TED9 768 aa9.98□□□□□ -0.81
CSMD1-208ENST00000520561 PIGOQ8TEQ8 1089 aa9.98□□□□□ -0.81
CSMD1-208ENST00000520561 LRRC15Q8TF66 581 aa9.98□□□□□ -0.81
CSMD1-208ENST00000520561 STAMQ92783 540 aa9.98□□□□□ -0.81
CSMD1-208ENST00000520561 ERCC4Q92889 916 aaPredicted RBP9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms