RNA–Protein interactions for RNA: ENST00000519489.1

CTNNA1-216, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-216ENST00000519489 AFG1LQ8WV93 481 aa8.22□□□□□ -1.09
CTNNA1-216ENST00000519489 SLC6A16Q9GZN6 736 aa8.22□□□□□ -1.09
CTNNA1-216ENST00000519489 ARHGEF10LQ9HCE6 1279 aa8.22□□□□□ -1.09
CTNNA1-216ENST00000519489 SIT1Q9Y3P8 196 aa8.22□□□□□ -1.09
CTNNA1-216ENST00000519489 PCDHGA2Q9Y5H1 932 aa8.22□□□□□ -1.09
CTNNA1-216ENST00000519489 EOMESO95936 686 aa8.21□□□□□ -1.1
CTNNA1-216ENST00000519489 THPOP40225 353 aa8.21□□□□□ -1.1
CTNNA1-216ENST00000519489 USP5P45974 858 aa8.21□□□□□ -1.1
CTNNA1-216ENST00000519489 CALD1Q05682 793 aaKnown RBP8.21□□□□□ -1.1
CTNNA1-216ENST00000519489 SRSF1Q07955 248 aaKnown RBP eCLIP8.21□□□□□ -1.1
CTNNA1-216ENST00000519489 MVPQ14764 893 aaKnown RBP8.21□□□□□ -1.1
CTNNA1-216ENST00000519489 ZNF598Q86UK7 904 aaKnown RBP8.21□□□□□ -1.1
CTNNA1-216ENST00000519489 RDH13Q8NBN7 331 aa8.21□□□□□ -1.1
CTNNA1-216ENST00000519489 LINC01599Q8WXQ3 324 aa8.21□□□□□ -1.1
CTNNA1-216ENST00000519489 SEPT8Q92599 483 aa8.21□□□□□ -1.1
CTNNA1-216ENST00000519489 CYP39A1Q9NYL5 469 aa8.21□□□□□ -1.1
CTNNA1-216ENST00000519489 WNT16Q9UBV4 365 aa8.21□□□□□ -1.1
CTNNA1-216ENST00000519489 FBXO40Q9UH90 709 aa8.21□□□□□ -1.1
CTNNA1-216ENST00000519489 COG6Q9Y2V7 657 aa8.21□□□□□ -1.1
CTNNA1-216ENST00000519489 MTF2Q9Y483 593 aaPredicted RBP8.21□□□□□ -1.1
CTNNA1-216ENST00000519489 EMSYQ7Z589 1322 aa8.21□□□□□ -1.1
CTNNA1-216ENST00000519489 ADAMTS20P59510 1910 aa8.21□□□□□ -1.1
CTNNA1-216ENST00000519489 MYO9AB2RTY4 2548 aa8.2□□□□□ -1.1
CTNNA1-216ENST00000519489 DDX11L8A8MPP1 907 aa8.2□□□□□ -1.1
CTNNA1-216ENST00000519489 HAS3O00219 553 aa8.2□□□□□ -1.1
CTNNA1-216ENST00000519489 ENPP3O14638 875 aa8.2□□□□□ -1.1
CTNNA1-216ENST00000519489 RAD21O60216 631 aa8.2□□□□□ -1.1
CTNNA1-216ENST00000519489 TBC1D4O60343 1298 aa8.2□□□□□ -1.1
CTNNA1-216ENST00000519489 KPNA6O60684 536 aa8.2□□□□□ -1.1
CTNNA1-216ENST00000519489 N4BP1O75113 896 aaKnown RBP8.2□□□□□ -1.1
CTNNA1-216ENST00000519489 ZBED4O75132 1171 aa8.2□□□□□ -1.1
CTNNA1-216ENST00000519489 CTSHP09668 335 aa8.2□□□□□ -1.1
CTNNA1-216ENST00000519489 CYP7A1P22680 504 aa8.2□□□□□ -1.1
CTNNA1-216ENST00000519489 PRR20EP86478 221 aa8.2□□□□□ -1.1
CTNNA1-216ENST00000519489 PRR20CP86479 221 aa8.2□□□□□ -1.1
CTNNA1-216ENST00000519489 PRR20DP86480 221 aa8.2□□□□□ -1.1
CTNNA1-216ENST00000519489 PRR20BP86481 221 aa8.2□□□□□ -1.1
CTNNA1-216ENST00000519489 PRR20AP86496 221 aa8.2□□□□□ -1.1
CTNNA1-216ENST00000519489 FOXC1Q12948 553 aa8.2□□□□□ -1.1
CTNNA1-216ENST00000519489 NAALADL2Q58DX5 795 aa8.2□□□□□ -1.1
CTNNA1-216ENST00000519489 PHLDB3Q6NSJ2 640 aa8.2□□□□□ -1.1
CTNNA1-216ENST00000519489 SERINC5Q86VE9 423 aa8.2□□□□□ -1.1
CTNNA1-216ENST00000519489 PRPF38AQ8NAV1 312 aaKnown RBP8.2□□□□□ -1.1
CTNNA1-216ENST00000519489 RASGRP4Q8TDF6 673 aa8.2□□□□□ -1.1
CTNNA1-216ENST00000519489 MICAL1Q8TDZ2 1067 aa8.2□□□□□ -1.1
CTNNA1-216ENST00000519489 ATRIPQ8WXE1 791 aa8.2□□□□□ -1.1
CTNNA1-216ENST00000519489 SECISBP2LQ93073 1101 aaKnown RBP8.2□□□□□ -1.1
CTNNA1-216ENST00000519489 KIFC2Q96AC6 838 aa8.2□□□□□ -1.1
CTNNA1-216ENST00000519489 CDCA3Q99618 268 aaPredicted RBP8.2□□□□□ -1.1
CTNNA1-216ENST00000519489 ALG1Q9BT22 464 aa8.2□□□□□ -1.1
CTNNA1-216ENST00000519489 LSM14BQ9BX40 385 aaKnown RBP8.2□□□□□ -1.1
CTNNA1-216ENST00000519489 ACAD9Q9H845 621 aa8.2□□□□□ -1.1
CTNNA1-216ENST00000519489 CYP26B1Q9NR63 512 aa8.2□□□□□ -1.1
CTNNA1-216ENST00000519489 RNF146Q9NTX7 359 aa8.2□□□□□ -1.1
CTNNA1-216ENST00000519489 ZSCAN32Q9NX65 697 aa8.2□□□□□ -1.1
CTNNA1-216ENST00000519489 FBXO4Q9UKT5 387 aa8.2□□□□□ -1.1
CTNNA1-216ENST00000519489 ABCA12Q86UK0 2595 aa8.2□□□□□ -1.1
CTNNA1-216ENST00000519489 UBR5O95071 2799 aaPredicted RBP8.19□□□□□ -1.1
CTNNA1-216ENST00000519489 NDUFB10O96000 172 aa8.19□□□□□ -1.1
CTNNA1-216ENST00000519489 TDGF1P13385 188 aa8.19□□□□□ -1.1
CTNNA1-216ENST00000519489 HOXB8P17481 243 aaPredicted RBP8.19□□□□□ -1.1
CTNNA1-216ENST00000519489 GCGRP47871 477 aa8.19□□□□□ -1.1
CTNNA1-216ENST00000519489 SNAP25P60880 206 aa8.19□□□□□ -1.1
CTNNA1-216ENST00000519489 CSRP2Q16527 193 aa8.19□□□□□ -1.1
CTNNA1-216ENST00000519489 PAN2Q504Q3 1202 aaKnown RBP8.19□□□□□ -1.1
CTNNA1-216ENST00000519489 RTN4RL1Q86UN2 441 aaPredicted RBP8.19□□□□□ -1.1
CTNNA1-216ENST00000519489 GLIS3Q8NEA6 775 aa8.19□□□□□ -1.1
CTNNA1-216ENST00000519489 PJA1Q8NG27 643 aa8.19□□□□□ -1.1
CTNNA1-216ENST00000519489 GPR152Q8TDT2 470 aa8.19□□□□□ -1.1
CTNNA1-216ENST00000519489 NECTIN4Q96NY8 510 aa8.19□□□□□ -1.1
CTNNA1-216ENST00000519489 SPSB2Q99619 263 aa8.19□□□□□ -1.1
CTNNA1-216ENST00000519489 RIOK1Q9BRS2 568 aaKnown RBP8.19□□□□□ -1.1
CTNNA1-216ENST00000519489 GMEB2Q9UKD1 530 aa8.19□□□□□ -1.1
CTNNA1-216ENST00000519489 USTQ9Y2C2 406 aa8.19□□□□□ -1.1
CTNNA1-216ENST00000519489 LCTP09848 1927 aa8.19□□□□□ -1.1
CTNNA1-216ENST00000519489 CYP2D7A0A087X1C5 515 aa8.18□□□□□ -1.1
CTNNA1-216ENST00000519489 TULP1O00294 542 aaPredicted RBP8.18□□□□□ -1.1
CTNNA1-216ENST00000519489 POLR3DP05423 398 aaPredicted RBP8.18□□□□□ -1.1
CTNNA1-216ENST00000519489 ARHGAP1Q07960 439 aa8.18□□□□□ -1.1
CTNNA1-216ENST00000519489 FUT2Q10981 343 aa8.18□□□□□ -1.1
CTNNA1-216ENST00000519489 RARS2Q5T160 578 aaKnown RBP8.18□□□□□ -1.1
CTNNA1-216ENST00000519489 PLPP4Q5VZY2 271 aa8.18□□□□□ -1.1
CTNNA1-216ENST00000519489 PSAPL1Q6NUJ1 521 aa8.18□□□□□ -1.1
CTNNA1-216ENST00000519489 CCDC62Q6P9F0 684 aa8.18□□□□□ -1.1
CTNNA1-216ENST00000519489 LIAT1Q6ZQX7 453 aa8.18□□□□□ -1.1
CTNNA1-216ENST00000519489 LRRC47Q8N1G4 583 aaKnown RBP8.18□□□□□ -1.1
CTNNA1-216ENST00000519489 PIK3R5Q8WYR1 880 aa8.18□□□□□ -1.1
CTNNA1-216ENST00000519489 DDX1Q92499 740 aaKnown RBP8.18□□□□□ -1.1
CTNNA1-216ENST00000519489 THAP11Q96EK4 314 aa8.18□□□□□ -1.1
CTNNA1-216ENST00000519489 NEUROD6Q96NK8 337 aa8.18□□□□□ -1.1
CTNNA1-216ENST00000519489 SCNM1Q9BWG6 230 aa8.18□□□□□ -1.1
CTNNA1-216ENST00000519489 SH2D4AQ9H788 454 aa8.18□□□□□ -1.1
CTNNA1-216ENST00000519489 SPATA6Q9NWH7 488 aaPredicted RBP8.18□□□□□ -1.1
CTNNA1-216ENST00000519489 HCFC2Q9Y5Z7 792 aa8.18□□□□□ -1.1
CTNNA1-216ENST00000519489 MYH1P12882 1939 aa8.18□□□□□ -1.1
CTNNA1-216ENST00000519489 COL12A1Q99715 3063 aa8.17□□□□□ -1.1
CTNNA1-216ENST00000519489 F5H6K3 240 aa8.17□□□□□ -1.1
CTNNA1-216ENST00000519489 ARHGAP6O43182 974 aa8.17□□□□□ -1.1
CTNNA1-216ENST00000519489 LAMTOR5O43504 91 aa8.17□□□□□ -1.1
CTNNA1-216ENST00000519489 RETP07949 1114 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms