RNA–Protein interactions for RNA: ENST00000519485.1

CSMD3-209, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 3

Gene CSMD3, Length 452 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-209ENST00000519485 A0A087X1B8 175 aa4.82□□□□□ -1.64
CSMD3-209ENST00000519485 SLC27A2O14975 620 aa4.82□□□□□ -1.64
CSMD3-209ENST00000519485 SMAD7O15105 426 aaKnown RBP4.82□□□□□ -1.64
CSMD3-209ENST00000519485 IL18BPO95998 194 aa4.82□□□□□ -1.64
CSMD3-209ENST00000519485 ZNF888P0CJ79 500 aaPredicted RBP4.82□□□□□ -1.64
CSMD3-209ENST00000519485 CR2P20023 1033 aa4.82□□□□□ -1.64
CSMD3-209ENST00000519485 KCNJ6P48051 423 aa4.82□□□□□ -1.64
CSMD3-209ENST00000519485 NANOS3P60323 173 aaKnown RBP4.82□□□□□ -1.64
CSMD3-209ENST00000519485 PFKPQ01813 784 aa4.82□□□□□ -1.64
CSMD3-209ENST00000519485 TOP3AQ13472 1001 aaPredicted RBP4.82□□□□□ -1.64
CSMD3-209ENST00000519485 NFYCQ13952 458 aa4.82□□□□□ -1.64
CSMD3-209ENST00000519485 TNNI3KQ59H18 835 aa4.82□□□□□ -1.64
CSMD3-209ENST00000519485 PHF19Q5T6S3 580 aa4.82□□□□□ -1.64
CSMD3-209ENST00000519485 C6orf15Q6UXA7 325 aaPredicted RBP4.82□□□□□ -1.64
CSMD3-209ENST00000519485 FAM178BQ8IXR5 827 aa4.82□□□□□ -1.64
CSMD3-209ENST00000519485 IL17DQ8TAD2 202 aa4.82□□□□□ -1.64
CSMD3-209ENST00000519485 EPN3Q9H201 632 aa4.82□□□□□ -1.64
CSMD3-209ENST00000519485 ZNF703Q9H7S9 590 aaPredicted RBP4.82□□□□□ -1.64
CSMD3-209ENST00000519485 AURKAIP1Q9NWT8 199 aaPredicted RBP4.82□□□□□ -1.64
CSMD3-209ENST00000519485 ACTR10Q9NZ32 417 aa4.82□□□□□ -1.64
CSMD3-209ENST00000519485 LRP2BPQ9P2M1 347 aa4.82□□□□□ -1.64
CSMD3-209ENST00000519485 RSF1Q96T23 1441 aaPredicted RBP4.81□□□□□ -1.64
CSMD3-209ENST00000519485 DDAH1O94760 285 aa4.81□□□□□ -1.64
CSMD3-209ENST00000519485 GRIN1Q05586 938 aa4.81□□□□□ -1.64
CSMD3-209ENST00000519485 TUSC3Q13454 348 aa4.81□□□□□ -1.64
CSMD3-209ENST00000519485 KRTAP15-1Q3LI76 137 aa4.81□□□□□ -1.64
CSMD3-209ENST00000519485 ZMAT1Q5H9K5 638 aa4.81□□□□□ -1.64
CSMD3-209ENST00000519485 LDLRAD3Q86YD5 345 aa4.81□□□□□ -1.64
CSMD3-209ENST00000519485 C1orf210Q8IVY1 113 aa4.81□□□□□ -1.64
CSMD3-209ENST00000519485 JAM3Q9BX67 310 aa4.81□□□□□ -1.64
CSMD3-209ENST00000519485 MATN2O00339 956 aa4.8□□□□□ -1.64
CSMD3-209ENST00000519485 C1SP09871 688 aa4.8□□□□□ -1.64
CSMD3-209ENST00000519485 ETFBP38117 255 aa4.8□□□□□ -1.64
CSMD3-209ENST00000519485 RPS19P39019 145 aaKnown RBP4.8□□□□□ -1.64
CSMD3-209ENST00000519485 DGCR2P98153 550 aa4.8□□□□□ -1.64
CSMD3-209ENST00000519485 RNF151Q2KHN1 245 aa4.8□□□□□ -1.64
CSMD3-209ENST00000519485 FNDC7Q5VTL7 733 aa4.8□□□□□ -1.64
CSMD3-209ENST00000519485 PCSK4Q6UW60 755 aa4.8□□□□□ -1.64
CSMD3-209ENST00000519485 MICAL1Q8TDZ2 1067 aa4.8□□□□□ -1.64
CSMD3-209ENST00000519485 KCTD13Q8WZ19 329 aa4.8□□□□□ -1.64
CSMD3-209ENST00000519485 SCYL1Q96KG9 808 aa4.8□□□□□ -1.64
CSMD3-209ENST00000519485 TINF2Q9BSI4 451 aa4.8□□□□□ -1.64
CSMD3-209ENST00000519485 PRKAG3Q9UGI9 489 aa4.8□□□□□ -1.64
CSMD3-209ENST00000519485 PTPN22Q9Y2R2 807 aa4.8□□□□□ -1.64
CSMD3-209ENST00000519485 TNIKQ9UKE5 1360 aa4.79□□□□□ -1.64
CSMD3-209ENST00000519485 ETV4P43268 484 aa4.79□□□□□ -1.64
CSMD3-209ENST00000519485 GLRBP48167 497 aa4.79□□□□□ -1.64
CSMD3-209ENST00000519485 SPIRE1Q08AE8 756 aa4.79□□□□□ -1.64
CSMD3-209ENST00000519485 TUBA3CQ13748 450 aa4.79□□□□□ -1.64
CSMD3-209ENST00000519485 FXNQ16595 210 aa4.79□□□□□ -1.64
CSMD3-209ENST00000519485 TUBA3EQ6PEY2 450 aa4.79□□□□□ -1.64
CSMD3-209ENST00000519485 DPP8Q6V1X1 898 aaPredicted RBP4.79□□□□□ -1.64
CSMD3-209ENST00000519485 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.79□□□□□ -1.64
CSMD3-209ENST00000519485 FAM9AQ8IZU1 332 aaPredicted RBP4.79□□□□□ -1.64
CSMD3-209ENST00000519485 ZFYVE21Q9BQ24 234 aa4.79□□□□□ -1.64
CSMD3-209ENST00000519485 ZNF408Q9H9D4 720 aa4.79□□□□□ -1.64
CSMD3-209ENST00000519485 PPP1R1BQ9UD71 204 aaPredicted RBP4.79□□□□□ -1.64
CSMD3-209ENST00000519485 TELO2Q9Y4R8 837 aa4.79□□□□□ -1.64
CSMD3-209ENST00000519485 MSCO60682 206 aa4.78□□□□□ -1.64
CSMD3-209ENST00000519485 KIZQ2M2Z5 673 aa4.78□□□□□ -1.64
CSMD3-209ENST00000519485 MRM1Q6IN84 353 aaKnown RBP4.78□□□□□ -1.64
CSMD3-209ENST00000519485 NEU4Q8WWR8 484 aaPredicted RBP4.78□□□□□ -1.64
CSMD3-209ENST00000519485 PLEKHG4BQ96PX9 1271 aa4.78□□□□□ -1.64
CSMD3-209ENST00000519485 PRRX2Q99811 253 aa4.78□□□□□ -1.64
CSMD3-209ENST00000519485 TACO1Q9BSH4 297 aaKnown RBP4.78□□□□□ -1.64
CSMD3-209ENST00000519485 PPARGC1AQ9UBK2 798 aaKnown RBP4.78□□□□□ -1.64
CSMD3-209ENST00000519485 PCSK5Q92824 1860 aa4.77□□□□□ -1.65
CSMD3-209ENST00000519485 B2RBV5 119 aa4.77□□□□□ -1.65
CSMD3-209ENST00000519485 ACOT7O00154 380 aa4.77□□□□□ -1.65
CSMD3-209ENST00000519485 CDC14BO60729 498 aa4.77□□□□□ -1.65
CSMD3-209ENST00000519485 LTFP02788 710 aa4.77□□□□□ -1.65
CSMD3-209ENST00000519485 ADH4P08319 380 aa4.77□□□□□ -1.65
CSMD3-209ENST00000519485 FGRP09769 529 aa4.77□□□□□ -1.65
CSMD3-209ENST00000519485 MAKP20794 623 aa4.77□□□□□ -1.65
CSMD3-209ENST00000519485 GRK2P25098 689 aa4.77□□□□□ -1.65
CSMD3-209ENST00000519485 GRK3P35626 688 aa4.77□□□□□ -1.65
CSMD3-209ENST00000519485 PPP2R2AP63151 447 aa4.77□□□□□ -1.65
CSMD3-209ENST00000519485 LBX2Q6XYB7 198 aa4.77□□□□□ -1.65
CSMD3-209ENST00000519485 KCTD1Q719H9 257 aa4.77□□□□□ -1.65
CSMD3-209ENST00000519485 CXXC5Q7LFL8 322 aaKnown RBP4.77□□□□□ -1.65
CSMD3-209ENST00000519485 MCF2L2Q86YR7 1114 aa4.77□□□□□ -1.65
CSMD3-209ENST00000519485 DNAJC10Q8IXB1 793 aa4.77□□□□□ -1.65
CSMD3-209ENST00000519485 ZNF483Q8TF39 744 aaPredicted RBP4.77□□□□□ -1.65
CSMD3-209ENST00000519485 CFHR4Q92496 578 aa4.77□□□□□ -1.65
CSMD3-209ENST00000519485 DPYSL5Q9BPU6 564 aa4.77□□□□□ -1.65
CSMD3-209ENST00000519485 PHF20Q9BVI0 1012 aa4.77□□□□□ -1.65
CSMD3-209ENST00000519485 PLA2G12BQ9BX93 195 aa4.77□□□□□ -1.65
CSMD3-209ENST00000519485 DSEQ9UL01 958 aa4.77□□□□□ -1.65
CSMD3-209ENST00000519485 PMS2P1A4D2B8 440 aa4.76□□□□□ -1.65
CSMD3-209ENST00000519485 AGRPO00253 132 aa4.76□□□□□ -1.65
CSMD3-209ENST00000519485 ARHGAP6O43182 974 aa4.76□□□□□ -1.65
CSMD3-209ENST00000519485 DLX3O60479 287 aa4.76□□□□□ -1.65
CSMD3-209ENST00000519485 PPFIA2O75334 1257 aa4.76□□□□□ -1.65
CSMD3-209ENST00000519485 PEX11BO96011 259 aa4.76□□□□□ -1.65
CSMD3-209ENST00000519485 GNAT1P11488 350 aa4.76□□□□□ -1.65
CSMD3-209ENST00000519485 GRIA2P42262 883 aa4.76□□□□□ -1.65
CSMD3-209ENST00000519485 ZC3H6P61129 1189 aaKnown RBP4.76□□□□□ -1.65
CSMD3-209ENST00000519485 DBPQ10586 325 aaPredicted RBP4.76□□□□□ -1.65
CSMD3-209ENST00000519485 ANKS3Q6ZW76 656 aa4.76□□□□□ -1.65
CSMD3-209ENST00000519485 EEPD1Q7L9B9 569 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms