RNA–Protein interactions for RNA: ENST00000519481.5

PVT1-208, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 542 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-208ENST00000519481 IL17RAQ96F46 866 aa12.42□□□□□ -0.42
PVT1-208ENST00000519481 KCNH7Q9NS40 1196 aa12.42□□□□□ -0.42
PVT1-208ENST00000519481 TRPC6Q9Y210 931 aa12.42□□□□□ -0.42
PVT1-208ENST00000519481 V9GY48 417 aaPredicted RBP12.42□□□□□ -0.42
PVT1-208ENST00000519481 DOCK5Q9H7D0 1870 aa12.42□□□□□ -0.42
PVT1-208ENST00000519481 NFASCO94856 1347 aa12.41□□□□□ -0.42
PVT1-208ENST00000519481 CNTNAP5Q8WYK1 1306 aa12.41□□□□□ -0.42
PVT1-208ENST00000519481 KLF18A0A0U1RQI7 1052 aa12.41□□□□□ -0.42
PVT1-208ENST00000519481 CCDC196A0A1B0GTZ2 297 aa12.41□□□□□ -0.42
PVT1-208ENST00000519481 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.41□□□□□ -0.42
PVT1-208ENST00000519481 SMCO2A6NFE2 343 aa12.41□□□□□ -0.42
PVT1-208ENST00000519481 CHRNA1P02708 482 aa12.41□□□□□ -0.42
PVT1-208ENST00000519481 RCAN1P53805 252 aa12.41□□□□□ -0.42
PVT1-208ENST00000519481 EXOSC10Q01780 885 aaKnown RBP12.41□□□□□ -0.42
PVT1-208ENST00000519481 AP3B2Q13367 1082 aa12.41□□□□□ -0.42
PVT1-208ENST00000519481 GPM6BQ13491 265 aa12.41□□□□□ -0.42
PVT1-208ENST00000519481 COL9A3Q14050 684 aaPredicted RBP12.41□□□□□ -0.42
PVT1-208ENST00000519481 TSGA10IPQ3SY00 556 aa12.41□□□□□ -0.42
PVT1-208ENST00000519481 TIGD5Q53EQ6 642 aa12.41□□□□□ -0.42
PVT1-208ENST00000519481 CEP55Q53EZ4 464 aa12.41□□□□□ -0.42
PVT1-208ENST00000519481 RUFY4Q6ZNE9 571 aa12.41□□□□□ -0.42
PVT1-208ENST00000519481 TMEM192Q8IY95 271 aa12.41□□□□□ -0.42
PVT1-208ENST00000519481 FIBCD1Q8N539 461 aa12.41□□□□□ -0.42
PVT1-208ENST00000519481 DNAJB3Q8WWF6 145 aa12.41□□□□□ -0.42
PVT1-208ENST00000519481 TCEANC2Q96MN5 208 aa12.41□□□□□ -0.42
PVT1-208ENST00000519481 C1QTNF1Q9BXJ1 281 aa12.41□□□□□ -0.42
PVT1-208ENST00000519481 ANO3Q9BYT9 981 aa12.41□□□□□ -0.42
PVT1-208ENST00000519481 UBE2ZQ9H832 354 aaPredicted RBP12.41□□□□□ -0.42
PVT1-208ENST00000519481 RWDD3Q9Y3V2 267 aa12.41□□□□□ -0.42
PVT1-208ENST00000519481 MBLAC1A4D2B0 266 aaPredicted RBP12.4□□□□□ -0.42
PVT1-208ENST00000519481 H3BNC9 293 aa12.4□□□□□ -0.42
PVT1-208ENST00000519481 INSRRP14616 1297 aa12.4□□□□□ -0.42
PVT1-208ENST00000519481 COL9A1P20849 921 aa12.4□□□□□ -0.42
PVT1-208ENST00000519481 STAT5BP51692 787 aa12.4□□□□□ -0.42
PVT1-208ENST00000519481 ACTR2P61160 394 aa12.4□□□□□ -0.42
PVT1-208ENST00000519481 MRPS6P82932 125 aaKnown RBP12.4□□□□□ -0.42
PVT1-208ENST00000519481 MGAT3Q09327 533 aa12.4□□□□□ -0.42
PVT1-208ENST00000519481 MCTP2Q6DN12 878 aa12.4□□□□□ -0.42
PVT1-208ENST00000519481 TSHZ1Q6ZSZ6 1077 aa12.4□□□□□ -0.42
PVT1-208ENST00000519481 PLPPR4Q7Z2D5 763 aa12.4□□□□□ -0.42
PVT1-208ENST00000519481 CCDC12Q8WUD4 166 aaPredicted RBP12.4□□□□□ -0.42
PVT1-208ENST00000519481 OSBPL7Q9BZF2 842 aa12.4□□□□□ -0.42
PVT1-208ENST00000519481 FAM49AQ9H0Q0 323 aaPredicted RBP12.4□□□□□ -0.42
PVT1-208ENST00000519481 BARHL2Q9NY43 387 aa12.4□□□□□ -0.42
PVT1-208ENST00000519481 CDY2AQ9Y6F7 541 aa12.4□□□□□ -0.42
PVT1-208ENST00000519481 COL4A4P53420 1690 aaPredicted RBP12.4□□□□□ -0.42
PVT1-208ENST00000519481 SIP14410 1827 aa12.39□□□□□ -0.43
PVT1-208ENST00000519481 STXBP3O00186 592 aa12.39□□□□□ -0.43
PVT1-208ENST00000519481 BACH1O14867 736 aa12.39□□□□□ -0.43
PVT1-208ENST00000519481 RB1P06400 928 aa12.39□□□□□ -0.43
PVT1-208ENST00000519481 KCNA5P22460 613 aa12.39□□□□□ -0.43
PVT1-208ENST00000519481 CTNNB1P35222 781 aa12.39□□□□□ -0.43
PVT1-208ENST00000519481 SREBF1P36956 1147 aa12.39□□□□□ -0.43
PVT1-208ENST00000519481 SLC26A2P50443 739 aa12.39□□□□□ -0.43
PVT1-208ENST00000519481 METAP2P50579 478 aaKnown RBP eCLIP12.39□□□□□ -0.43
PVT1-208ENST00000519481 LPIN1Q14693 890 aa12.39□□□□□ -0.43
PVT1-208ENST00000519481 FBXO47Q5MNV8 452 aa12.39□□□□□ -0.43
PVT1-208ENST00000519481 FAM160B1Q5W0V3 765 aa12.39□□□□□ -0.43
PVT1-208ENST00000519481 NIPA1Q7RTP0 329 aa12.39□□□□□ -0.43
PVT1-208ENST00000519481 BANK1Q8NDB2 785 aa12.39□□□□□ -0.43
PVT1-208ENST00000519481 PGBD1Q96JS3 809 aa12.39□□□□□ -0.43
PVT1-208ENST00000519481 FTHL17Q9BXU8 183 aa12.39□□□□□ -0.43
PVT1-208ENST00000519481 AGO4Q9HCK5 861 aaKnown RBP12.39□□□□□ -0.43
PVT1-208ENST00000519481 TCEAL9Q9UHQ7 104 aa12.39□□□□□ -0.43
PVT1-208ENST00000519481 BRPF3Q9ULD4 1205 aa12.39□□□□□ -0.43
PVT1-208ENST00000519481 TRPV2Q9Y5S1 764 aa12.39□□□□□ -0.43
PVT1-208ENST00000519481 SQORQ9Y6N5 450 aa12.39□□□□□ -0.43
PVT1-208ENST00000519481 BRWD1Q9NSI6 2320 aa12.39□□□□□ -0.43
PVT1-208ENST00000519481 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.38□□□□□ -0.43
PVT1-208ENST00000519481 POTEB3A0JP26 581 aa12.38□□□□□ -0.43
PVT1-208ENST00000519481 MEIS1O00470 390 aa12.38□□□□□ -0.43
PVT1-208ENST00000519481 ENPP3O14638 875 aa12.38□□□□□ -0.43
PVT1-208ENST00000519481 ARP10275 920 aa12.38□□□□□ -0.43
PVT1-208ENST00000519481 AKAP17AQ02040 695 aaKnown RBP12.38□□□□□ -0.43
PVT1-208ENST00000519481 FUT2Q10981 343 aa12.38□□□□□ -0.43
PVT1-208ENST00000519481 BTG3Q14201 252 aaPredicted RBP12.38□□□□□ -0.43
PVT1-208ENST00000519481 PUS10Q3MIT2 529 aaKnown RBP12.38□□□□□ -0.43
PVT1-208ENST00000519481 ADCK5Q3MIX3 580 aa12.38□□□□□ -0.43
PVT1-208ENST00000519481 LEXMQ3ZCV2 418 aa12.38□□□□□ -0.43
PVT1-208ENST00000519481 MARCH8Q5T0T0 291 aa12.38□□□□□ -0.43
PVT1-208ENST00000519481 TYW1BQ6NUM6 668 aa12.38□□□□□ -0.43
PVT1-208ENST00000519481 POTEBQ6S5H4 581 aa12.38□□□□□ -0.43
PVT1-208ENST00000519481 EP400NLQ6ZTU2 488 aa12.38□□□□□ -0.43
PVT1-208ENST00000519481 RASEFQ8IZ41 740 aa12.38□□□□□ -0.43
PVT1-208ENST00000519481 NME8Q8N427 588 aa12.38□□□□□ -0.43
PVT1-208ENST00000519481 CYP2W1Q8TAV3 490 aa12.38□□□□□ -0.43
PVT1-208ENST00000519481 PCYT2Q99447 389 aa12.38□□□□□ -0.43
PVT1-208ENST00000519481 C11orf84Q9BUA3 381 aaPredicted RBP12.38□□□□□ -0.43
PVT1-208ENST00000519481 NSUN3Q9H649 340 aaKnown RBP12.38□□□□□ -0.43
PVT1-208ENST00000519481 C6orf50Q9HD87 102 aa12.38□□□□□ -0.43
PVT1-208ENST00000519481 FAM50BQ9Y247 325 aa12.38□□□□□ -0.43
PVT1-208ENST00000519481 PCDHA2Q9Y5H9 948 aa12.38□□□□□ -0.43
PVT1-208ENST00000519481 ADGRA3Q8IWK6 1321 aa12.37□□□□□ -0.43
PVT1-208ENST00000519481 SMIM35A0A1B0GVV1 85 aa12.37□□□□□ -0.43
PVT1-208ENST00000519481 NCK2O43639 380 aa12.37□□□□□ -0.43
PVT1-208ENST00000519481 HBP1O60381 514 aa12.37□□□□□ -0.43
PVT1-208ENST00000519481 STAG3L1P0CL83 205 aa12.37□□□□□ -0.43
PVT1-208ENST00000519481 SCG2P13521 617 aa12.37□□□□□ -0.43
PVT1-208ENST00000519481 CD52P31358 61 aa12.37□□□□□ -0.43
PVT1-208ENST00000519481 ADD1P35611 737 aaKnown RBP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms