RNA–Protein interactions for RNA: ENST00000519474.5

HDAC3-215, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-215ENST00000519474 JPH1Q9HDC5 661 aaPredicted RBP10.64□□□□□ -0.71
HDAC3-215ENST00000519474 ERAP1Q9NZ08 941 aa10.64□□□□□ -0.71
HDAC3-215ENST00000519474 ZNF215Q9UL58 517 aaPredicted RBP10.64□□□□□ -0.71
HDAC3-215ENST00000519474 MBLAC1A4D2B0 266 aaPredicted RBP10.63□□□□□ -0.71
HDAC3-215ENST00000519474 IPO5O00410 1097 aaKnown RBP10.63□□□□□ -0.71
HDAC3-215ENST00000519474 CPLX1O14810 134 aa10.63□□□□□ -0.71
HDAC3-215ENST00000519474 PFKFB2O60825 505 aa10.63□□□□□ -0.71
HDAC3-215ENST00000519474 BAIAP3O94812 1187 aa10.63□□□□□ -0.71
HDAC3-215ENST00000519474 DEXIO95424 95 aa10.63□□□□□ -0.71
HDAC3-215ENST00000519474 CTDNEP1O95476 244 aa10.63□□□□□ -0.71
HDAC3-215ENST00000519474 CHRNA1P02708 482 aa10.63□□□□□ -0.71
HDAC3-215ENST00000519474 ATP4AP20648 1035 aa10.63□□□□□ -0.71
HDAC3-215ENST00000519474 STAT5BP51692 787 aa10.63□□□□□ -0.71
HDAC3-215ENST00000519474 AK2P54819 239 aa10.63□□□□□ -0.71
HDAC3-215ENST00000519474 WDR5P61964 334 aaKnown RBP10.63□□□□□ -0.71
HDAC3-215ENST00000519474 IKBKEQ14164 716 aa10.63□□□□□ -0.71
HDAC3-215ENST00000519474 PLCB4Q15147 1175 aa10.63□□□□□ -0.71
HDAC3-215ENST00000519474 NPY5RQ15761 445 aa10.63□□□□□ -0.71
HDAC3-215ENST00000519474 PLEKHG4Q58EX7 1191 aa10.63□□□□□ -0.71
HDAC3-215ENST00000519474 RUFY4Q6ZNE9 571 aa10.63□□□□□ -0.71
HDAC3-215ENST00000519474 TMCO2Q7Z6W1 182 aaPredicted RBP10.63□□□□□ -0.71
HDAC3-215ENST00000519474 HERC6Q8IVU3 1022 aa10.63□□□□□ -0.71
HDAC3-215ENST00000519474 REXO1Q8N1G1 1221 aaKnown RBP10.63□□□□□ -0.71
HDAC3-215ENST00000519474 BICD2Q8TD16 824 aa10.63□□□□□ -0.71
HDAC3-215ENST00000519474 SLKQ9H2G2 1235 aaPredicted RBP10.63□□□□□ -0.71
HDAC3-215ENST00000519474 PRDM12Q9H4Q4 367 aa10.63□□□□□ -0.71
HDAC3-215ENST00000519474 SLC28A3Q9HAS3 691 aa10.63□□□□□ -0.71
HDAC3-215ENST00000519474 PCDHA4Q9UN74 947 aa10.63□□□□□ -0.71
HDAC3-215ENST00000519474 EMSYQ7Z589 1322 aa10.62□□□□□ -0.71
HDAC3-215ENST00000519474 RRN3P2A6NIE6 340 aa10.62□□□□□ -0.71
HDAC3-215ENST00000519474 DDX39AO00148 427 aaKnown RBP10.62□□□□□ -0.71
HDAC3-215ENST00000519474 ARHGEF15O94989 841 aa10.62□□□□□ -0.71
HDAC3-215ENST00000519474 FDPSP14324 419 aaKnown RBP10.62□□□□□ -0.71
HDAC3-215ENST00000519474 DEFB103AP81534 67 aa10.62□□□□□ -0.71
HDAC3-215ENST00000519474 MKRN4PQ13434 485 aaPredicted RBP10.62□□□□□ -0.71
HDAC3-215ENST00000519474 ADGRE1Q14246 886 aa10.62□□□□□ -0.71
HDAC3-215ENST00000519474 GRIK4Q16099 956 aa10.62□□□□□ -0.71
HDAC3-215ENST00000519474 SWSAP1Q6NVH7 229 aa10.62□□□□□ -0.71
HDAC3-215ENST00000519474 CPLX2Q6PUV4 134 aaKnown RBP10.62□□□□□ -0.71
HDAC3-215ENST00000519474 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.62□□□□□ -0.71
HDAC3-215ENST00000519474 TRIM22Q8IYM9 498 aa10.62□□□□□ -0.71
HDAC3-215ENST00000519474 BLIDQ8IZY5 108 aa10.62□□□□□ -0.71
HDAC3-215ENST00000519474 CCDC148Q8NFR7 591 aa10.62□□□□□ -0.71
HDAC3-215ENST00000519474 TBCKQ8TEA7 893 aa10.62□□□□□ -0.71
HDAC3-215ENST00000519474 DNAJB3Q8WWF6 145 aa10.62□□□□□ -0.71
HDAC3-215ENST00000519474 LENG9Q96B70 501 aa10.62□□□□□ -0.71
HDAC3-215ENST00000519474 ZBTB10Q96DT7 871 aa10.62□□□□□ -0.71
HDAC3-215ENST00000519474 SLC9A7Q96T83 725 aa10.62□□□□□ -0.71
HDAC3-215ENST00000519474 ZNF577Q9BSK1 485 aa10.62□□□□□ -0.71
HDAC3-215ENST00000519474 TBC1D22BQ9NU19 505 aa10.62□□□□□ -0.71
HDAC3-215ENST00000519474 CYP3A7-CYP3A51PA0A087WV96 503 aa10.61□□□□□ -0.71
HDAC3-215ENST00000519474 POTEB3A0JP26 581 aa10.61□□□□□ -0.71
HDAC3-215ENST00000519474 KIF28PB7ZC32 967 aa10.61□□□□□ -0.71
HDAC3-215ENST00000519474 RFXAPO00287 272 aa10.61□□□□□ -0.71
HDAC3-215ENST00000519474 CAND2O75155 1236 aa10.61□□□□□ -0.71
HDAC3-215ENST00000519474 CTSHP09668 335 aa10.61□□□□□ -0.71
HDAC3-215ENST00000519474 CYP3A7P24462 503 aa10.61□□□□□ -0.71
HDAC3-215ENST00000519474 NEK4P51957 841 aa10.61□□□□□ -0.71
HDAC3-215ENST00000519474 IGBP1P78318 339 aa10.61□□□□□ -0.71
HDAC3-215ENST00000519474 TAP1Q03518 808 aa10.61□□□□□ -0.71
HDAC3-215ENST00000519474 MGAT3Q09327 533 aa10.61□□□□□ -0.71
HDAC3-215ENST00000519474 PPFIA1Q13136 1202 aa10.61□□□□□ -0.71
HDAC3-215ENST00000519474 ANKRD1Q15327 319 aa10.61□□□□□ -0.71
HDAC3-215ENST00000519474 ME3Q16798 604 aa10.61□□□□□ -0.71
HDAC3-215ENST00000519474 PRR16Q569H4 304 aa10.61□□□□□ -0.71
HDAC3-215ENST00000519474 POTEBQ6S5H4 581 aa10.61□□□□□ -0.71
HDAC3-215ENST00000519474 NECAB1Q8N987 351 aa10.61□□□□□ -0.71
HDAC3-215ENST00000519474 DAGLBQ8NCG7 672 aa10.61□□□□□ -0.71
HDAC3-215ENST00000519474 MAFAQ8NHW3 353 aaPredicted RBP10.61□□□□□ -0.71
HDAC3-215ENST00000519474 TRAPPC12Q8WVT3 735 aa10.61□□□□□ -0.71
HDAC3-215ENST00000519474 AZI2Q9H6S1 392 aa10.61□□□□□ -0.71
HDAC3-215ENST00000519474 GJB4Q9NTQ9 266 aa10.61□□□□□ -0.71
HDAC3-215ENST00000519474 KCNJ14Q9UNX9 436 aa10.61□□□□□ -0.71
HDAC3-215ENST00000519474 KAT6AQ92794 2004 aa10.61□□□□□ -0.71
HDAC3-215ENST00000519474 MSH4O15457 936 aa10.6□□□□□ -0.71
HDAC3-215ENST00000519474 HBP1O60381 514 aa10.6□□□□□ -0.71
HDAC3-215ENST00000519474 LARGE1O95461 756 aa10.6□□□□□ -0.71
HDAC3-215ENST00000519474 CA3P07451 260 aa10.6□□□□□ -0.71
HDAC3-215ENST00000519474 FOSL2P15408 326 aa10.6□□□□□ -0.71
HDAC3-215ENST00000519474 KLRC1P26715 233 aa10.6□□□□□ -0.71
HDAC3-215ENST00000519474 SLC26A2P50443 739 aa10.6□□□□□ -0.71
HDAC3-215ENST00000519474 GALNT17Q6IS24 598 aa10.6□□□□□ -0.71
HDAC3-215ENST00000519474 ZNF746Q6NUN9 644 aaPredicted RBP10.6□□□□□ -0.71
HDAC3-215ENST00000519474 MIS18BP1Q6P0N0 1132 aa10.6□□□□□ -0.71
HDAC3-215ENST00000519474 TAF2Q6P1X5 1199 aa10.6□□□□□ -0.71
HDAC3-215ENST00000519474 CCDC60Q8IWA6 550 aaPredicted RBP10.6□□□□□ -0.71
HDAC3-215ENST00000519474 FAM177A1Q8N128 213 aaPredicted RBP10.6□□□□□ -0.71
HDAC3-215ENST00000519474 SEPT8Q92599 483 aa10.6□□□□□ -0.71
HDAC3-215ENST00000519474 TNPO1Q92973 898 aaKnown RBP10.6□□□□□ -0.71
HDAC3-215ENST00000519474 GJA10Q969M2 543 aa10.6□□□□□ -0.71
HDAC3-215ENST00000519474 MBOAT7Q96N66 472 aa10.6□□□□□ -0.71
HDAC3-215ENST00000519474 PHF20Q9BVI0 1012 aa10.6□□□□□ -0.71
HDAC3-215ENST00000519474 ZNF302Q9NR11 478 aa10.6□□□□□ -0.71
HDAC3-215ENST00000519474 PCDHA2Q9Y5H9 948 aa10.6□□□□□ -0.71
HDAC3-215ENST00000519474 MAFBQ9Y5Q3 323 aaPredicted RBP10.6□□□□□ -0.71
HDAC3-215ENST00000519474 MYO9BQ13459 2157 aa10.6□□□□□ -0.71
HDAC3-215ENST00000519474 SMIM35A0A1B0GVV1 85 aa10.59□□□□□ -0.71
HDAC3-215ENST00000519474 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.59□□□□□ -0.71
HDAC3-215ENST00000519474 LCHNA4D1U4 455 aa10.59□□□□□ -0.71
HDAC3-215ENST00000519474 EPOPA6NHQ4 379 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms