RNA–Protein interactions for RNA: ENST00000519253.5

PCM1-212, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best) BASIC

Gene PCM1, Length 6,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-212ENST00000519253 GJA10Q969M2 543 aa9.22□□□□□ -0.93
PCM1-212ENST00000519253 SLC24A3Q9HC58 644 aa9.22□□□□□ -0.93
PCM1-212ENST00000519253 POLD4Q9HCU8 107 aa9.22□□□□□ -0.93
PCM1-212ENST00000519253 KBTBD4Q9NVX7 518 aa9.22□□□□□ -0.93
PCM1-212ENST00000519253 ARHGEF35A5YM69 484 aa9.22□□□□□ -0.93
PCM1-212ENST00000519253 TNFRSF8P28908 595 aa9.22□□□□□ -0.93
PCM1-212ENST00000519253 HSD17B3P37058 310 aa9.22□□□□□ -0.93
PCM1-212ENST00000519253 PIGSQ96S52 555 aa9.22□□□□□ -0.93
PCM1-212ENST00000519253 TRIM4Q9C037 500 aa9.22□□□□□ -0.93
PCM1-212ENST00000519253 DCP1AQ9NPI6 582 aaPredicted RBP9.22□□□□□ -0.93
PCM1-212ENST00000519253 PHF20L1A8MW92 1017 aa9.22□□□□□ -0.93
PCM1-212ENST00000519253 HSPA9P38646 679 aaKnown RBP9.22□□□□□ -0.93
PCM1-212ENST00000519253 USP11P51784 963 aa9.22□□□□□ -0.93
PCM1-212ENST00000519253 EIF1ADQ8N9N8 165 aaKnown RBP9.22□□□□□ -0.93
PCM1-212ENST00000519253 MOV10L1Q9BXT6 1211 aaKnown RBP9.22□□□□□ -0.93
PCM1-212ENST00000519253 PCDHA6Q9UN73 950 aa9.22□□□□□ -0.93
PCM1-212ENST00000519253 PCDHA8Q9Y5H6 950 aa9.22□□□□□ -0.93
PCM1-212ENST00000519253 CNTNAP5Q8WYK1 1306 aa9.22□□□□□ -0.93
PCM1-212ENST00000519253 COASYQ13057 564 aa9.22□□□□□ -0.93
PCM1-212ENST00000519253 PDIA5Q14554 519 aa9.22□□□□□ -0.93
PCM1-212ENST00000519253 DDB1Q16531 1140 aa9.22□□□□□ -0.93
PCM1-212ENST00000519253 HLFQ16534 295 aa9.22□□□□□ -0.93
PCM1-212ENST00000519253 PRPF38AQ8NAV1 312 aaKnown RBP9.22□□□□□ -0.93
PCM1-212ENST00000519253 CASKIN2Q8WXE0 1202 aa9.22□□□□□ -0.93
PCM1-212ENST00000519253 LMNAP02545 664 aaKnown RBP9.22□□□□□ -0.93
PCM1-212ENST00000519253 PLS1Q14651 629 aa9.22□□□□□ -0.93
PCM1-212ENST00000519253 MESDQ14696 234 aa9.22□□□□□ -0.93
PCM1-212ENST00000519253 CDCA7Q9BWT1 371 aaPredicted RBP9.22□□□□□ -0.93
PCM1-212ENST00000519253 AZI2Q9H6S1 392 aa9.22□□□□□ -0.93
PCM1-212ENST00000519253 VPS37BQ9H9H4 285 aa9.22□□□□□ -0.93
PCM1-212ENST00000519253 SCOCQ9UIL1 159 aa9.22□□□□□ -0.93
PCM1-212ENST00000519253 EXOC7Q9UPT5 735 aa9.22□□□□□ -0.93
PCM1-212ENST00000519253 SHOX2O60902 331 aaPredicted RBP9.21□□□□□ -0.93
PCM1-212ENST00000519253 CCND1P24385 295 aa9.21□□□□□ -0.93
PCM1-212ENST00000519253 KLRC1P26715 233 aa9.21□□□□□ -0.93
PCM1-212ENST00000519253 NAALADL2Q58DX5 795 aa9.21□□□□□ -0.93
PCM1-212ENST00000519253 SYNE4Q8N205 404 aa9.21□□□□□ -0.93
PCM1-212ENST00000519253 GRAMD1AQ96CP6 724 aa9.21□□□□□ -0.93
PCM1-212ENST00000519253 TSC22D3Q99576 134 aa9.21□□□□□ -0.93
PCM1-212ENST00000519253 ATXN2Q99700 1313 aaKnown RBP9.21□□□□□ -0.93
PCM1-212ENST00000519253 A0A0U1RQJ8 604 aa9.21□□□□□ -0.93
PCM1-212ENST00000519253 KIF3CO14782 793 aa9.21□□□□□ -0.93
PCM1-212ENST00000519253 PRPF6O94906 941 aaKnown RBP9.21□□□□□ -0.93
PCM1-212ENST00000519253 GSTA1P08263 222 aa9.21□□□□□ -0.93
PCM1-212ENST00000519253 TMOD1P28289 359 aa9.21□□□□□ -0.93
PCM1-212ENST00000519253 KLK7P49862 253 aa9.21□□□□□ -0.93
PCM1-212ENST00000519253 CYP2J2P51589 502 aa9.21□□□□□ -0.93
PCM1-212ENST00000519253 GPATCH4Q5T3I0 446 aaKnown RBP9.21□□□□□ -0.93
PCM1-212ENST00000519253 THOC1Q96FV9 657 aaKnown RBP9.21□□□□□ -0.93
PCM1-212ENST00000519253 BICD1Q96G01 975 aa9.21□□□□□ -0.93
PCM1-212ENST00000519253 IWS1Q96ST2 819 aa9.21□□□□□ -0.93
PCM1-212ENST00000519253 SH3GL3Q99963 347 aa9.21□□□□□ -0.93
PCM1-212ENST00000519253 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.21□□□□□ -0.932e-6■■■■■ 42.1
PCM1-212ENST00000519253 MAPK13O15264 365 aa9.21□□□□□ -0.94
PCM1-212ENST00000519253 FOSP01100 380 aaPredicted RBP9.21□□□□□ -0.94
PCM1-212ENST00000519253 EIF6P56537 245 aaKnown RBP9.21□□□□□ -0.94
PCM1-212ENST00000519253 SATB1Q01826 763 aa9.21□□□□□ -0.94
PCM1-212ENST00000519253 LMNB2Q03252 620 aa9.21□□□□□ -0.94
PCM1-212ENST00000519253 CD302Q8IX05 232 aa9.21□□□□□ -0.94
PCM1-212ENST00000519253 TBC1D22AQ8WUA7 517 aa9.21□□□□□ -0.94
PCM1-212ENST00000519253 RFFLQ8WZ73 363 aa9.21□□□□□ -0.94
PCM1-212ENST00000519253 IMPG2Q9BZV3 1241 aa9.21□□□□□ -0.94
PCM1-212ENST00000519253 ARHGAP20Q9P2F6 1191 aa9.21□□□□□ -0.94
PCM1-212ENST00000519253 DCTN3O75935 186 aa9.21□□□□□ -0.94
PCM1-212ENST00000519253 PLEKP08567 350 aaPredicted RBP9.21□□□□□ -0.94
PCM1-212ENST00000519253 GHRP10912 638 aa9.21□□□□□ -0.94
PCM1-212ENST00000519253 MECOMQ03112 1051 aa9.21□□□□□ -0.94
PCM1-212ENST00000519253 TRPM8Q7Z2W7 1104 aa9.21□□□□□ -0.94
PCM1-212ENST00000519253 SPATA24Q86W54 205 aa9.21□□□□□ -0.94
PCM1-212ENST00000519253 FAM178BQ8IXR5 827 aa9.21□□□□□ -0.94
PCM1-212ENST00000519253 PITPNM3Q9BZ71 974 aa9.21□□□□□ -0.94
PCM1-212ENST00000519253 NOD2Q9HC29 1040 aa9.21□□□□□ -0.94
PCM1-212ENST00000519253 ADAMTS2O95450 1211 aa9.21□□□□□ -0.94
PCM1-212ENST00000519253 KRT5P13647 590 aa9.21□□□□□ -0.94
PCM1-212ENST00000519253 OR2W6PQ8NHA6 318 aa9.21□□□□□ -0.94
PCM1-212ENST00000519253 EHD2Q9NZN4 543 aa9.21□□□□□ -0.94
PCM1-212ENST00000519253 PTPN22Q9Y2R2 807 aa9.21□□□□□ -0.94
PCM1-212ENST00000519253 A0A087X0B3 334 aa9.2□□□□□ -0.94
PCM1-212ENST00000519253 STAMBPO95630 424 aa9.2□□□□□ -0.94
PCM1-212ENST00000519253 GLI1P08151 1106 aa9.2□□□□□ -0.94
PCM1-212ENST00000519253 USP17L8P0C7I0 530 aa9.2□□□□□ -0.94
PCM1-212ENST00000519253 CHN1P15882 459 aa9.2□□□□□ -0.94
PCM1-212ENST00000519253 SCTRP47872 440 aa9.2□□□□□ -0.94
PCM1-212ENST00000519253 PABPC4Q13310 644 aaKnown RBP eCLIP9.2□□□□□ -0.94
PCM1-212ENST00000519253 SGO2Q562F6 1265 aa9.2□□□□□ -0.94
PCM1-212ENST00000519253 PRR16Q569H4 304 aa9.2□□□□□ -0.94
PCM1-212ENST00000519253 WDR44Q5JSH3 913 aa9.2□□□□□ -0.94
PCM1-212ENST00000519253 TMC4Q7Z404 712 aa9.2□□□□□ -0.94
PCM1-212ENST00000519253 MREGQ8N565 214 aa9.2□□□□□ -0.94
PCM1-212ENST00000519253 HDAC7Q8WUI4 952 aa9.2□□□□□ -0.94
PCM1-212ENST00000519253 KDM4CQ9H3R0 1056 aa9.2□□□□□ -0.94
PCM1-212ENST00000519253 ARL2BPQ9Y2Y0 163 aa9.2□□□□□ -0.94
PCM1-212ENST00000519253 DIP2AQ14689 1571 aa9.2□□□□□ -0.94
PCM1-212ENST00000519253 DIP2BQ9P265 1576 aa9.2□□□□□ -0.94
PCM1-212ENST00000519253 PDE2AO00408 941 aaPredicted RBP9.2□□□□□ -0.94
PCM1-212ENST00000519253 NMT2O60551 498 aa9.2□□□□□ -0.94
PCM1-212ENST00000519253 MYL7Q01449 175 aa9.2□□□□□ -0.94
PCM1-212ENST00000519253 NR1H3Q13133 447 aa9.2□□□□□ -0.94
PCM1-212ENST00000519253 VCX3BQ9H321 246 aa9.2□□□□□ -0.94
PCM1-212ENST00000519253 ECT2Q9H8V3 914 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms