RNA–Protein interactions for RNA: ENST00000519141.5

SPIDR-209, Transcript of scaffold protein involved in DNA repair, human

TSL 2

Gene SPIDR, Length 1,699 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-209	ENST00000519141	PPP1R2	P41236	205 aa		13.79	□□□□□ -0.2
SPIDR-209	ENST00000519141	PAK1	Q13153	545 aa		13.79	□□□□□ -0.2
SPIDR-209	ENST00000519141	ZNF746	Q6NUN9	644 aa	Predicted RBP	13.79	□□□□□ -0.2
SPIDR-209	ENST00000519141	BANK1	Q8NDB2	785 aa		13.79	□□□□□ -0.2
SPIDR-209	ENST00000519141	RDM1	Q8NG50	284 aa		13.79	□□□□□ -0.2
SPIDR-209	ENST00000519141	DNAJC19	Q96DA6	116 aa		13.79	□□□□□ -0.2
SPIDR-209	ENST00000519141	NACC1	Q96RE7	527 aa		13.79	□□□□□ -0.2
SPIDR-209	ENST00000519141	BHMT2	Q9H2M3	363 aa		13.79	□□□□□ -0.2
SPIDR-209	ENST00000519141	NFE2L3	Q9Y4A8	694 aa		13.79	□□□□□ -0.2
SPIDR-209	ENST00000519141	PSMA7	O14818	248 aa		13.79	□□□□□ -0.2
SPIDR-209	ENST00000519141	P4HB	P07237	508 aa	Known RBP	13.79	□□□□□ -0.2
SPIDR-209	ENST00000519141	ICAM3	P32942	547 aa		13.79	□□□□□ -0.2
SPIDR-209	ENST00000519141	PRCP	P42785	496 aa		13.79	□□□□□ -0.2
SPIDR-209	ENST00000519141	ZNF75D	P51815	510 aa		13.79	□□□□□ -0.2
SPIDR-209	ENST00000519141	CCDC65	Q8IXS2	484 aa		13.79	□□□□□ -0.2
SPIDR-209	ENST00000519141	REM2	Q8IYK8	340 aa	Predicted RBP	13.79	□□□□□ -0.2
SPIDR-209	ENST00000519141	ADSSL1	Q8N142	457 aa		13.79	□□□□□ -0.2
SPIDR-209	ENST00000519141	ZSWIM4	Q9H7M6	989 aa		13.79	□□□□□ -0.2
SPIDR-209	ENST00000519141	JPH1	Q9HDC5	661 aa	Predicted RBP	13.79	□□□□□ -0.2
SPIDR-209	ENST00000519141	ZCCHC17	Q9NP64	241 aa	Known RBP	13.79	□□□□□ -0.2
SPIDR-209	ENST00000519141	PANK4	Q9NVE7	773 aa		13.79	□□□□□ -0.2
SPIDR-209	ENST00000519141	FANCL	Q9NW38	375 aa		13.79	□□□□□ -0.2
SPIDR-209	ENST00000519141	RWDD2A	Q9UIY3	292 aa		13.79	□□□□□ -0.2
SPIDR-209	ENST00000519141	IVNS1ABP	Q9Y6Y0	642 aa		13.79	□□□□□ -0.2
SPIDR-209	ENST00000519141	MCM3AP	O60318	1980 aa		13.78	□□□□□ -0.2
SPIDR-209	ENST00000519141	LOC102724159	A0A0B4J2E5	919 aa		13.78	□□□□□ -0.2
SPIDR-209	ENST00000519141	CCNE2	O96020	404 aa		13.78	□□□□□ -0.2
SPIDR-209	ENST00000519141	QARS	P47897	775 aa	Known RBP	13.78	□□□□□ -0.2
SPIDR-209	ENST00000519141	STX17	P56962	302 aa		13.78	□□□□□ -0.2
SPIDR-209	ENST00000519141	COASY	Q13057	564 aa		13.78	□□□□□ -0.2
SPIDR-209	ENST00000519141	PSMD2	Q13200	908 aa		13.78	□□□□□ -0.2
SPIDR-209	ENST00000519141	PWP2	Q15269	919 aa	Known RBP	13.78	□□□□□ -0.2
SPIDR-209	ENST00000519141	FAM110C	Q1W6H9	321 aa		13.78	□□□□□ -0.2
SPIDR-209	ENST00000519141	SPATA1	Q5VX52	437 aa		13.78	□□□□□ -0.2
SPIDR-209	ENST00000519141	SEPT14	Q6ZU15	432 aa		13.78	□□□□□ -0.2
SPIDR-209	ENST00000519141	SMAP1	Q8IYB5	467 aa	Predicted RBP	13.78	□□□□□ -0.2
SPIDR-209	ENST00000519141	PIGO	Q8TEQ8	1089 aa		13.78	□□□□□ -0.2
SPIDR-209	ENST00000519141	NELFB	Q8WX92	580 aa		13.78	□□□□□ -0.2
SPIDR-209	ENST00000519141	SENP7	Q9BQF6	1050 aa		13.78	□□□□□ -0.2
SPIDR-209	ENST00000519141	RNF186	Q9NXI6	227 aa		13.78	□□□□□ -0.2
SPIDR-209	ENST00000519141	SAGE1	Q9NXZ1	904 aa		13.78	□□□□□ -0.2
SPIDR-209	ENST00000519141	MAPK8IP1	Q9UQF2	711 aa		13.78	□□□□□ -0.2
SPIDR-209	ENST00000519141	TRPA1	O75762	1119 aa		13.77	□□□□□ -0.21
SPIDR-209	ENST00000519141	EHHADH	Q08426	723 aa		13.77	□□□□□ -0.21
SPIDR-209	ENST00000519141	STK4	Q13043	487 aa		13.77	□□□□□ -0.21
SPIDR-209	ENST00000519141	TPD52L1	Q16890	204 aa	Predicted RBP	13.77	□□□□□ -0.21
SPIDR-209	ENST00000519141	COBLL1	Q53SF7	1204 aa		13.77	□□□□□ -0.21
SPIDR-209	ENST00000519141	ARSH	Q5FYA8	562 aa		13.77	□□□□□ -0.21
SPIDR-209	ENST00000519141	ABRA	Q8N0Z2	381 aa		13.77	□□□□□ -0.21
SPIDR-209	ENST00000519141	TRIM44	Q96DX7	344 aa	Predicted RBP	13.77	□□□□□ -0.21
SPIDR-209	ENST00000519141	DHTKD1	Q96HY7	919 aa	Predicted RBP	13.77	□□□□□ -0.21
SPIDR-209	ENST00000519141	FGD4	Q96M96	766 aa		13.77	□□□□□ -0.21
SPIDR-209	ENST00000519141	MED15	Q96RN5	788 aa		13.77	□□□□□ -0.21
SPIDR-209	ENST00000519141	HSD3B7	Q9H2F3	369 aa		13.77	□□□□□ -0.21
SPIDR-209	ENST00000519141	WRAP73	Q9P2S5	460 aa	Predicted RBP	13.77	□□□□□ -0.21
SPIDR-209	ENST00000519141	SLC9A2	Q9UBY0	812 aa		13.77	□□□□□ -0.21
SPIDR-209	ENST00000519141	NPHP3-ACAD11	A0A0J9YXS1	232 aa		13.76	□□□□□ -0.21
SPIDR-209	ENST00000519141	IGF2BP3	O00425	579 aa	Known RBP eCLIP	13.76	□□□□□ -0.21
SPIDR-209	ENST00000519141	STRN	O43815	780 aa		13.76	□□□□□ -0.21
SPIDR-209	ENST00000519141	TBCA	O75347	108 aa	Known RBP	13.76	□□□□□ -0.21
SPIDR-209	ENST00000519141	LYPLA2	O95372	231 aa		13.76	□□□□□ -0.21
SPIDR-209	ENST00000519141	PTMA	P06454	111 aa	Known RBP	13.76	□□□□□ -0.21
SPIDR-209	ENST00000519141	RAD51AP2	Q09MP3	1159 aa		13.76	□□□□□ -0.21
SPIDR-209	ENST00000519141	FAM26F	Q5R3K3	315 aa		13.76	□□□□□ -0.21
SPIDR-209	ENST00000519141	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	13.76	□□□□□ -0.21
SPIDR-209	ENST00000519141	KIAA0895	Q8NCT3	520 aa		13.76	□□□□□ -0.21
SPIDR-209	ENST00000519141	MRFAP1L1	Q96HT8	127 aa		13.76	□□□□□ -0.21
SPIDR-209	ENST00000519141	REEP2	Q9BRK0	252 aa		13.76	□□□□□ -0.21
SPIDR-209	ENST00000519141	RUSC1	Q9BVN2	902 aa		13.76	□□□□□ -0.21
SPIDR-209	ENST00000519141	SLC39A2	Q9NP94	309 aa		13.76	□□□□□ -0.21
SPIDR-209	ENST00000519141	KCND2	Q9NZV8	630 aa		13.76	□□□□□ -0.21
SPIDR-209	ENST00000519141	PCDHA10	Q9Y5I2	948 aa		13.76	□□□□□ -0.21
SPIDR-209	ENST00000519141	ZNF236	Q9UL36	1845 aa		13.76	□□□□□ -0.21
SPIDR-209	ENST00000519141	HTT	P42858	3142 aa		13.76	□□□□□ -0.21
SPIDR-209	ENST00000519141	FRMD3	A2A2Y4	597 aa		13.75	□□□□□ -0.21
SPIDR-209	ENST00000519141	ARHGEF35	A5YM69	484 aa		13.75	□□□□□ -0.21
SPIDR-209	ENST00000519141	ASB14	A6NK59	587 aa		13.75	□□□□□ -0.21
SPIDR-209	ENST00000519141	PSAP	P07602	524 aa		13.75	□□□□□ -0.21
SPIDR-209	ENST00000519141	ATP1A3	P13637	1013 aa		13.75	□□□□□ -0.21
SPIDR-209	ENST00000519141	ADORA2A	P29274	412 aa		13.75	□□□□□ -0.21
SPIDR-209	ENST00000519141	CDC25B	P30305	580 aa		13.75	□□□□□ -0.21
SPIDR-209	ENST00000519141	MAPK4	P31152	587 aa		13.75	□□□□□ -0.21
SPIDR-209	ENST00000519141	TM4SF4	P48230	202 aa		13.75	□□□□□ -0.21
SPIDR-209	ENST00000519141	INHBE	P58166	350 aa		13.75	□□□□□ -0.21
SPIDR-209	ENST00000519141	PSMC5	P62195	406 aa		13.75	□□□□□ -0.21
SPIDR-209	ENST00000519141	FANCC	Q00597	558 aa		13.75	□□□□□ -0.21
SPIDR-209	ENST00000519141	CACNB1	Q02641	598 aa	Predicted RBP	13.75	□□□□□ -0.21
SPIDR-209	ENST00000519141	GIT2	Q14161	759 aa		13.75	□□□□□ -0.21
SPIDR-209	ENST00000519141	TAF1C	Q15572	869 aa	Predicted RBP	13.75	□□□□□ -0.21
SPIDR-209	ENST00000519141	HPS3	Q969F9	1004 aa		13.75	□□□□□ -0.21
SPIDR-209	ENST00000519141	CCDC43	Q96MW1	224 aa	Known RBP	13.75	□□□□□ -0.21
SPIDR-209	ENST00000519141	ZHX3	Q9H4I2	956 aa		13.75	□□□□□ -0.21
SPIDR-209	ENST00000519141	DBR1	Q9UK59	544 aa	Known RBP	13.75	□□□□□ -0.21
SPIDR-209	ENST00000519141	MYH9	P35579	1960 aa	Known RBP	13.75	□□□□□ -0.21
SPIDR-209	ENST00000519141	MYH11	P35749	1972 aa		13.75	□□□□□ -0.21
SPIDR-209	ENST00000519141	ADGRA2	Q96PE1	1338 aa		13.75	□□□□□ -0.21
SPIDR-209	ENST00000519141	BICDL2	A1A5D9	508 aa		13.75	□□□□□ -0.21
SPIDR-209	ENST00000519141	DKC1	O60832	514 aa	Known RBP eCLIP	13.75	□□□□□ -0.21
SPIDR-209	ENST00000519141	SERPINC1	P01008	464 aa		13.75	□□□□□ -0.21
SPIDR-209	ENST00000519141	TGFB3	P10600	412 aa		13.75	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms