RNA–Protein interactions for RNA: ENST00000518825.5

CTNNA1-210, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 3,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-210ENST00000518825 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.31□□□□□ -0.92
CTNNA1-210ENST00000518825 MYBP10242 640 aa9.31□□□□□ -0.92
CTNNA1-210ENST00000518825 DNA2P51530 1060 aa9.31□□□□□ -0.92
CTNNA1-210ENST00000518825 PTK2Q05397 1052 aa9.31□□□□□ -0.92
CTNNA1-210ENST00000518825 ENOX2Q16206 610 aaKnown RBP9.31□□□□□ -0.92
CTNNA1-210ENST00000518825 CDC37Q16543 378 aaPredicted RBP9.31□□□□□ -0.92
CTNNA1-210ENST00000518825 LEKR1Q6ZMV7 388 aa9.31□□□□□ -0.92
CTNNA1-210ENST00000518825 GDF3Q9NR23 364 aa9.31□□□□□ -0.92
CTNNA1-210ENST00000518825 ZNF646O15015 1829 aaPredicted RBP9.31□□□□□ -0.92
CTNNA1-210ENST00000518825 TNFRSF8P28908 595 aa9.31□□□□□ -0.92
CTNNA1-210ENST00000518825 USP11P51784 963 aa9.31□□□□□ -0.92
CTNNA1-210ENST00000518825 TCP10Q12799 353 aa9.31□□□□□ -0.92
CTNNA1-210ENST00000518825 CAVIN3Q969G5 261 aa9.31□□□□□ -0.92
CTNNA1-210ENST00000518825 MKL1Q969V6 931 aa9.31□□□□□ -0.92
CTNNA1-210ENST00000518825 REEP2Q9BRK0 252 aa9.31□□□□□ -0.92
CTNNA1-210ENST00000518825 ACBD3Q9H3P7 528 aa9.31□□□□□ -0.92
CTNNA1-210ENST00000518825 SIX2Q9NPC8 291 aa9.31□□□□□ -0.92
CTNNA1-210ENST00000518825 FAM198AQ9UFP1 575 aa9.31□□□□□ -0.92
CTNNA1-210ENST00000518825 NENFQ9UMX5 172 aa9.31□□□□□ -0.92
CTNNA1-210ENST00000518825 SUGT1Q9Y2Z0 365 aa9.31□□□□□ -0.92
CTNNA1-210ENST00000518825 KDM3AQ9Y4C1 1321 aa9.3□□□□□ -0.92
CTNNA1-210ENST00000518825 VGLL3A8MV65 326 aa9.3□□□□□ -0.92
CTNNA1-210ENST00000518825 AKAP3O75969 853 aa9.3□□□□□ -0.92
CTNNA1-210ENST00000518825 CASP4P49662 377 aa9.3□□□□□ -0.92
CTNNA1-210ENST00000518825 RAPGEF1Q13905 1077 aa9.3□□□□□ -0.92
CTNNA1-210ENST00000518825 RRP1BQ14684 758 aaKnown RBP9.3□□□□□ -0.92
CTNNA1-210ENST00000518825 IQCEQ6IPM2 695 aa9.3□□□□□ -0.92
CTNNA1-210ENST00000518825 GJD4Q96KN9 370 aaPredicted RBP9.3□□□□□ -0.92
CTNNA1-210ENST00000518825 TRAF3IP3Q9Y228 551 aa9.3□□□□□ -0.92
CTNNA1-210ENST00000518825 NR2F2P24468 414 aa9.3□□□□□ -0.92
CTNNA1-210ENST00000518825 RNASE9P60153 205 aaKnown RBP9.3□□□□□ -0.92
CTNNA1-210ENST00000518825 ARHGAP4P98171 946 aa9.3□□□□□ -0.92
CTNNA1-210ENST00000518825 PABPC4Q13310 644 aaKnown RBP eCLIP9.3□□□□□ -0.922e-8■■□□□ 13.2
CTNNA1-210ENST00000518825 KIAA0753Q2KHM9 967 aa9.3□□□□□ -0.92
CTNNA1-210ENST00000518825 EDRF1Q3B7T1 1238 aa9.3□□□□□ -0.92
CTNNA1-210ENST00000518825 PRR16Q569H4 304 aa9.3□□□□□ -0.92
CTNNA1-210ENST00000518825 HHIPL2Q6UWX4 724 aa9.3□□□□□ -0.92
CTNNA1-210ENST00000518825 CCDC65Q8IXS2 484 aa9.3□□□□□ -0.92
CTNNA1-210ENST00000518825 C10orf67Q8IYJ2 551 aa9.3□□□□□ -0.92
CTNNA1-210ENST00000518825 TMEM59LQ9UK28 342 aa9.3□□□□□ -0.92
CTNNA1-210ENST00000518825 SCN9AQ15858 1988 aa9.3□□□□□ -0.92
CTNNA1-210ENST00000518825 ASTN1O14525 1302 aa9.3□□□□□ -0.92
CTNNA1-210ENST00000518825 PITPNM2Q9BZ72 1349 aa9.3□□□□□ -0.92
CTNNA1-210ENST00000518825 EML1O00423 815 aa9.3□□□□□ -0.92
CTNNA1-210ENST00000518825 RAD21O60216 631 aa9.3□□□□□ -0.92
CTNNA1-210ENST00000518825 ONECUT3O60422 494 aaPredicted RBP9.3□□□□□ -0.92
CTNNA1-210ENST00000518825 PON1P27169 355 aa9.3□□□□□ -0.92
CTNNA1-210ENST00000518825 HOXA7P31268 230 aaPredicted RBP9.3□□□□□ -0.92
CTNNA1-210ENST00000518825 IRAK1P51617 712 aa9.3□□□□□ -0.92
CTNNA1-210ENST00000518825 SFR1Q86XK3 245 aa9.3□□□□□ -0.92
CTNNA1-210ENST00000518825 RUBCNQ92622 972 aa9.3□□□□□ -0.92
CTNNA1-210ENST00000518825 ZIM3Q96PE6 472 aa9.3□□□□□ -0.92
CTNNA1-210ENST00000518825 RUSC1Q9BVN2 902 aa9.3□□□□□ -0.92
CTNNA1-210ENST00000518825 TRIM34Q9BYJ4 488 aa9.3□□□□□ -0.92
CTNNA1-210ENST00000518825 HDAC9Q9UKV0 1011 aa9.3□□□□□ -0.92
CTNNA1-210ENST00000518825 VAV3Q9UKW4 847 aa9.3□□□□□ -0.92
CTNNA1-210ENST00000518825 NFU1Q9UMS0 254 aa9.3□□□□□ -0.92
CTNNA1-210ENST00000518825 COL11A2P13942 1736 aaPredicted RBP9.3□□□□□ -0.92
CTNNA1-210ENST00000518825 ZNF233A6NK53 670 aa9.29□□□□□ -0.92
CTNNA1-210ENST00000518825 MARCH6O60337 910 aa9.29□□□□□ -0.92
CTNNA1-210ENST00000518825 KRT14P02533 472 aa9.29□□□□□ -0.92
CTNNA1-210ENST00000518825 UCHL3P15374 230 aa9.29□□□□□ -0.92
CTNNA1-210ENST00000518825 ECHS1P30084 290 aa9.29□□□□□ -0.92
CTNNA1-210ENST00000518825 CRKP46108 304 aa9.29□□□□□ -0.92
CTNNA1-210ENST00000518825 EPHB4P54760 987 aa9.29□□□□□ -0.92
CTNNA1-210ENST00000518825 CCDC181Q5TID7 509 aa9.29□□□□□ -0.92
CTNNA1-210ENST00000518825 C8orf74Q6P047 294 aa9.29□□□□□ -0.92
CTNNA1-210ENST00000518825 GJB7Q6PEY0 223 aa9.29□□□□□ -0.92
CTNNA1-210ENST00000518825 IQCKQ8N0W5 287 aa9.29□□□□□ -0.92
CTNNA1-210ENST00000518825 SYT2Q8N9I0 419 aaPredicted RBP9.29□□□□□ -0.92
CTNNA1-210ENST00000518825 LRRC57Q8N9N7 239 aa9.29□□□□□ -0.92
CTNNA1-210ENST00000518825 PROCA1Q8NCQ7 364 aaPredicted RBP9.29□□□□□ -0.92
CTNNA1-210ENST00000518825 CASKIN2Q8WXE0 1202 aa9.29□□□□□ -0.92
CTNNA1-210ENST00000518825 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.29□□□□□ -0.92
CTNNA1-210ENST00000518825 RSPH14Q9UHP6 348 aa9.29□□□□□ -0.92
CTNNA1-210ENST00000518825 GOLGA6CA6NDK9 693 aa9.29□□□□□ -0.92
CTNNA1-210ENST00000518825 ZBTB39O15060 712 aa9.29□□□□□ -0.92
CTNNA1-210ENST00000518825 MSH4O15457 936 aa9.29□□□□□ -0.92
CTNNA1-210ENST00000518825 TOM1O60784 492 aa9.29□□□□□ -0.92
CTNNA1-210ENST00000518825 GNA14O95837 355 aa9.29□□□□□ -0.92
CTNNA1-210ENST00000518825 IVLP07476 585 aa9.29□□□□□ -0.92
CTNNA1-210ENST00000518825 GOLGA6DP0CG33 693 aa9.29□□□□□ -0.92
CTNNA1-210ENST00000518825 RPA1P27694 616 aa9.29□□□□□ -0.92
CTNNA1-210ENST00000518825 NAP1L1P55209 391 aaKnown RBP9.29□□□□□ -0.92
CTNNA1-210ENST00000518825 KLHL30Q0D2K2 578 aa9.29□□□□□ -0.92
CTNNA1-210ENST00000518825 EPHA7Q15375 998 aa9.29□□□□□ -0.92
CTNNA1-210ENST00000518825 PTPROQ16827 1216 aa9.29□□□□□ -0.92
CTNNA1-210ENST00000518825 Q4G0T1 1027 aa9.29□□□□□ -0.92
CTNNA1-210ENST00000518825 CFAP221Q4G0U5 840 aa9.29□□□□□ -0.92
CTNNA1-210ENST00000518825 SLFN13Q68D06 897 aa9.29□□□□□ -0.92
CTNNA1-210ENST00000518825 TTC19Q6DKK2 380 aaPredicted RBP9.29□□□□□ -0.92
CTNNA1-210ENST00000518825 BORCS6Q96GS4 357 aa9.29□□□□□ -0.92
CTNNA1-210ENST00000518825 ZC3H12CQ9C0D7 883 aaKnown RBP9.29□□□□□ -0.92
CTNNA1-210ENST00000518825 NUCKS1Q9H1E3 243 aaKnown RBP9.29□□□□□ -0.92
CTNNA1-210ENST00000518825 ZHX3Q9H4I2 956 aa9.29□□□□□ -0.92
CTNNA1-210ENST00000518825 EPB41L5Q9HCM4 733 aa9.29□□□□□ -0.92
CTNNA1-210ENST00000518825 GOLGA6AQ9NYA3 693 aa9.29□□□□□ -0.92
CTNNA1-210ENST00000518825 ZMYM2Q9UBW7 1377 aa9.29□□□□□ -0.92
CTNNA1-210ENST00000518825 KIF13BQ9NQT8 1826 aa9.29□□□□□ -0.92
CTNNA1-210ENST00000518825 EPB41P11171 864 aaKnown RBP9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms