RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 OCRLQ01968 901 aa5.22□□□□□ -1.57
VPS13B-207ENST00000518569 SART3Q15020 963 aaKnown RBP5.22□□□□□ -1.57
VPS13B-207ENST00000518569 ZNF174Q15697 407 aa5.22□□□□□ -1.57
VPS13B-207ENST00000518569 CPZQ66K79 652 aa5.22□□□□□ -1.57
VPS13B-207ENST00000518569 CREB3L3Q68CJ9 461 aa5.22□□□□□ -1.57
VPS13B-207ENST00000518569 TMEFF1Q8IYR6 380 aa5.22□□□□□ -1.57
VPS13B-207ENST00000518569 NXPE1Q8N323 547 aa5.22□□□□□ -1.57
VPS13B-207ENST00000518569 EFHBQ8N7U6 833 aa5.22□□□□□ -1.57
VPS13B-207ENST00000518569 SMC1BQ8NDV3 1235 aa5.22□□□□□ -1.57
VPS13B-207ENST00000518569 SMARCC2Q8TAQ2 1214 aa5.22□□□□□ -1.57
VPS13B-207ENST00000518569 ZCRB1Q8TBF4 217 aaKnown RBP5.22□□□□□ -1.57
VPS13B-207ENST00000518569 TMEM209Q96SK2 561 aa5.22□□□□□ -1.57
VPS13B-207ENST00000518569 CD320Q9NPF0 282 aa5.22□□□□□ -1.57
VPS13B-207ENST00000518569 ZNF891A8MT65 544 aaPredicted RBP5.21□□□□□ -1.58
VPS13B-207ENST00000518569 CYP17A1P05093 508 aa5.21□□□□□ -1.58
VPS13B-207ENST00000518569 ENO2P09104 434 aaPredicted RBP5.21□□□□□ -1.58
VPS13B-207ENST00000518569 NCLP19338 710 aaKnown RBP5.21□□□□□ -1.58
VPS13B-207ENST00000518569 CNGA1P29973 690 aa5.21□□□□□ -1.58
VPS13B-207ENST00000518569 LSSP48449 732 aa5.21□□□□□ -1.58
VPS13B-207ENST00000518569 FNTBP49356 437 aa5.21□□□□□ -1.58
VPS13B-207ENST00000518569 DBPQ10586 325 aaPredicted RBP5.21□□□□□ -1.58
VPS13B-207ENST00000518569 SEC23AQ15436 765 aa5.21□□□□□ -1.58
VPS13B-207ENST00000518569 CT47A1Q5JQC4 288 aaPredicted RBP5.21□□□□□ -1.58
VPS13B-207ENST00000518569 LCE4AQ5TA78 99 aa5.21□□□□□ -1.58
VPS13B-207ENST00000518569 ATG14Q6ZNE5 492 aa5.21□□□□□ -1.58
VPS13B-207ENST00000518569 PROSER1Q86XN7 944 aa5.21□□□□□ -1.58
VPS13B-207ENST00000518569 LRRC56Q8IYG6 542 aaPredicted RBP5.21□□□□□ -1.58
VPS13B-207ENST00000518569 FAM26EQ8N5C1 309 aa5.21□□□□□ -1.58
VPS13B-207ENST00000518569 LINC00482Q8N8I6 264 aa5.21□□□□□ -1.58
VPS13B-207ENST00000518569 IFT22Q9H7X7 185 aa5.21□□□□□ -1.58
VPS13B-207ENST00000518569 OXSMQ9NWU1 459 aa5.21□□□□□ -1.58
VPS13B-207ENST00000518569 SMG5Q9UPR3 1016 aaKnown RBP5.21□□□□□ -1.58
VPS13B-207ENST00000518569 ASB1Q9Y576 335 aa5.21□□□□□ -1.58
VPS13B-207ENST00000518569 SPO11Q9Y5K1 396 aa5.21□□□□□ -1.58
VPS13B-207ENST00000518569 RFXAPO00287 272 aa5.2□□□□□ -1.58
VPS13B-207ENST00000518569 DVL2O14641 736 aa5.2□□□□□ -1.58
VPS13B-207ENST00000518569 FOXP2O15409 715 aa5.2□□□□□ -1.58
VPS13B-207ENST00000518569 BRINP1O60477 761 aa5.2□□□□□ -1.58
VPS13B-207ENST00000518569 EYA4O95677 639 aa5.2□□□□□ -1.58
VPS13B-207ENST00000518569 C1QTNF9P0C862 333 aa5.2□□□□□ -1.58
VPS13B-207ENST00000518569 AOAHP28039 575 aa5.2□□□□□ -1.58
VPS13B-207ENST00000518569 KPNA1P52294 538 aaPredicted RBP5.2□□□□□ -1.58
VPS13B-207ENST00000518569 HTRA3P83110 453 aa5.2□□□□□ -1.58
VPS13B-207ENST00000518569 NFKB2Q00653 900 aa5.2□□□□□ -1.58
VPS13B-207ENST00000518569 KRTAP19-4Q3LI73 84 aa5.2□□□□□ -1.58
VPS13B-207ENST00000518569 ZNF385BQ569K4 471 aa5.2□□□□□ -1.58
VPS13B-207ENST00000518569 CD276Q5ZPR3 534 aa5.2□□□□□ -1.58
VPS13B-207ENST00000518569 VASNQ6EMK4 673 aa5.2□□□□□ -1.58
VPS13B-207ENST00000518569 FSTL4Q6MZW2 842 aa5.2□□□□□ -1.58
VPS13B-207ENST00000518569 FAM129CQ86XR2 697 aa5.2□□□□□ -1.58
VPS13B-207ENST00000518569 PASD1Q8IV76 773 aa5.2□□□□□ -1.58
VPS13B-207ENST00000518569 UBR7Q8N806 425 aa5.2□□□□□ -1.58
VPS13B-207ENST00000518569 TTLL6Q8N841 843 aa5.2□□□□□ -1.58
VPS13B-207ENST00000518569 KIAA1958Q8N8K9 716 aa5.2□□□□□ -1.58
VPS13B-207ENST00000518569 KYQ8NBH2 561 aa5.2□□□□□ -1.58
VPS13B-207ENST00000518569 USP7Q93009 1102 aa5.2□□□□□ -1.58
VPS13B-207ENST00000518569 WRNIP1Q96S55 665 aa5.2□□□□□ -1.58
VPS13B-207ENST00000518569 TTC1Q99614 292 aa5.2□□□□□ -1.58
VPS13B-207ENST00000518569 C11orf84Q9BUA3 381 aaPredicted RBP5.2□□□□□ -1.58
VPS13B-207ENST00000518569 DLL4Q9NR61 685 aa5.2□□□□□ -1.58
VPS13B-207ENST00000518569 CNOT6Q9ULM6 557 aaKnown RBP5.2□□□□□ -1.58
VPS13B-207ENST00000518569 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.19□□□□□ -1.58
VPS13B-207ENST00000518569 PRAMEF25A6NGN4 478 aa5.19□□□□□ -1.58
VPS13B-207ENST00000518569 ZNF839A8K0R7 811 aa5.19□□□□□ -1.58
VPS13B-207ENST00000518569 KRT37O76014 449 aa5.19□□□□□ -1.58
VPS13B-207ENST00000518569 FKBP9O95302 570 aa5.19□□□□□ -1.58
VPS13B-207ENST00000518569 CFPP27918 469 aa5.19□□□□□ -1.58
VPS13B-207ENST00000518569 ADCYAP1R1P41586 468 aa5.19□□□□□ -1.58
VPS13B-207ENST00000518569 KIF11P52732 1056 aa5.19□□□□□ -1.58
VPS13B-207ENST00000518569 ITGA1P56199 1179 aa5.19□□□□□ -1.58
VPS13B-207ENST00000518569 IL2P60568 153 aa5.19□□□□□ -1.58
VPS13B-207ENST00000518569 PTPROQ16827 1216 aa5.19□□□□□ -1.58
VPS13B-207ENST00000518569 SKOR2Q2VWA4 1001 aaPredicted RBP5.19□□□□□ -1.58
VPS13B-207ENST00000518569 GPR158Q5T848 1215 aa5.19□□□□□ -1.58
VPS13B-207ENST00000518569 FKBP9P1Q75LS8 142 aa5.19□□□□□ -1.58
VPS13B-207ENST00000518569 STRA8Q7Z7C7 330 aa5.19□□□□□ -1.58
VPS13B-207ENST00000518569 C11orf74Q86VG3 221 aa5.19□□□□□ -1.58
VPS13B-207ENST00000518569 NME9Q86XW9 330 aa5.19□□□□□ -1.58
VPS13B-207ENST00000518569 ZZZ3Q8IYH5 903 aa5.19□□□□□ -1.58
VPS13B-207ENST00000518569 DTX3Q8N9I9 347 aa5.19□□□□□ -1.58
VPS13B-207ENST00000518569 IGDCC4Q8TDY8 1250 aa5.19□□□□□ -1.58
VPS13B-207ENST00000518569 CHTF18Q8WVB6 975 aa5.19□□□□□ -1.58
VPS13B-207ENST00000518569 GORASP1Q9BQQ3 440 aa5.19□□□□□ -1.58
VPS13B-207ENST00000518569 KRTAP4-9Q9BYQ8 210 aa5.19□□□□□ -1.58
VPS13B-207ENST00000518569 PCIF1Q9H4Z3 704 aa5.19□□□□□ -1.58
VPS13B-207ENST00000518569 THG1LQ9NWX6 298 aaKnown RBP5.19□□□□□ -1.58
VPS13B-207ENST00000518569 APOBEC2Q9Y235 224 aaKnown RBP5.19□□□□□ -1.58
VPS13B-207ENST00000518569 KCTD3Q9Y597 815 aa5.19□□□□□ -1.58
VPS13B-207ENST00000518569 PMF1-BGLAPU3KQ54 211 aa5.19□□□□□ -1.58
VPS13B-207ENST00000518569 CYP7B1O75881 506 aa5.18□□□□□ -1.58
VPS13B-207ENST00000518569 POU3F3P20264 500 aaPredicted RBP5.18□□□□□ -1.58
VPS13B-207ENST00000518569 LIMS1P48059 325 aa5.18□□□□□ -1.58
VPS13B-207ENST00000518569 PHC1P78364 1004 aa5.18□□□□□ -1.58
VPS13B-207ENST00000518569 PFKPQ01813 784 aa5.18□□□□□ -1.58
VPS13B-207ENST00000518569 STRN3Q13033 797 aa5.18□□□□□ -1.58
VPS13B-207ENST00000518569 SSPNQ14714 243 aa5.18□□□□□ -1.58
VPS13B-207ENST00000518569 TMEM132BQ14DG7 1078 aa5.18□□□□□ -1.58
VPS13B-207ENST00000518569 EPHA7Q15375 998 aa5.18□□□□□ -1.58
VPS13B-207ENST00000518569 KCNA10Q16322 511 aa5.18□□□□□ -1.58
VPS13B-207ENST00000518569 CATSPEREQ5SY80 951 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms