RNA–Protein interactions for RNA: ENST00000518371.2

MRPS28-203, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-203ENST00000518371 CLDN10P78369 228 aa7.07□□□□□ -1.28
MRPS28-203ENST00000518371 EXOSC10Q01780 885 aaKnown RBP7.07□□□□□ -1.28
MRPS28-203ENST00000518371 TROAPQ12815 778 aa7.07□□□□□ -1.28
MRPS28-203ENST00000518371 BAATQ14032 418 aaPredicted RBP7.07□□□□□ -1.28
MRPS28-203ENST00000518371 TEAD4Q15561 434 aa7.07□□□□□ -1.28
MRPS28-203ENST00000518371 QRICH1Q2TAL8 776 aa7.07□□□□□ -1.28
MRPS28-203ENST00000518371 USH1GQ495M9 461 aa7.07□□□□□ -1.28
MRPS28-203ENST00000518371 PRAMEF19Q5SWL8 479 aa7.07□□□□□ -1.28
MRPS28-203ENST00000518371 BLOC1S2Q6QNY1 142 aa7.07□□□□□ -1.28
MRPS28-203ENST00000518371 FBXO11Q86XK2 927 aa7.07□□□□□ -1.28
MRPS28-203ENST00000518371 HOMER1Q86YM7 354 aa7.07□□□□□ -1.28
MRPS28-203ENST00000518371 PIBF1Q8WXW3 757 aa7.07□□□□□ -1.28
MRPS28-203ENST00000518371 KCNB2Q92953 911 aa7.07□□□□□ -1.28
MRPS28-203ENST00000518371 TINF2Q9BSI4 451 aa7.07□□□□□ -1.28
MRPS28-203ENST00000518371 MYL10Q9BUA6 226 aa7.07□□□□□ -1.28
MRPS28-203ENST00000518371 AMNQ9BXJ7 453 aa7.07□□□□□ -1.28
MRPS28-203ENST00000518371 USP26Q9BXU7 913 aa7.07□□□□□ -1.28
MRPS28-203ENST00000518371 A1CFQ9NQ94 594 aaKnown RBP7.07□□□□□ -1.28
MRPS28-203ENST00000518371 PAK6Q9NQU5 681 aaPredicted RBP7.07□□□□□ -1.28
MRPS28-203ENST00000518371 MAD2L2Q9UI95 211 aa7.07□□□□□ -1.28
MRPS28-203ENST00000518371 CNPY2Q9Y2B0 182 aa7.07□□□□□ -1.28
MRPS28-203ENST00000518371 PFASO15067 1338 aa7.06□□□□□ -1.28
MRPS28-203ENST00000518371 ABCB11O95342 1321 aa7.06□□□□□ -1.28
MRPS28-203ENST00000518371 WDR19Q8NEZ3 1342 aa7.06□□□□□ -1.28
MRPS28-203ENST00000518371 MYH4Q9Y623 1939 aa7.06□□□□□ -1.28
MRPS28-203ENST00000518371 DNAJC25-GNG10A0A024R161 153 aa7.06□□□□□ -1.28
MRPS28-203ENST00000518371 ASB14A6NK59 587 aa7.06□□□□□ -1.28
MRPS28-203ENST00000518371 NFIBO00712 420 aa7.06□□□□□ -1.28
MRPS28-203ENST00000518371 ZBTB5O15062 677 aa7.06□□□□□ -1.28
MRPS28-203ENST00000518371 DYRK3O43781 588 aa7.06□□□□□ -1.28
MRPS28-203ENST00000518371 ATP9BO43861 1147 aa7.06□□□□□ -1.28
MRPS28-203ENST00000518371 TAL1P17542 331 aaPredicted RBP7.06□□□□□ -1.28
MRPS28-203ENST00000518371 RXRAP19793 462 aa7.06□□□□□ -1.28
MRPS28-203ENST00000518371 CASTP20810 708 aaKnown RBP7.06□□□□□ -1.28
MRPS28-203ENST00000518371 CALML3P27482 149 aa7.06□□□□□ -1.28
MRPS28-203ENST00000518371 NOS2P35228 1153 aa7.06□□□□□ -1.28
MRPS28-203ENST00000518371 CNTN2Q02246 1040 aa7.06□□□□□ -1.28
MRPS28-203ENST00000518371 TRAF1Q13077 416 aa7.06□□□□□ -1.28
MRPS28-203ENST00000518371 COL9A3Q14050 684 aaPredicted RBP7.06□□□□□ -1.28
MRPS28-203ENST00000518371 MAP3K21Q5TCX8 1036 aa7.06□□□□□ -1.28
MRPS28-203ENST00000518371 RNF207Q6ZRF8 634 aa7.06□□□□□ -1.28
MRPS28-203ENST00000518371 Q6ZUG5 572 aa7.06□□□□□ -1.28
MRPS28-203ENST00000518371 TRIM50Q86XT4 487 aa7.06□□□□□ -1.28
MRPS28-203ENST00000518371 MCF2L2Q86YR7 1114 aa7.06□□□□□ -1.28
MRPS28-203ENST00000518371 RAB11FIP4Q86YS3 637 aa7.06□□□□□ -1.28
MRPS28-203ENST00000518371 SLC9A9Q8IVB4 645 aa7.06□□□□□ -1.28
MRPS28-203ENST00000518371 CCDC144CPQ8IYA2 1237 aa7.06□□□□□ -1.28
MRPS28-203ENST00000518371 MSL3Q8N5Y2 521 aaKnown RBP7.06□□□□□ -1.28
MRPS28-203ENST00000518371 FANCBQ8NB91 859 aa7.06□□□□□ -1.28
MRPS28-203ENST00000518371 RRP36Q96EU6 259 aaKnown RBP7.06□□□□□ -1.28
MRPS28-203ENST00000518371 PIGSQ96S52 555 aa7.06□□□□□ -1.28
MRPS28-203ENST00000518371 MAP3K14Q99558 947 aa7.06□□□□□ -1.28
MRPS28-203ENST00000518371 LZTS2Q9BRK4 669 aa7.06□□□□□ -1.28
MRPS28-203ENST00000518371 CYP39A1Q9NYL5 469 aa7.06□□□□□ -1.28
MRPS28-203ENST00000518371 ADD3Q9UEY8 706 aaKnown RBP7.06□□□□□ -1.28
MRPS28-203ENST00000518371 DDX20Q9UHI6 824 aaKnown RBP7.06□□□□□ -1.28
MRPS28-203ENST00000518371 MRPL11Q9Y3B7 192 aaKnown RBP7.06□□□□□ -1.28
MRPS28-203ENST00000518371 PCDHA1Q9Y5I3 950 aa7.06□□□□□ -1.28
MRPS28-203ENST00000518371 DOCK3Q8IZD9 2030 aa7.06□□□□□ -1.28
MRPS28-203ENST00000518371 PNMA6FA0A0J9YX94 578 aa7.05□□□□□ -1.28
MRPS28-203ENST00000518371 KLF18A0A0U1RQI7 1052 aa7.05□□□□□ -1.28
MRPS28-203ENST00000518371 B4DLN1 442 aa7.05□□□□□ -1.28
MRPS28-203ENST00000518371 SEPT4O43236 478 aa7.05□□□□□ -1.28
MRPS28-203ENST00000518371 ZBTB43O43298 467 aa7.05□□□□□ -1.28
MRPS28-203ENST00000518371 MSCO60682 206 aa7.05□□□□□ -1.28
MRPS28-203ENST00000518371 FARP2O94887 1054 aaPredicted RBP7.05□□□□□ -1.28
MRPS28-203ENST00000518371 DKK1O94907 266 aa7.05□□□□□ -1.28
MRPS28-203ENST00000518371 SNAI1O95863 264 aaPredicted RBP7.05□□□□□ -1.28
MRPS28-203ENST00000518371 ARAFP10398 606 aa7.05□□□□□ -1.28
MRPS28-203ENST00000518371 CYBAP13498 195 aa7.05□□□□□ -1.28
MRPS28-203ENST00000518371 RPS6KB1P23443 525 aa7.05□□□□□ -1.28
MRPS28-203ENST00000518371 SMARCA1P28370 1054 aa7.05□□□□□ -1.28
MRPS28-203ENST00000518371 MRPL12P52815 198 aaKnown RBP7.05□□□□□ -1.28
MRPS28-203ENST00000518371 ARMCX2Q7L311 632 aa7.05□□□□□ -1.28
MRPS28-203ENST00000518371 SGMS1Q86VZ5 419 aa7.05□□□□□ -1.28
MRPS28-203ENST00000518371 FCHSD1Q86WN1 690 aa7.05□□□□□ -1.28
MRPS28-203ENST00000518371 MICU3Q86XE3 530 aa7.05□□□□□ -1.28
MRPS28-203ENST00000518371 CCDC82Q8N4S0 544 aa7.05□□□□□ -1.28
MRPS28-203ENST00000518371 FAM133AQ8N9E0 248 aa7.05□□□□□ -1.28
MRPS28-203ENST00000518371 ARRDC4Q8NCT1 418 aa7.05□□□□□ -1.28
MRPS28-203ENST00000518371 RGS22Q8NE09 1264 aa7.05□□□□□ -1.28
MRPS28-203ENST00000518371 TRPV1Q8NER1 839 aa7.05□□□□□ -1.28
MRPS28-203ENST00000518371 TPCN2Q8NHX9 752 aa7.05□□□□□ -1.28
MRPS28-203ENST00000518371 CLEC4DQ8WXI8 215 aa7.05□□□□□ -1.28
MRPS28-203ENST00000518371 BRF1Q92994 677 aa7.05□□□□□ -1.28
MRPS28-203ENST00000518371 MPHOSPH6Q99547 160 aaKnown RBP7.05□□□□□ -1.28
MRPS28-203ENST00000518371 RIOX1Q9H6W3 641 aa7.05□□□□□ -1.28
MRPS28-203ENST00000518371 SEC63Q9UGP8 760 aaKnown RBP7.05□□□□□ -1.28
MRPS28-203ENST00000518371 NRBP1Q9UHY1 535 aa7.05□□□□□ -1.28
MRPS28-203ENST00000518371 ZHX1Q9UKY1 873 aaPredicted RBP7.05□□□□□ -1.28
MRPS28-203ENST00000518371 FAM184BQ9ULE4 1060 aa7.05□□□□□ -1.28
MRPS28-203ENST00000518371 CYP46A1Q9Y6A2 500 aa7.05□□□□□ -1.28
MRPS28-203ENST00000518371 KIAA0100Q14667 2235 aaKnown RBP7.05□□□□□ -1.28
MRPS28-203ENST00000518371 RLFQ13129 1914 aa7.05□□□□□ -1.28
MRPS28-203ENST00000518371 MGAMO43451 1857 aa7.04□□□□□ -1.28
MRPS28-203ENST00000518371 SYNGAP1Q96PV0 1343 aa7.04□□□□□ -1.28
MRPS28-203ENST00000518371 GOLGA8AA7E2F4 631 aa7.04□□□□□ -1.28
MRPS28-203ENST00000518371 GOLGA8BA8MQT2 603 aa7.04□□□□□ -1.28
MRPS28-203ENST00000518371 EML1O00423 815 aa7.04□□□□□ -1.28
MRPS28-203ENST00000518371 CYTH3O43739 400 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms