RNA–Protein interactions for RNA: ENST00000517667.5

TRAPPC9-203, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 518 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-203ENST00000517667 NPAS4Q8IUM7 802 aa13.23□□□□□ -0.29
TRAPPC9-203ENST00000517667 SPPL3Q8TCT6 385 aa13.23□□□□□ -0.29
TRAPPC9-203ENST00000517667 RIOX1Q9H6W3 641 aa13.23□□□□□ -0.29
TRAPPC9-203ENST00000517667 USP15Q9Y4E8 981 aaPredicted RBP13.23□□□□□ -0.29
TRAPPC9-203ENST00000517667 SQORQ9Y6N5 450 aa13.23□□□□□ -0.29
TRAPPC9-203ENST00000517667 CACNA1HO95180 2353 aa13.22□□□□□ -0.29
TRAPPC9-203ENST00000517667 SPTBN4Q9H254 2564 aa13.22□□□□□ -0.29
TRAPPC9-203ENST00000517667 LOXHD1Q8IVV2 1947 aa13.22□□□□□ -0.29
TRAPPC9-203ENST00000517667 PNMA6FA0A0J9YX94 578 aa13.22□□□□□ -0.29
TRAPPC9-203ENST00000517667 MBLAC1A4D2B0 266 aaPredicted RBP13.22□□□□□ -0.29
TRAPPC9-203ENST00000517667 SRGAP2BP0DMP2 458 aa13.22□□□□□ -0.29
TRAPPC9-203ENST00000517667 DNAJB1P25685 340 aa13.22□□□□□ -0.29
TRAPPC9-203ENST00000517667 TCF7P36402 384 aaPredicted RBP13.22□□□□□ -0.29
TRAPPC9-203ENST00000517667 SEMA3FQ13275 785 aa13.22□□□□□ -0.29
TRAPPC9-203ENST00000517667 PCNX4Q63HM2 1172 aa13.22□□□□□ -0.29
TRAPPC9-203ENST00000517667 RUFY4Q6ZNE9 571 aa13.22□□□□□ -0.29
TRAPPC9-203ENST00000517667 FAM43BQ6ZT52 329 aaPredicted RBP13.22□□□□□ -0.29
TRAPPC9-203ENST00000517667 ADGRD2Q7Z7M1 963 aa13.22□□□□□ -0.29
TRAPPC9-203ENST00000517667 NLRX1Q86UT6 975 aa13.22□□□□□ -0.29
TRAPPC9-203ENST00000517667 KLHL23Q8NBE8 558 aa13.22□□□□□ -0.29
TRAPPC9-203ENST00000517667 POF1BQ8WVV4 589 aa13.22□□□□□ -0.29
TRAPPC9-203ENST00000517667 PIGSQ96S52 555 aa13.22□□□□□ -0.29
TRAPPC9-203ENST00000517667 DSCC1Q9BVC3 393 aa13.22□□□□□ -0.29
TRAPPC9-203ENST00000517667 ERAP1Q9NZ08 941 aa13.22□□□□□ -0.29
TRAPPC9-203ENST00000517667 BARX2Q9UMQ3 279 aaPredicted RBP13.22□□□□□ -0.29
TRAPPC9-203ENST00000517667 DMDP11532 3685 aa13.21□□□□□ -0.29
TRAPPC9-203ENST00000517667 M0QZ92 97 aa13.21□□□□□ -0.29
TRAPPC9-203ENST00000517667 HIP1O00291 1037 aa13.21□□□□□ -0.29
TRAPPC9-203ENST00000517667 GLP2RO95838 553 aa13.21□□□□□ -0.29
TRAPPC9-203ENST00000517667 MRPS6P82932 125 aaKnown RBP13.21□□□□□ -0.29
TRAPPC9-203ENST00000517667 SP4Q02446 784 aa13.21□□□□□ -0.29
TRAPPC9-203ENST00000517667 UBE3AQ05086 875 aa13.21□□□□□ -0.29
TRAPPC9-203ENST00000517667 GRM4Q14833 912 aa13.21□□□□□ -0.29
TRAPPC9-203ENST00000517667 SEC23AQ15436 765 aa13.21□□□□□ -0.29
TRAPPC9-203ENST00000517667 GRIK4Q16099 956 aa13.21□□□□□ -0.29
TRAPPC9-203ENST00000517667 IER5Q5VY09 327 aa13.21□□□□□ -0.29
TRAPPC9-203ENST00000517667 CWC27Q6UX04 472 aaKnown RBP13.21□□□□□ -0.29
TRAPPC9-203ENST00000517667 CRIPAKQ8N1N5 446 aa13.21□□□□□ -0.29
TRAPPC9-203ENST00000517667 DNAJB3Q8WWF6 145 aa13.21□□□□□ -0.29
TRAPPC9-203ENST00000517667 ATOH1Q92858 354 aaPredicted RBP13.21□□□□□ -0.29
TRAPPC9-203ENST00000517667 ASIC4Q96FT7 647 aa13.21□□□□□ -0.29
TRAPPC9-203ENST00000517667 CDHR1Q96JP9 859 aa13.21□□□□□ -0.29
TRAPPC9-203ENST00000517667 RPGRIP1Q96KN7 1286 aa13.21□□□□□ -0.29
TRAPPC9-203ENST00000517667 CDCA3Q99618 268 aaPredicted RBP13.21□□□□□ -0.29
TRAPPC9-203ENST00000517667 TLE6Q9H808 572 aa13.21□□□□□ -0.29
TRAPPC9-203ENST00000517667 DIAPH3Q9NSV4 1193 aa13.21□□□□□ -0.29
TRAPPC9-203ENST00000517667 RNF216Q9NWF9 866 aaPredicted RBP13.21□□□□□ -0.29
TRAPPC9-203ENST00000517667 RTEL1Q9NZ71 1219 aa13.21□□□□□ -0.29
TRAPPC9-203ENST00000517667 SUPT16HQ9Y5B9 1047 aaKnown RBP13.21□□□□□ -0.29
TRAPPC9-203ENST00000517667 CDY2AQ9Y6F7 541 aa13.21□□□□□ -0.29
TRAPPC9-203ENST00000517667 BAZ2BQ9UIF8 2168 aaKnown RBP13.2□□□□□ -0.3
TRAPPC9-203ENST00000517667 SCG2P13521 617 aa13.2□□□□□ -0.3
TRAPPC9-203ENST00000517667 AVPR2P30518 371 aa13.2□□□□□ -0.3
TRAPPC9-203ENST00000517667 CD52P31358 61 aa13.2□□□□□ -0.3
TRAPPC9-203ENST00000517667 PTPN21Q16825 1174 aa13.2□□□□□ -0.3
TRAPPC9-203ENST00000517667 RBM23Q86U06 439 aaKnown RBP13.2□□□□□ -0.3
TRAPPC9-203ENST00000517667 SMARCC2Q8TAQ2 1214 aa13.2□□□□□ -0.3
TRAPPC9-203ENST00000517667 LINC01599Q8WXQ3 324 aa13.2□□□□□ -0.3
TRAPPC9-203ENST00000517667 TNPO1Q92973 898 aaKnown RBP13.2□□□□□ -0.3
TRAPPC9-203ENST00000517667 CUL5Q93034 780 aa13.2□□□□□ -0.3
TRAPPC9-203ENST00000517667 AAASQ9NRG9 546 aa13.2□□□□□ -0.3
TRAPPC9-203ENST00000517667 FAM86C1Q9NVL1 165 aa13.2□□□□□ -0.3
TRAPPC9-203ENST00000517667 LRFN2Q9ULH4 789 aa13.2□□□□□ -0.3
TRAPPC9-203ENST00000517667 PCDHB12Q9Y5F1 795 aa13.2□□□□□ -0.3
TRAPPC9-203ENST00000517667 PLXNA3P51805 1871 aa13.2□□□□□ -0.3
TRAPPC9-203ENST00000517667 FNDC1Q4ZHG4 1894 aaPredicted RBP13.19□□□□□ -0.3
TRAPPC9-203ENST00000517667 RRN3P2A6NIE6 340 aa13.19□□□□□ -0.3
TRAPPC9-203ENST00000517667 PROB1E7EW31 1015 aa13.19□□□□□ -0.3
TRAPPC9-203ENST00000517667 VCPP55072 806 aaKnown RBP13.19□□□□□ -0.3
TRAPPC9-203ENST00000517667 PAK2Q13177 524 aa13.19□□□□□ -0.3
TRAPPC9-203ENST00000517667 HDAC1Q13547 482 aaPredicted RBP13.19□□□□□ -0.3
TRAPPC9-203ENST00000517667 PAN2Q504Q3 1202 aaKnown RBP13.19□□□□□ -0.3
TRAPPC9-203ENST00000517667 MARCH8Q5T0T0 291 aa13.19□□□□□ -0.3
TRAPPC9-203ENST00000517667 PDE12Q6L8Q7 609 aaKnown RBP13.19□□□□□ -0.3
TRAPPC9-203ENST00000517667 MICAL1Q8TDZ2 1067 aa13.19□□□□□ -0.3
TRAPPC9-203ENST00000517667 SEPT1Q8WYJ6 367 aa13.19□□□□□ -0.3
TRAPPC9-203ENST00000517667 SUSD6Q92537 303 aa13.19□□□□□ -0.3
TRAPPC9-203ENST00000517667 GLG1Q92896 1179 aa13.19□□□□□ -0.3
TRAPPC9-203ENST00000517667 GPRASP2Q96D09 838 aa13.19□□□□□ -0.3
TRAPPC9-203ENST00000517667 NEK1Q96PY6 1258 aa13.19□□□□□ -0.3
TRAPPC9-203ENST00000517667 SMARCAD1Q9H4L7 1026 aa13.19□□□□□ -0.3
TRAPPC9-203ENST00000517667 AGO3Q9H9G7 860 aaKnown RBP13.19□□□□□ -0.3
TRAPPC9-203ENST00000517667 TLR9Q9NR96 1032 aa13.19□□□□□ -0.3
TRAPPC9-203ENST00000517667 IGSF9BQ9UPX0 1349 aa13.18□□□□□ -0.3
TRAPPC9-203ENST00000517667 ERICH2A1L162 156 aa13.18□□□□□ -0.3
TRAPPC9-203ENST00000517667 PIK3CDO00329 1044 aa13.18□□□□□ -0.3
TRAPPC9-203ENST00000517667 CYTH3O43739 400 aa13.18□□□□□ -0.3
TRAPPC9-203ENST00000517667 MARK3P27448 753 aa13.18□□□□□ -0.3
TRAPPC9-203ENST00000517667 TRDNQ13061 729 aa13.18□□□□□ -0.3
TRAPPC9-203ENST00000517667 ZBTB33Q86T24 672 aa13.18□□□□□ -0.3
TRAPPC9-203ENST00000517667 ATP8B4Q8TF62 1192 aa13.18□□□□□ -0.3
TRAPPC9-203ENST00000517667 PADI3Q9ULW8 664 aa13.18□□□□□ -0.3
TRAPPC9-203ENST00000517667 TELO2Q9Y4R8 837 aa13.18□□□□□ -0.3
TRAPPC9-203ENST00000517667 TRPV2Q9Y5S1 764 aa13.18□□□□□ -0.3
TRAPPC9-203ENST00000517667 PPFIA3O75145 1194 aa13.17□□□□□ -0.3
TRAPPC9-203ENST00000517667 KCNA2P16389 499 aa13.17□□□□□ -0.3
TRAPPC9-203ENST00000517667 IGBP1P78318 339 aa13.17□□□□□ -0.3
TRAPPC9-203ENST00000517667 SART3Q15020 963 aaKnown RBP13.17□□□□□ -0.3
TRAPPC9-203ENST00000517667 DUSP6Q16828 381 aa13.17□□□□□ -0.3
TRAPPC9-203ENST00000517667 SLC35G1Q2M3R5 365 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms