RNA–Protein interactions for RNA: ENST00000517660.1

PDGFRB-203, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 3

Gene PDGFRB, Length 611 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-203ENST00000517660 STXBP3O00186 592 aa12.09□□□□□ -0.47
PDGFRB-203ENST00000517660 ATP9AO75110 1047 aa12.09□□□□□ -0.47
PDGFRB-203ENST00000517660 BAIAP3O94812 1187 aa12.09□□□□□ -0.47
PDGFRB-203ENST00000517660 CXCL10P02778 98 aa12.09□□□□□ -0.47
PDGFRB-203ENST00000517660 SMIM10L2AP0DMW4 78 aa12.09□□□□□ -0.47
PDGFRB-203ENST00000517660 SMIM10L2BP0DMW5 78 aa12.09□□□□□ -0.47
PDGFRB-203ENST00000517660 GNAT1P11488 350 aa12.09□□□□□ -0.47
PDGFRB-203ENST00000517660 KCNA2P16389 499 aa12.09□□□□□ -0.47
PDGFRB-203ENST00000517660 RPS6KB1P23443 525 aa12.09□□□□□ -0.47
PDGFRB-203ENST00000517660 ADCY7P51828 1080 aa12.09□□□□□ -0.47
PDGFRB-203ENST00000517660 ERVK-21P61565 698 aa12.09□□□□□ -0.47
PDGFRB-203ENST00000517660 MTMR1Q13613 665 aa12.09□□□□□ -0.47
PDGFRB-203ENST00000517660 HIC1Q14526 733 aa12.09□□□□□ -0.47
PDGFRB-203ENST00000517660 COL19A1Q14993 1142 aa12.09□□□□□ -0.47
PDGFRB-203ENST00000517660 TCTN1Q2MV58 587 aa12.09□□□□□ -0.47
PDGFRB-203ENST00000517660 UTP14CQ5TAP6 766 aaKnown RBP12.09□□□□□ -0.47
PDGFRB-203ENST00000517660 TYW1BQ6NUM6 668 aa12.09□□□□□ -0.47
PDGFRB-203ENST00000517660 BMP8AQ7Z5Y6 402 aa12.09□□□□□ -0.47
PDGFRB-203ENST00000517660 SERINC5Q86VE9 423 aa12.09□□□□□ -0.47
PDGFRB-203ENST00000517660 ADHFE1Q8IWW8 467 aa12.09□□□□□ -0.47
PDGFRB-203ENST00000517660 SEPT1Q8WYJ6 367 aa12.09□□□□□ -0.47
PDGFRB-203ENST00000517660 ATP6V0A1Q93050 837 aa12.09□□□□□ -0.47
PDGFRB-203ENST00000517660 RNPEPQ9H4A4 650 aa12.09□□□□□ -0.47
PDGFRB-203ENST00000517660 ZNF215Q9UL58 517 aaPredicted RBP12.09□□□□□ -0.47
PDGFRB-203ENST00000517660 COL4A6Q14031 1691 aa12.09□□□□□ -0.47
PDGFRB-203ENST00000517660 MYH6P13533 1939 aa12.08□□□□□ -0.48
PDGFRB-203ENST00000517660 LINC01553A4QN01 128 aa12.08□□□□□ -0.48
PDGFRB-203ENST00000517660 KRT37O76014 449 aa12.08□□□□□ -0.48
PDGFRB-203ENST00000517660 HOXC8P31273 242 aa12.08□□□□□ -0.48
PDGFRB-203ENST00000517660 DEFB103AP81534 67 aa12.08□□□□□ -0.48
PDGFRB-203ENST00000517660 SP4Q02446 784 aa12.08□□□□□ -0.48
PDGFRB-203ENST00000517660 PFKFB3Q16875 520 aaPredicted RBP12.08□□□□□ -0.48
PDGFRB-203ENST00000517660 PUS10Q3MIT2 529 aaKnown RBP12.08□□□□□ -0.48
PDGFRB-203ENST00000517660 ZNF618Q5T7W0 954 aa12.08□□□□□ -0.48
PDGFRB-203ENST00000517660 ERICH6BQ5W0A0 696 aa12.08□□□□□ -0.48
PDGFRB-203ENST00000517660 TRAF7Q6Q0C0 670 aa12.08□□□□□ -0.48
PDGFRB-203ENST00000517660 ASCL5Q7RTU5 278 aa12.08□□□□□ -0.48
PDGFRB-203ENST00000517660 WNT8BQ93098 351 aa12.08□□□□□ -0.48
PDGFRB-203ENST00000517660 MXRA8Q9BRK3 442 aa12.08□□□□□ -0.48
PDGFRB-203ENST00000517660 AGXT2Q9BYV1 514 aa12.08□□□□□ -0.48
PDGFRB-203ENST00000517660 PPP4R2Q9NY27 417 aa12.08□□□□□ -0.48
PDGFRB-203ENST00000517660 PRKAG3Q9UGI9 489 aa12.08□□□□□ -0.48
PDGFRB-203ENST00000517660 TELO2Q9Y4R8 837 aa12.08□□□□□ -0.48
PDGFRB-203ENST00000517660 GSTTP1A0A1W2PQM5 241 aa12.07□□□□□ -0.48
PDGFRB-203ENST00000517660 KIF28PB7ZC32 967 aa12.07□□□□□ -0.48
PDGFRB-203ENST00000517660 TREHO43280 583 aa12.07□□□□□ -0.48
PDGFRB-203ENST00000517660 PRPF3O43395 683 aaKnown RBP12.07□□□□□ -0.48
PDGFRB-203ENST00000517660 NBNO60934 754 aa12.07□□□□□ -0.48
PDGFRB-203ENST00000517660 SCG2P13521 617 aa12.07□□□□□ -0.48
PDGFRB-203ENST00000517660 TCF7P36402 384 aaPredicted RBP12.07□□□□□ -0.48
PDGFRB-203ENST00000517660 THPOP40225 353 aa12.07□□□□□ -0.48
PDGFRB-203ENST00000517660 KCNJ6P48051 423 aa12.07□□□□□ -0.48
PDGFRB-203ENST00000517660 EVCP57679 992 aa12.07□□□□□ -0.48
PDGFRB-203ENST00000517660 WDR5P61964 334 aaKnown RBP12.07□□□□□ -0.48
PDGFRB-203ENST00000517660 AP3B2Q13367 1082 aa12.07□□□□□ -0.48
PDGFRB-203ENST00000517660 CNKSR3Q6P9H4 555 aa12.07□□□□□ -0.48
PDGFRB-203ENST00000517660 ERMP1Q7Z2K6 904 aa12.07□□□□□ -0.48
PDGFRB-203ENST00000517660 EDAQ92838 391 aa12.07□□□□□ -0.48
PDGFRB-203ENST00000517660 ANO3Q9BYT9 981 aa12.07□□□□□ -0.48
PDGFRB-203ENST00000517660 TANC1Q9C0D5 1861 aa12.07□□□□□ -0.48
PDGFRB-203ENST00000517660 ZSWIM6Q9HCJ5 1215 aa12.07□□□□□ -0.48
PDGFRB-203ENST00000517660 SETD4Q9NVD3 440 aa12.07□□□□□ -0.48
PDGFRB-203ENST00000517660 ABHD14A-ACY1A0A1B0GW23 586 aa12.06□□□□□ -0.48
PDGFRB-203ENST00000517660 RSPH10B2B2RC85 870 aa12.06□□□□□ -0.48
PDGFRB-203ENST00000517660 MEIS1O00470 390 aa12.06□□□□□ -0.48
PDGFRB-203ENST00000517660 EFCAB14O75071 495 aa12.06□□□□□ -0.48
PDGFRB-203ENST00000517660 CAND2O75155 1236 aa12.06□□□□□ -0.48
PDGFRB-203ENST00000517660 RSPH10BP0C881 870 aa12.06□□□□□ -0.48
PDGFRB-203ENST00000517660 LTBRP36941 435 aa12.06□□□□□ -0.48
PDGFRB-203ENST00000517660 CLK2P49760 499 aaKnown RBP12.06□□□□□ -0.48
PDGFRB-203ENST00000517660 VCPP55072 806 aaKnown RBP12.06□□□□□ -0.48
PDGFRB-203ENST00000517660 AKAP17AQ02040 695 aaKnown RBP12.06□□□□□ -0.48
PDGFRB-203ENST00000517660 IKBKEQ14164 716 aa12.06□□□□□ -0.48
PDGFRB-203ENST00000517660 CEP55Q53EZ4 464 aa12.06□□□□□ -0.48
PDGFRB-203ENST00000517660 MCTP2Q6DN12 878 aa12.06□□□□□ -0.48
PDGFRB-203ENST00000517660 RUFY3Q7L099 469 aa12.06□□□□□ -0.48
PDGFRB-203ENST00000517660 TRIM50Q86XT4 487 aa12.06□□□□□ -0.48
PDGFRB-203ENST00000517660 RNF135Q8IUD6 432 aa12.06□□□□□ -0.48
PDGFRB-203ENST00000517660 CYP2W1Q8TAV3 490 aa12.06□□□□□ -0.48
PDGFRB-203ENST00000517660 CCDC12Q8WUD4 166 aaPredicted RBP12.06□□□□□ -0.48
PDGFRB-203ENST00000517660 PGBD1Q96JS3 809 aa12.06□□□□□ -0.48
PDGFRB-203ENST00000517660 TM6SF1Q9BZW5 370 aa12.06□□□□□ -0.48
PDGFRB-203ENST00000517660 SMARCAD1Q9H4L7 1026 aa12.06□□□□□ -0.48
PDGFRB-203ENST00000517660 C6orf50Q9HD87 102 aa12.06□□□□□ -0.48
PDGFRB-203ENST00000517660 KCNH7Q9NS40 1196 aa12.06□□□□□ -0.48
PDGFRB-203ENST00000517660 TMEM260Q9NX78 707 aa12.06□□□□□ -0.48
PDGFRB-203ENST00000517660 PKD2L1Q9P0L9 805 aa12.06□□□□□ -0.48
PDGFRB-203ENST00000517660 DMXL1Q9Y485 3027 aa12.06□□□□□ -0.48
PDGFRB-203ENST00000517660 KMT2BQ9UMN6 2715 aaPredicted RBP12.06□□□□□ -0.48
PDGFRB-203ENST00000517660 EMSYQ7Z589 1322 aa12.06□□□□□ -0.48
PDGFRB-203ENST00000517660 NRCAMQ92823 1304 aa12.06□□□□□ -0.48
PDGFRB-203ENST00000517660 KIAA1217Q5T5P2 1943 aa12.05□□□□□ -0.48
PDGFRB-203ENST00000517660 TET1Q8NFU7 2136 aa12.05□□□□□ -0.48
PDGFRB-203ENST00000517660 SIP14410 1827 aa12.05□□□□□ -0.48
PDGFRB-203ENST00000517660 ESYT2A0FGR8 921 aa12.05□□□□□ -0.48
PDGFRB-203ENST00000517660 TMEM221A6NGB7 291 aa12.05□□□□□ -0.48
PDGFRB-203ENST00000517660 M0R296 226 aa12.05□□□□□ -0.48
PDGFRB-203ENST00000517660 LGR5O75473 907 aa12.05□□□□□ -0.48
PDGFRB-203ENST00000517660 ARP10275 920 aa12.05□□□□□ -0.48
PDGFRB-203ENST00000517660 PDIA3P30101 505 aaKnown RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms