RNA–Protein interactions for RNA: ENST00000517275.3

RNU6-840P-201, Transcript of RNA, U6 small nuclear 840, pseudogene, humanhuman

BASIC

Gene RNU6-840P, Length 65 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-840P-201ENST00000517275 GSK3AP49840 483 aa4.35□□□□□ -1.71
RNU6-840P-201ENST00000517275 MANFP55145 182 aaKnown RBP4.35□□□□□ -1.71
RNU6-840P-201ENST00000517275 ADKP55263 362 aaKnown RBP4.35□□□□□ -1.71
RNU6-840P-201ENST00000517275 KCNMA1Q12791 1236 aa4.35□□□□□ -1.71
RNU6-840P-201ENST00000517275 BIRC2Q13490 618 aa4.35□□□□□ -1.71
RNU6-840P-201ENST00000517275 PDCD1Q15116 288 aa4.35□□□□□ -1.71
RNU6-840P-201ENST00000517275 SEC23AQ15436 765 aa4.35□□□□□ -1.71
RNU6-840P-201ENST00000517275 RRP12Q5JTH9 1297 aaKnown RBP4.35□□□□□ -1.71
RNU6-840P-201ENST00000517275 CATSPEREQ5SY80 951 aa4.35□□□□□ -1.71
RNU6-840P-201ENST00000517275 GALNT18Q6P9A2 607 aa4.35□□□□□ -1.71
RNU6-840P-201ENST00000517275 AMOTL1Q8IY63 956 aa4.35□□□□□ -1.71
RNU6-840P-201ENST00000517275 FAM43AQ8N2R8 423 aa4.35□□□□□ -1.71
RNU6-840P-201ENST00000517275 PDZD8Q8NEN9 1154 aa4.35□□□□□ -1.71
RNU6-840P-201ENST00000517275 SYTL4Q96C24 671 aaPredicted RBP4.35□□□□□ -1.71
RNU6-840P-201ENST00000517275 TEKT5Q96M29 485 aa4.35□□□□□ -1.71
RNU6-840P-201ENST00000517275 ALPK1Q96QP1 1244 aa4.35□□□□□ -1.71
RNU6-840P-201ENST00000517275 LRRC4CQ9HCJ2 640 aa4.35□□□□□ -1.71
RNU6-840P-201ENST00000517275 DDX21Q9NR30 783 aaKnown RBP eCLIP4.35□□□□□ -1.71
RNU6-840P-201ENST00000517275 TOMM22Q9NS69 142 aa4.35□□□□□ -1.71
RNU6-840P-201ENST00000517275 MKS1Q9NXB0 559 aa4.35□□□□□ -1.71
RNU6-840P-201ENST00000517275 ASH2LQ9UBL3 628 aa4.35□□□□□ -1.71
RNU6-840P-201ENST00000517275 FBLN5Q9UBX5 448 aa4.35□□□□□ -1.71
RNU6-840P-201ENST00000517275 EBF1Q9UH73 591 aa4.35□□□□□ -1.71
RNU6-840P-201ENST00000517275 TMEM59LQ9UK28 342 aa4.35□□□□□ -1.71
RNU6-840P-201ENST00000517275 COMMD10Q9Y6G5 202 aa4.35□□□□□ -1.71
RNU6-840P-201ENST00000517275 TAF6LQ9Y6J9 622 aa4.35□□□□□ -1.71
RNU6-840P-201ENST00000517275 ANO9A1A5B4 782 aa4.34□□□□□ -1.71
RNU6-840P-201ENST00000517275 KLHL33A6NCF5 533 aa4.34□□□□□ -1.71
RNU6-840P-201ENST00000517275 NOTOA8MTQ0 251 aa4.34□□□□□ -1.71
RNU6-840P-201ENST00000517275 HGSO14964 777 aaPredicted RBP4.34□□□□□ -1.71
RNU6-840P-201ENST00000517275 H2AFYO75367 372 aaKnown RBP4.34□□□□□ -1.71
RNU6-840P-201ENST00000517275 MAFO75444 373 aaPredicted RBP4.34□□□□□ -1.71
RNU6-840P-201ENST00000517275 CT47B1P0C2W7 299 aaPredicted RBP4.34□□□□□ -1.71
RNU6-840P-201ENST00000517275 PTPN1P18031 435 aaKnown RBP4.34□□□□□ -1.71
RNU6-840P-201ENST00000517275 KRT15P19012 456 aa4.34□□□□□ -1.71
RNU6-840P-201ENST00000517275 AGXTP21549 392 aa4.34□□□□□ -1.71
RNU6-840P-201ENST00000517275 CCND1P24385 295 aa4.34□□□□□ -1.71
RNU6-840P-201ENST00000517275 MVKQ03426 396 aa4.34□□□□□ -1.71
RNU6-840P-201ENST00000517275 TCIRG1Q13488 830 aa4.34□□□□□ -1.71
RNU6-840P-201ENST00000517275 ODF1Q14990 250 aa4.34□□□□□ -1.71
RNU6-840P-201ENST00000517275 AOC3Q16853 763 aa4.34□□□□□ -1.71
RNU6-840P-201ENST00000517275 STEAP3Q658P3 488 aa4.34□□□□□ -1.71
RNU6-840P-201ENST00000517275 CHST15Q7LFX5 561 aaPredicted RBP4.34□□□□□ -1.71
RNU6-840P-201ENST00000517275 KCNK18Q7Z418 384 aa4.34□□□□□ -1.71
RNU6-840P-201ENST00000517275 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.34□□□□□ -1.71
RNU6-840P-201ENST00000517275 PNMA8AQ86V59 439 aaPredicted RBP4.34□□□□□ -1.71
RNU6-840P-201ENST00000517275 CXorf67Q86X51 503 aaPredicted RBP4.34□□□□□ -1.71
RNU6-840P-201ENST00000517275 TPH2Q8IWU9 490 aa4.34□□□□□ -1.71
RNU6-840P-201ENST00000517275 TRIM48Q8IWZ4 208 aa4.34□□□□□ -1.71
RNU6-840P-201ENST00000517275 SEC14L1Q92503 715 aa4.34□□□□□ -1.71
RNU6-840P-201ENST00000517275 CLIP3Q96DZ5 547 aa4.34□□□□□ -1.71
RNU6-840P-201ENST00000517275 CCDC120Q96HB5 630 aa4.34□□□□□ -1.71
RNU6-840P-201ENST00000517275 SP110Q9HB58 689 aa4.34□□□□□ -1.71
RNU6-840P-201ENST00000517275 ANLNQ9NQW6 1124 aa4.34□□□□□ -1.71
RNU6-840P-201ENST00000517275 CHST12Q9NRB3 414 aa4.34□□□□□ -1.71
RNU6-840P-201ENST00000517275 C1orf112Q9NSG2 853 aa4.34□□□□□ -1.71
RNU6-840P-201ENST00000517275 IMPACTQ9P2X3 320 aa4.34□□□□□ -1.71
RNU6-840P-201ENST00000517275 MYOTQ9UBF9 498 aa4.34□□□□□ -1.71
RNU6-840P-201ENST00000517275 NOB1Q9ULX3 412 aaKnown RBP4.34□□□□□ -1.71
RNU6-840P-201ENST00000517275 WASF3Q9UPY6 502 aa4.34□□□□□ -1.71
RNU6-840P-201ENST00000517275 INVSQ9Y283 1065 aa4.34□□□□□ -1.71
RNU6-840P-201ENST00000517275 NOC2LQ9Y3T9 749 aaKnown RBP4.34□□□□□ -1.71
RNU6-840P-201ENST00000517275 TELO2Q9Y4R8 837 aa4.34□□□□□ -1.71
RNU6-840P-201ENST00000517275 ASB1Q9Y576 335 aa4.34□□□□□ -1.71
RNU6-840P-201ENST00000517275 FITM1A5D6W6 292 aa4.33□□□□□ -1.72
RNU6-840P-201ENST00000517275 RASSF10A6NK89 507 aa4.33□□□□□ -1.72
RNU6-840P-201ENST00000517275 SCDO00767 359 aa4.33□□□□□ -1.72
RNU6-840P-201ENST00000517275 BUB1BO60566 1050 aaPredicted RBP4.33□□□□□ -1.72
RNU6-840P-201ENST00000517275 USP2O75604 605 aaPredicted RBP4.33□□□□□ -1.72
RNU6-840P-201ENST00000517275 KRT37O76014 449 aa4.33□□□□□ -1.72
RNU6-840P-201ENST00000517275 FUCA1P04066 466 aa4.33□□□□□ -1.72
RNU6-840P-201ENST00000517275 HRGP04196 525 aa4.33□□□□□ -1.72
RNU6-840P-201ENST00000517275 MTHFD2P13995 350 aa4.33□□□□□ -1.72
RNU6-840P-201ENST00000517275 HSPA6P17066 643 aa4.33□□□□□ -1.72
RNU6-840P-201ENST00000517275 PTX3P26022 381 aaPredicted RBP4.33□□□□□ -1.72
RNU6-840P-201ENST00000517275 RTP1P59025 263 aa4.33□□□□□ -1.72
RNU6-840P-201ENST00000517275 MRPS9P82933 396 aaKnown RBP4.33□□□□□ -1.72
RNU6-840P-201ENST00000517275 HTRA3P83110 453 aa4.33□□□□□ -1.72
RNU6-840P-201ENST00000517275 GALEQ14376 348 aa4.33□□□□□ -1.72
RNU6-840P-201ENST00000517275 RSPO4Q2I0M5 234 aaPredicted RBP4.33□□□□□ -1.72
RNU6-840P-201ENST00000517275 ANO4Q32M45 955 aa4.33□□□□□ -1.72
RNU6-840P-201ENST00000517275 ATAT1Q5SQI0 421 aa4.33□□□□□ -1.72
RNU6-840P-201ENST00000517275 EFCAB2Q5VUJ9 269 aa4.33□□□□□ -1.72
RNU6-840P-201ENST00000517275 CPZQ66K79 652 aa4.33□□□□□ -1.72
RNU6-840P-201ENST00000517275 PGM2L1Q6PCE3 622 aa4.33□□□□□ -1.72
RNU6-840P-201ENST00000517275 C11orf96Q7Z7L8 435 aa4.33□□□□□ -1.72
RNU6-840P-201ENST00000517275 RTN4RL1Q86UN2 441 aaPredicted RBP4.33□□□□□ -1.72
RNU6-840P-201ENST00000517275 CABP7Q86V35 215 aa4.33□□□□□ -1.72
RNU6-840P-201ENST00000517275 PHYKPLQ8IUZ5 450 aa4.33□□□□□ -1.72
RNU6-840P-201ENST00000517275 BCL7CQ8WUZ0 217 aaPredicted RBP4.33□□□□□ -1.72
RNU6-840P-201ENST00000517275 RSAD2Q8WXG1 361 aa4.33□□□□□ -1.72
RNU6-840P-201ENST00000517275 JADE3Q92613 823 aa4.33□□□□□ -1.72
RNU6-840P-201ENST00000517275 TTC17Q96AE7 1141 aa4.33□□□□□ -1.72
RNU6-840P-201ENST00000517275 E2F7Q96AV8 911 aa4.33□□□□□ -1.72
RNU6-840P-201ENST00000517275 FOXRED1Q96CU9 486 aaPredicted RBP4.33□□□□□ -1.72
RNU6-840P-201ENST00000517275 TAAR9Q96RI9 348 aa4.33□□□□□ -1.72
RNU6-840P-201ENST00000517275 CD244Q9BZW8 370 aa4.33□□□□□ -1.72
RNU6-840P-201ENST00000517275 CSRNP2Q9H175 543 aa4.33□□□□□ -1.72
RNU6-840P-201ENST00000517275 TNFRSF12AQ9NP84 129 aa4.33□□□□□ -1.72
RNU6-840P-201ENST00000517275 BSDC1Q9NW68 430 aaPredicted RBP4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms