RNA–Protein interactions for RNA: ENST00000516330.1

SCARNA18.1-201, small Cajal body-specific RNA 18, humanhuman

BASIC

Gene SCARNA18, Length 83 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA18.1-201ENST00000516330 HBP1O60381 514 aa6.8□□□□□ -1.32
SCARNA18.1-201ENST00000516330 NBNO60934 754 aa6.8□□□□□ -1.32
SCARNA18.1-201ENST00000516330 RSPH10BP0C881 870 aa6.8□□□□□ -1.32
SCARNA18.1-201ENST00000516330 ACRP10323 421 aa6.8□□□□□ -1.32
SCARNA18.1-201ENST00000516330 FOSL2P15408 326 aa6.8□□□□□ -1.32
SCARNA18.1-201ENST00000516330 CYP3A7P24462 503 aa6.8□□□□□ -1.32
SCARNA18.1-201ENST00000516330 STAT5BP51692 787 aa6.8□□□□□ -1.32
SCARNA18.1-201ENST00000516330 AK2P54819 239 aa6.8□□□□□ -1.32
SCARNA18.1-201ENST00000516330 CHMP4BP1P59074 171 aa6.8□□□□□ -1.32
SCARNA18.1-201ENST00000516330 CCT2P78371 535 aaKnown RBP6.8□□□□□ -1.32
SCARNA18.1-201ENST00000516330 SP4Q02446 784 aa6.8□□□□□ -1.32
SCARNA18.1-201ENST00000516330 ITGB3BPQ13352 177 aaPredicted RBP6.8□□□□□ -1.32
SCARNA18.1-201ENST00000516330 IKBKEQ14164 716 aa6.8□□□□□ -1.32
SCARNA18.1-201ENST00000516330 NONOQ15233 471 aaKnown RBP eCLIP6.8□□□□□ -1.32
SCARNA18.1-201ENST00000516330 GRIK4Q16099 956 aa6.8□□□□□ -1.32
SCARNA18.1-201ENST00000516330 Q4G0T1 1027 aa6.8□□□□□ -1.32
SCARNA18.1-201ENST00000516330 PLEKHG4Q58EX7 1191 aa6.8□□□□□ -1.32
SCARNA18.1-201ENST00000516330 ODR4Q5SWX8 454 aa6.8□□□□□ -1.32
SCARNA18.1-201ENST00000516330 ZNF618Q5T7W0 954 aa6.8□□□□□ -1.32
SCARNA18.1-201ENST00000516330 JAKMIP3Q5VZ66 844 aa6.8□□□□□ -1.32
SCARNA18.1-201ENST00000516330 PPP4R3AQ6IN85 833 aa6.8□□□□□ -1.32
SCARNA18.1-201ENST00000516330 Q7L0L9 218 aa6.8□□□□□ -1.32
SCARNA18.1-201ENST00000516330 DEFB128Q7Z7B8 93 aa6.8□□□□□ -1.32
SCARNA18.1-201ENST00000516330 BLIDQ8IZY5 108 aa6.8□□□□□ -1.32
SCARNA18.1-201ENST00000516330 ATP8B4Q8TF62 1192 aa6.8□□□□□ -1.32
SCARNA18.1-201ENST00000516330 BBXQ8WY36 941 aaPredicted RBP6.8□□□□□ -1.32
SCARNA18.1-201ENST00000516330 SEPT8Q92599 483 aa6.8□□□□□ -1.32
SCARNA18.1-201ENST00000516330 KAT6AQ92794 2004 aa6.8□□□□□ -1.32
SCARNA18.1-201ENST00000516330 LENG9Q96B70 501 aa6.8□□□□□ -1.32
SCARNA18.1-201ENST00000516330 PGBD1Q96JS3 809 aa6.8□□□□□ -1.32
SCARNA18.1-201ENST00000516330 MBOAT7Q96N66 472 aa6.8□□□□□ -1.32
SCARNA18.1-201ENST00000516330 SAMD11Q96NU1 681 aa6.8□□□□□ -1.32
SCARNA18.1-201ENST00000516330 ZNF577Q9BSK1 485 aa6.8□□□□□ -1.32
SCARNA18.1-201ENST00000516330 PHF20Q9BVI0 1012 aa6.8□□□□□ -1.32
SCARNA18.1-201ENST00000516330 FTHL17Q9BXU8 183 aa6.8□□□□□ -1.32
SCARNA18.1-201ENST00000516330 FTOQ9C0B1 505 aaKnown RBP eCLIP6.8□□□□□ -1.32
SCARNA18.1-201ENST00000516330 SEMA6BQ9H3T3 888 aa6.8□□□□□ -1.32
SCARNA18.1-201ENST00000516330 UPF2Q9HAU5 1272 aaKnown RBP6.8□□□□□ -1.32
SCARNA18.1-201ENST00000516330 NCOA5Q9HCD5 579 aaKnown RBP6.8□□□□□ -1.32
SCARNA18.1-201ENST00000516330 RNF216Q9NWF9 866 aaPredicted RBP6.8□□□□□ -1.32
SCARNA18.1-201ENST00000516330 CXXC1Q9P0U4 656 aaPredicted RBP6.8□□□□□ -1.32
SCARNA18.1-201ENST00000516330 TRPC6Q9Y210 931 aa6.8□□□□□ -1.32
SCARNA18.1-201ENST00000516330 COL6A3P12111 3177 aa6.79□□□□□ -1.32
SCARNA18.1-201ENST00000516330 TRIP12Q14669 1992 aaPredicted RBP6.79□□□□□ -1.32
SCARNA18.1-201ENST00000516330 POTEB3A0JP26 581 aa6.79□□□□□ -1.32
SCARNA18.1-201ENST00000516330 TBX3O15119 743 aa6.79□□□□□ -1.32
SCARNA18.1-201ENST00000516330 DKC1O60832 514 aaKnown RBP eCLIP6.79□□□□□ -1.321e-323■■■□□ 16.8
SCARNA18.1-201ENST00000516330 GJB5O95377 273 aa6.79□□□□□ -1.32
SCARNA18.1-201ENST00000516330 AMHP03971 560 aa6.79□□□□□ -1.32
SCARNA18.1-201ENST00000516330 PSAPP07602 524 aa6.79□□□□□ -1.32
SCARNA18.1-201ENST00000516330 ARP10275 920 aa6.79□□□□□ -1.32
SCARNA18.1-201ENST00000516330 THPOP40225 353 aa6.79□□□□□ -1.32
SCARNA18.1-201ENST00000516330 HMGN5P82970 282 aaKnown RBP6.79□□□□□ -1.32
SCARNA18.1-201ENST00000516330 MGAT3Q09327 533 aa6.79□□□□□ -1.32
SCARNA18.1-201ENST00000516330 ORC2Q13416 577 aaPredicted RBP6.79□□□□□ -1.32
SCARNA18.1-201ENST00000516330 NPY5RQ15761 445 aa6.79□□□□□ -1.32
SCARNA18.1-201ENST00000516330 PRR16Q569H4 304 aa6.79□□□□□ -1.32
SCARNA18.1-201ENST00000516330 UTP14CQ5TAP6 766 aaKnown RBP6.79□□□□□ -1.32
SCARNA18.1-201ENST00000516330 IER5Q5VY09 327 aa6.79□□□□□ -1.32
SCARNA18.1-201ENST00000516330 POTEBQ6S5H4 581 aa6.79□□□□□ -1.32
SCARNA18.1-201ENST00000516330 ABHD15Q6UXT9 468 aa6.79□□□□□ -1.32
SCARNA18.1-201ENST00000516330 TSHZ1Q6ZSZ6 1077 aa6.79□□□□□ -1.32
SCARNA18.1-201ENST00000516330 NEK8Q86SG6 692 aa6.79□□□□□ -1.32
SCARNA18.1-201ENST00000516330 HERC6Q8IVU3 1022 aa6.79□□□□□ -1.32
SCARNA18.1-201ENST00000516330 CCDC60Q8IWA6 550 aaPredicted RBP6.79□□□□□ -1.32
SCARNA18.1-201ENST00000516330 NME8Q8N427 588 aa6.79□□□□□ -1.32
SCARNA18.1-201ENST00000516330 TBCKQ8TEA7 893 aa6.79□□□□□ -1.32
SCARNA18.1-201ENST00000516330 RSPH1Q8WYR4 309 aa6.79□□□□□ -1.32
SCARNA18.1-201ENST00000516330 WNT8BQ93098 351 aa6.79□□□□□ -1.32
SCARNA18.1-201ENST00000516330 ZFP91Q96JP5 570 aaPredicted RBP6.79□□□□□ -1.32
SCARNA18.1-201ENST00000516330 PCYT2Q99447 389 aa6.79□□□□□ -1.32
SCARNA18.1-201ENST00000516330 CDX2Q99626 313 aaPredicted RBP6.79□□□□□ -1.32
SCARNA18.1-201ENST00000516330 TEKT3Q9BXF9 490 aa6.79□□□□□ -1.32
SCARNA18.1-201ENST00000516330 IFIH1Q9BYX4 1025 aaKnown RBP6.79□□□□□ -1.32
SCARNA18.1-201ENST00000516330 ZNF302Q9NR11 478 aa6.79□□□□□ -1.32
SCARNA18.1-201ENST00000516330 SH2B1Q9NRF2 756 aaPredicted RBP6.79□□□□□ -1.32
SCARNA18.1-201ENST00000516330 SETD4Q9NVD3 440 aa6.79□□□□□ -1.32
SCARNA18.1-201ENST00000516330 TMEM260Q9NX78 707 aa6.79□□□□□ -1.32
SCARNA18.1-201ENST00000516330 RWDD3Q9Y3V2 267 aa6.79□□□□□ -1.32
SCARNA18.1-201ENST00000516330 PPME1Q9Y570 386 aa6.79□□□□□ -1.32
SCARNA18.1-201ENST00000516330 PCDHA10Q9Y5I2 948 aa6.79□□□□□ -1.32
SCARNA18.1-201ENST00000516330 MAFBQ9Y5Q3 323 aaPredicted RBP6.79□□□□□ -1.32
SCARNA18.1-201ENST00000516330 TET1Q8NFU7 2136 aa6.79□□□□□ -1.32
SCARNA18.1-201ENST00000516330 MYH9P35579 1960 aaKnown RBP6.78□□□□□ -1.32
SCARNA18.1-201ENST00000516330 WDR81Q562E7 1941 aa6.78□□□□□ -1.32
SCARNA18.1-201ENST00000516330 CCDC194A0A1B0GVG4 234 aa6.78□□□□□ -1.32
SCARNA18.1-201ENST00000516330 BACH1O14867 736 aa6.78□□□□□ -1.32
SCARNA18.1-201ENST00000516330 MAGEB2O15479 319 aa6.78□□□□□ -1.32
SCARNA18.1-201ENST00000516330 DHX15O43143 795 aaKnown RBP6.78□□□□□ -1.32
SCARNA18.1-201ENST00000516330 TLL1O43897 1013 aa6.78□□□□□ -1.32
SCARNA18.1-201ENST00000516330 SORBS3O60504 671 aa6.78□□□□□ -1.32
SCARNA18.1-201ENST00000516330 GAS7O60861 476 aa6.78□□□□□ -1.32
SCARNA18.1-201ENST00000516330 CCNE2O96020 404 aa6.78□□□□□ -1.32
SCARNA18.1-201ENST00000516330 INSRRP14616 1297 aa6.78□□□□□ -1.32
SCARNA18.1-201ENST00000516330 POU3F3P20264 500 aaPredicted RBP6.78□□□□□ -1.32
SCARNA18.1-201ENST00000516330 MARK3P27448 753 aa6.78□□□□□ -1.32
SCARNA18.1-201ENST00000516330 RBM25P49756 843 aaKnown RBP6.78□□□□□ -1.32
SCARNA18.1-201ENST00000516330 MRPS6P82932 125 aaKnown RBP6.78□□□□□ -1.32
SCARNA18.1-201ENST00000516330 STK3Q13188 491 aa6.78□□□□□ -1.32
SCARNA18.1-201ENST00000516330 TRIM29Q14134 588 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms