RNA–Protein interactions for RNA: ENST00000515609.1

TPM3-222, Transcript of tropomyosin 3, humanhuman

TSL 3

Gene TPM3, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-222ENST00000515609 LRRC63Q05C16 580 aa10.54□□□□□ -0.72
TPM3-222ENST00000515609 NOGQ13253 232 aa10.54□□□□□ -0.72
TPM3-222ENST00000515609 HSP90AA2PQ14568 343 aaPredicted RBP10.54□□□□□ -0.72
TPM3-222ENST00000515609 TTLL4Q14679 1199 aa10.54□□□□□ -0.72
TPM3-222ENST00000515609 FAM26FQ5R3K3 315 aa10.54□□□□□ -0.72
TPM3-222ENST00000515609 PPP4R3CPQ6ZMV5 832 aa10.54□□□□□ -0.72
TPM3-222ENST00000515609 PLEKHH3Q7Z736 793 aa10.54□□□□□ -0.72
TPM3-222ENST00000515609 DHX40Q8IX18 779 aaKnown RBP10.54□□□□□ -0.72
TPM3-222ENST00000515609 DRC7Q8IY82 874 aa10.54□□□□□ -0.72
TPM3-222ENST00000515609 ADSSL1Q8N142 457 aa10.54□□□□□ -0.72
TPM3-222ENST00000515609 MORC4Q8TE76 937 aa10.54□□□□□ -0.72
TPM3-222ENST00000515609 SCFD2Q8WU76 684 aa10.54□□□□□ -0.72
TPM3-222ENST00000515609 DYDC2Q96IM9 177 aa10.54□□□□□ -0.72
TPM3-222ENST00000515609 PDLIM2Q96JY6 352 aa10.54□□□□□ -0.72
TPM3-222ENST00000515609 MTRQ99707 1265 aa10.54□□□□□ -0.72
TPM3-222ENST00000515609 BHMT2Q9H2M3 363 aa10.54□□□□□ -0.72
TPM3-222ENST00000515609 TXNRD2Q9NNW7 524 aa10.54□□□□□ -0.72
TPM3-222ENST00000515609 VTA1Q9NP79 307 aa10.54□□□□□ -0.72
TPM3-222ENST00000515609 LARSQ9P2J5 1176 aaKnown RBP10.54□□□□□ -0.72
TPM3-222ENST00000515609 LOXHD1Q8IVV2 1947 aa10.54□□□□□ -0.72
TPM3-222ENST00000515609 MYMKA6NI61 221 aa10.53□□□□□ -0.72
TPM3-222ENST00000515609 E9PMD0 336 aa10.53□□□□□ -0.72
TPM3-222ENST00000515609 H0YCG3 227 aa10.53□□□□□ -0.72
TPM3-222ENST00000515609 DDX39AO00148 427 aaKnown RBP10.53□□□□□ -0.72
TPM3-222ENST00000515609 EML1O00423 815 aa10.53□□□□□ -0.72
TPM3-222ENST00000515609 FAM13AO94988 1023 aa10.53□□□□□ -0.72
TPM3-222ENST00000515609 KCNA2P16389 499 aa10.53□□□□□ -0.72
TPM3-222ENST00000515609 CYP11B2P19099 503 aa10.53□□□□□ -0.72
TPM3-222ENST00000515609 GUCY2CP25092 1073 aa10.53□□□□□ -0.72
TPM3-222ENST00000515609 SLC26A2P50443 739 aa10.53□□□□□ -0.72
TPM3-222ENST00000515609 CNTN2Q02246 1040 aa10.53□□□□□ -0.72
TPM3-222ENST00000515609 FMR1Q06787 632 aaKnown RBP eCLIP10.53□□□□□ -0.72
TPM3-222ENST00000515609 MKRN3Q13064 507 aaKnown RBP10.53□□□□□ -0.72
TPM3-222ENST00000515609 ITGB3BPQ13352 177 aaPredicted RBP10.53□□□□□ -0.72
TPM3-222ENST00000515609 HERC4Q5GLZ8 1057 aaPredicted RBP10.53□□□□□ -0.72
TPM3-222ENST00000515609 KLHL10Q6JEL2 608 aa10.53□□□□□ -0.72
TPM3-222ENST00000515609 METTL7BQ6UX53 244 aa10.53□□□□□ -0.72
TPM3-222ENST00000515609 DYMQ7RTS9 669 aa10.53□□□□□ -0.72
TPM3-222ENST00000515609 IFNL1Q8IU54 200 aa10.53□□□□□ -0.72
TPM3-222ENST00000515609 MYOCDQ8IZQ8 938 aa10.53□□□□□ -0.72
TPM3-222ENST00000515609 FAM43AQ8N2R8 423 aa10.53□□□□□ -0.72
TPM3-222ENST00000515609 NELFBQ8WX92 580 aa10.53□□□□□ -0.72
TPM3-222ENST00000515609 SOCS4Q8WXH5 440 aa10.53□□□□□ -0.72
TPM3-222ENST00000515609 FAM167AQ96KS9 214 aa10.53□□□□□ -0.72
TPM3-222ENST00000515609 DRC1Q96MC2 740 aa10.53□□□□□ -0.72
TPM3-222ENST00000515609 NUDT12Q9BQG2 462 aa10.53□□□□□ -0.72
TPM3-222ENST00000515609 AZI2Q9H6S1 392 aa10.53□□□□□ -0.72
TPM3-222ENST00000515609 MLXIPQ9HAP2 919 aa10.53□□□□□ -0.72
TPM3-222ENST00000515609 C17orf75Q9HAS0 396 aa10.53□□□□□ -0.72
TPM3-222ENST00000515609 OLFML3Q9NRN5 406 aa10.53□□□□□ -0.72
TPM3-222ENST00000515609 RGL1Q9NZL6 768 aa10.53□□□□□ -0.72
TPM3-222ENST00000515609 NFE2L3Q9Y4A8 694 aa10.53□□□□□ -0.72
TPM3-222ENST00000515609 SMCHD1A6NHR9 2005 aa10.52□□□□□ -0.73
TPM3-222ENST00000515609 SOWAHBA6NEL2 793 aa10.52□□□□□ -0.73
TPM3-222ENST00000515609 PPP1R3GB7ZBB8 358 aa10.52□□□□□ -0.73
TPM3-222ENST00000515609 NOP56O00567 594 aaKnown RBP10.52□□□□□ -0.73
TPM3-222ENST00000515609 BACH1O14867 736 aa10.52□□□□□ -0.73
TPM3-222ENST00000515609 NKRFO15226 690 aaKnown RBP eCLIP10.52□□□□□ -0.73
TPM3-222ENST00000515609 KLRC4O43908 158 aa10.52□□□□□ -0.73
TPM3-222ENST00000515609 TLR2O60603 784 aa10.52□□□□□ -0.73
TPM3-222ENST00000515609 GNA14O95837 355 aa10.52□□□□□ -0.73
TPM3-222ENST00000515609 MAPTP10636 758 aaKnown RBP10.52□□□□□ -0.73
TPM3-222ENST00000515609 BMP6P22004 513 aa10.52□□□□□ -0.73
TPM3-222ENST00000515609 CCNE1P24864 410 aa10.52□□□□□ -0.73
TPM3-222ENST00000515609 EEF1GP26641 437 aaKnown RBP10.52□□□□□ -0.73
TPM3-222ENST00000515609 ADORA2AP29274 412 aa10.52□□□□□ -0.73
TPM3-222ENST00000515609 YWHABP31946 246 aaKnown RBP10.52□□□□□ -0.73
TPM3-222ENST00000515609 PRCPP42785 496 aa10.52□□□□□ -0.73
TPM3-222ENST00000515609 TM4SF4P48230 202 aa10.52□□□□□ -0.73
TPM3-222ENST00000515609 ACTR2P61160 394 aa10.52□□□□□ -0.73
TPM3-222ENST00000515609 CTTNQ14247 550 aaKnown RBP10.52□□□□□ -0.73
TPM3-222ENST00000515609 Q3C1V9 767 aa10.52□□□□□ -0.73
TPM3-222ENST00000515609 XKR3Q5GH77 459 aa10.52□□□□□ -0.73
TPM3-222ENST00000515609 SEPT14Q6ZU15 432 aa10.52□□□□□ -0.73
TPM3-222ENST00000515609 GPR142Q7Z601 462 aa10.52□□□□□ -0.73
TPM3-222ENST00000515609 MCPH1Q8NEM0 835 aa10.52□□□□□ -0.73
TPM3-222ENST00000515609 GOLGA5Q8TBA6 731 aa10.52□□□□□ -0.73
TPM3-222ENST00000515609 P2RX5Q93086 422 aa10.52□□□□□ -0.73
TPM3-222ENST00000515609 GJA10Q969M2 543 aa10.52□□□□□ -0.73
TPM3-222ENST00000515609 DNAJC19Q96DA6 116 aa10.52□□□□□ -0.73
TPM3-222ENST00000515609 TRIM47Q96LD4 638 aa10.52□□□□□ -0.73
TPM3-222ENST00000515609 JPH2Q9BR39 696 aaPredicted RBP10.52□□□□□ -0.73
TPM3-222ENST00000515609 THAP9Q9H5L6 903 aa10.52□□□□□ -0.73
TPM3-222ENST00000515609 PARVGQ9HBI0 331 aa10.52□□□□□ -0.73
TPM3-222ENST00000515609 NRBP2Q9NSY0 501 aa10.52□□□□□ -0.73
TPM3-222ENST00000515609 PKD2L1Q9P0L9 805 aa10.52□□□□□ -0.73
TPM3-222ENST00000515609 IMPACTQ9P2X3 320 aa10.52□□□□□ -0.73
TPM3-222ENST00000515609 PCDHB13Q9Y5F0 798 aa10.52□□□□□ -0.73
TPM3-222ENST00000515609 UBE4BO95155 1302 aa10.52□□□□□ -0.73
TPM3-222ENST00000515609 SYNGAP1Q96PV0 1343 aa10.52□□□□□ -0.73
TPM3-222ENST00000515609 FRMD3A2A2Y4 597 aa10.51□□□□□ -0.73
TPM3-222ENST00000515609 EIF3DO15371 548 aaKnown RBP eCLIP10.51□□□□□ -0.73
TPM3-222ENST00000515609 GAS2O43903 313 aaKnown RBP10.51□□□□□ -0.73
TPM3-222ENST00000515609 TPM1P09493 284 aa10.51□□□□□ -0.73
TPM3-222ENST00000515609 SUPT20HL2P0C7V6 817 aa10.51□□□□□ -0.73
TPM3-222ENST00000515609 RPL13P26373 211 aaKnown RBP10.51□□□□□ -0.73
TPM3-222ENST00000515609 ZNF75DP51815 510 aa10.51□□□□□ -0.73
TPM3-222ENST00000515609 SMTNP53814 917 aa10.51□□□□□ -0.73
TPM3-222ENST00000515609 UBASH3AP57075 661 aa10.51□□□□□ -0.73
TPM3-222ENST00000515609 GSDMDP57764 484 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms