RNA–Protein interactions for RNA: ENST00000514572.1

RFC1-216, Transcript of replication factor C subunit 1, humanhuman

TSL 2

Gene RFC1, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-216ENST00000514572 ZNF652Q9Y2D9 606 aa6.69□□□□□ -1.34
RFC1-216ENST00000514572 COA3Q9Y2R0 106 aaPredicted RBP6.69□□□□□ -1.34
RFC1-216ENST00000514572 NOC2LQ9Y3T9 749 aaKnown RBP6.69□□□□□ -1.34
RFC1-216ENST00000514572 RWDD3Q9Y3V2 267 aa6.69□□□□□ -1.34
RFC1-216ENST00000514572 MRFAP1Q9Y605 127 aa6.69□□□□□ -1.34
RFC1-216ENST00000514572 KLHL33A6NCF5 533 aa6.68□□□□□ -1.34
RFC1-216ENST00000514572 GOLGA8AA7E2F4 631 aa6.68□□□□□ -1.34
RFC1-216ENST00000514572 GOLGA8BA8MQT2 603 aa6.68□□□□□ -1.34
RFC1-216ENST00000514572 SCDO00767 359 aa6.68□□□□□ -1.34
RFC1-216ENST00000514572 CYP26A1O43174 497 aa6.68□□□□□ -1.34
RFC1-216ENST00000514572 TADA3O75528 432 aa6.68□□□□□ -1.34
RFC1-216ENST00000514572 FUCA1P04066 466 aa6.68□□□□□ -1.34
RFC1-216ENST00000514572 H2AFB1P0C5Y9 115 aa6.68□□□□□ -1.34
RFC1-216ENST00000514572 H2AFB2P0C5Z0 115 aa6.68□□□□□ -1.34
RFC1-216ENST00000514572 ZGLP1P0C6A0 271 aa6.68□□□□□ -1.34
RFC1-216ENST00000514572 FSTP19883 344 aa6.68□□□□□ -1.34
RFC1-216ENST00000514572 CD40P25942 277 aa6.68□□□□□ -1.34
RFC1-216ENST00000514572 SLC6A11P48066 632 aa6.68□□□□□ -1.34
RFC1-216ENST00000514572 PRKCQQ04759 706 aa6.68□□□□□ -1.34
RFC1-216ENST00000514572 KSR2Q6VAB6 950 aa6.68□□□□□ -1.34
RFC1-216ENST00000514572 KCTD1Q719H9 257 aa6.68□□□□□ -1.34
RFC1-216ENST00000514572 ASB11Q8WXH4 323 aa6.68□□□□□ -1.34
RFC1-216ENST00000514572 JADE3Q92613 823 aa6.68□□□□□ -1.34
RFC1-216ENST00000514572 ZNF496Q96IT1 587 aaPredicted RBP6.68□□□□□ -1.34
RFC1-216ENST00000514572 HRASLS5Q96KN8 279 aa6.68□□□□□ -1.34
RFC1-216ENST00000514572 RC3H2Q9HBD1 1191 aaKnown RBP6.68□□□□□ -1.34
RFC1-216ENST00000514572 DDX21Q9NR30 783 aaKnown RBP eCLIP6.68□□□□□ -1.34
RFC1-216ENST00000514572 PIM2Q9P1W9 311 aa6.68□□□□□ -1.34
RFC1-216ENST00000514572 PTPN22Q9Y2R2 807 aa6.68□□□□□ -1.34
RFC1-216ENST00000514572 ATP23Q9Y6H3 246 aa6.68□□□□□ -1.34
RFC1-216ENST00000514572 RASSF10A6NK89 507 aa6.67□□□□□ -1.34
RFC1-216ENST00000514572 FAM90A27PA6NNH2 459 aa6.67□□□□□ -1.34
RFC1-216ENST00000514572 NOTOA8MTQ0 251 aa6.67□□□□□ -1.34
RFC1-216ENST00000514572 C4BPAP04003 597 aaKnown RBP6.67□□□□□ -1.34
RFC1-216ENST00000514572 AGXTP21549 392 aa6.67□□□□□ -1.34
RFC1-216ENST00000514572 ENPP1P22413 925 aa6.67□□□□□ -1.34
RFC1-216ENST00000514572 AKAP5P24588 427 aa6.67□□□□□ -1.34
RFC1-216ENST00000514572 GJA4P35212 333 aa6.67□□□□□ -1.34
RFC1-216ENST00000514572 FSCN1Q16658 493 aaKnown RBP6.67□□□□□ -1.34
RFC1-216ENST00000514572 HSF5Q4G112 596 aaPredicted RBP6.67□□□□□ -1.34
RFC1-216ENST00000514572 EFCAB2Q5VUJ9 269 aa6.67□□□□□ -1.34
RFC1-216ENST00000514572 KCNK18Q7Z418 384 aa6.67□□□□□ -1.34
RFC1-216ENST00000514572 WFDC3Q8IUB2 231 aa6.67□□□□□ -1.34
RFC1-216ENST00000514572 AMOTL1Q8IY63 956 aa6.67□□□□□ -1.34
RFC1-216ENST00000514572 LZTR1Q8N653 840 aa6.67□□□□□ -1.34
RFC1-216ENST00000514572 PJA1Q8NG27 643 aa6.67□□□□□ -1.34
RFC1-216ENST00000514572 TAAR9Q96RI9 348 aa6.67□□□□□ -1.34
RFC1-216ENST00000514572 MPHOSPH6Q99547 160 aaKnown RBP6.67□□□□□ -1.34
RFC1-216ENST00000514572 NMRK2Q9NPI5 230 aa6.67□□□□□ -1.34
RFC1-216ENST00000514572 DDX20Q9UHI6 824 aaKnown RBP6.67□□□□□ -1.34
RFC1-216ENST00000514572 INVSQ9Y283 1065 aa6.67□□□□□ -1.34
RFC1-216ENST00000514572 KRIT1O00522 736 aa6.66□□□□□ -1.34
RFC1-216ENST00000514572 XPOTO43592 962 aaKnown RBP6.66□□□□□ -1.34
RFC1-216ENST00000514572 BUB1BO60566 1050 aaPredicted RBP6.66□□□□□ -1.34
RFC1-216ENST00000514572 USP2O75604 605 aaPredicted RBP6.66□□□□□ -1.34
RFC1-216ENST00000514572 EFEMP2O95967 443 aa6.66□□□□□ -1.34
RFC1-216ENST00000514572 LDHAP00338 332 aaKnown RBP6.66□□□□□ -1.34
RFC1-216ENST00000514572 TMEM253P0C7T8 217 aa6.66□□□□□ -1.34
RFC1-216ENST00000514572 MSL3P1P0C860 447 aa6.66□□□□□ -1.34
RFC1-216ENST00000514572 MVKQ03426 396 aa6.66□□□□□ -1.34
RFC1-216ENST00000514572 DUSP4Q13115 394 aa6.66□□□□□ -1.34
RFC1-216ENST00000514572 MSMPQ1L6U9 139 aa6.66□□□□□ -1.34
RFC1-216ENST00000514572 CXorf67Q86X51 503 aaPredicted RBP6.66□□□□□ -1.34
RFC1-216ENST00000514572 SLC35G2Q8TBE7 412 aa6.66□□□□□ -1.34
RFC1-216ENST00000514572 SEMA4AQ9H3S1 761 aa6.66□□□□□ -1.34
RFC1-216ENST00000514572 SP110Q9HB58 689 aa6.66□□□□□ -1.34
RFC1-216ENST00000514572 LMCD1Q9NZU5 365 aa6.66□□□□□ -1.34
RFC1-216ENST00000514572 ACSL6Q9UKU0 697 aa6.66□□□□□ -1.34
RFC1-216ENST00000514572 VAV3Q9UKW4 847 aa6.66□□□□□ -1.34
RFC1-216ENST00000514572 RB1CC1Q8TDY2 1594 aa6.65□□□□□ -1.34
RFC1-216ENST00000514572 ANO9A1A5B4 782 aa6.65□□□□□ -1.34
RFC1-216ENST00000514572 IL33O95760 270 aa6.65□□□□□ -1.34
RFC1-216ENST00000514572 GLI4P10075 376 aa6.65□□□□□ -1.34
RFC1-216ENST00000514572 PHKG2P15735 406 aa6.65□□□□□ -1.34
RFC1-216ENST00000514572 PTPN1P18031 435 aaKnown RBP6.65□□□□□ -1.34
RFC1-216ENST00000514572 MANFP55145 182 aaKnown RBP6.65□□□□□ -1.34
RFC1-216ENST00000514572 ADKP55263 362 aaKnown RBP6.65□□□□□ -1.34
RFC1-216ENST00000514572 RTP1P59025 263 aa6.65□□□□□ -1.34
RFC1-216ENST00000514572 AOC3Q16853 763 aa6.65□□□□□ -1.34
RFC1-216ENST00000514572 STEAP3Q658P3 488 aa6.65□□□□□ -1.34
RFC1-216ENST00000514572 PPP4R4Q6NUP7 873 aa6.65□□□□□ -1.34
RFC1-216ENST00000514572 TSHZ1Q6ZSZ6 1077 aa6.65□□□□□ -1.34
RFC1-216ENST00000514572 CHST15Q7LFX5 561 aaPredicted RBP6.65□□□□□ -1.34
RFC1-216ENST00000514572 SLC51AQ86UW1 340 aa6.65□□□□□ -1.34
RFC1-216ENST00000514572 PHOSPHO1Q8TCT1 267 aa6.65□□□□□ -1.34
RFC1-216ENST00000514572 TGFBRAP1Q8WUH2 860 aa6.65□□□□□ -1.34
RFC1-216ENST00000514572 RTF1Q92541 710 aaKnown RBP6.65□□□□□ -1.34
RFC1-216ENST00000514572 MISP3Q96FF7 219 aa6.65□□□□□ -1.34
RFC1-216ENST00000514572 SMOC1Q9H4F8 434 aa6.65□□□□□ -1.34
RFC1-216ENST00000514572 PDLIM7Q9NR12 457 aa6.65□□□□□ -1.34
RFC1-216ENST00000514572 IMPACTQ9P2X3 320 aa6.65□□□□□ -1.34
RFC1-216ENST00000514572 MSRAQ9UJ68 235 aa6.65□□□□□ -1.34
RFC1-216ENST00000514572 GPR45Q9Y5Y3 372 aa6.65□□□□□ -1.34
RFC1-216ENST00000514572 C5AR1P21730 350 aa6.64□□□□□ -1.35
RFC1-216ENST00000514572 SRSF2Q01130 221 aaKnown RBP6.64□□□□□ -1.35
RFC1-216ENST00000514572 CHRNA2Q15822 529 aa6.64□□□□□ -1.35
RFC1-216ENST00000514572 LONRF3Q496Y0 759 aa6.64□□□□□ -1.35
RFC1-216ENST00000514572 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.64□□□□□ -1.35
RFC1-216ENST00000514572 RTN4RL1Q86UN2 441 aaPredicted RBP6.64□□□□□ -1.35
RFC1-216ENST00000514572 FAM43AQ8N2R8 423 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms