RNA–Protein interactions for RNA: ENST00000514089.5

SNF8-212, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 571 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-212ENST00000514089 RDM1Q8NG50 284 aa16.36■□□□□ 0.21
SNF8-212ENST00000514089 ATP6V0A1Q93050 837 aa16.36■□□□□ 0.21
SNF8-212ENST00000514089 SETD4Q9NVD3 440 aa16.36■□□□□ 0.21
SNF8-212ENST00000514089 GTF2IRD1Q9UHL9 959 aa16.36■□□□□ 0.21
SNF8-212ENST00000514089 RBBP6Q7Z6E9 1792 aaKnown RBP16.36■□□□□ 0.21
SNF8-212ENST00000514089 HAS3O00219 553 aa16.35■□□□□ 0.21
SNF8-212ENST00000514089 OR52Z1P0C646 297 aa16.35■□□□□ 0.21
SNF8-212ENST00000514089 CYP2C9P11712 490 aa16.35■□□□□ 0.21
SNF8-212ENST00000514089 TECP42680 631 aa16.35■□□□□ 0.21
SNF8-212ENST00000514089 NBR1Q14596 966 aa16.35■□□□□ 0.21
SNF8-212ENST00000514089 FOXD4L5Q5VV16 416 aaPredicted RBP16.35■□□□□ 0.21
SNF8-212ENST00000514089 GDF6Q6KF10 455 aaPredicted RBP16.35■□□□□ 0.21
SNF8-212ENST00000514089 SESTD1Q86VW0 696 aa16.35■□□□□ 0.21
SNF8-212ENST00000514089 CCDC155Q8N6L0 562 aa16.35■□□□□ 0.21
SNF8-212ENST00000514089 FOXD4L4Q8WXT5 416 aaPredicted RBP16.35■□□□□ 0.21
SNF8-212ENST00000514089 HAS1Q92839 578 aa16.35■□□□□ 0.21
SNF8-212ENST00000514089 HIPK3Q9H422 1215 aa16.35■□□□□ 0.21
SNF8-212ENST00000514089 ZSCAN16Q9H4T2 348 aaPredicted RBP16.35■□□□□ 0.21
SNF8-212ENST00000514089 CEP131Q9UPN4 1083 aa16.35■□□□□ 0.21
SNF8-212ENST00000514089 PCDHB6Q9Y5E3 794 aa16.35■□□□□ 0.21
SNF8-212ENST00000514089 EMSYQ7Z589 1322 aa16.35■□□□□ 0.21
SNF8-212ENST00000514089 NRCAMQ92823 1304 aa16.35■□□□□ 0.21
SNF8-212ENST00000514089 BRCA2P51587 3418 aa16.34■□□□□ 0.21
SNF8-212ENST00000514089 RRN3P2A6NIE6 340 aa16.34■□□□□ 0.21
SNF8-212ENST00000514089 HBP1O60381 514 aa16.34■□□□□ 0.21
SNF8-212ENST00000514089 PTGDRQ13258 359 aa16.34■□□□□ 0.21
SNF8-212ENST00000514089 PPP2R5CQ13362 524 aa16.34■□□□□ 0.21
SNF8-212ENST00000514089 BFSP2Q13515 415 aa16.34■□□□□ 0.21
SNF8-212ENST00000514089 SH3RF1Q7Z6J0 888 aa16.34■□□□□ 0.21
SNF8-212ENST00000514089 CCDC60Q8IWA6 550 aaPredicted RBP16.34■□□□□ 0.21
SNF8-212ENST00000514089 ERMNQ8TAM6 284 aa16.34■□□□□ 0.21
SNF8-212ENST00000514089 AFAP1L1Q8TED9 768 aa16.34■□□□□ 0.21
SNF8-212ENST00000514089 FAM167AQ96KS9 214 aa16.34■□□□□ 0.21
SNF8-212ENST00000514089 PCYT2Q99447 389 aa16.34■□□□□ 0.21
SNF8-212ENST00000514089 RAB34Q9BZG1 259 aa16.34■□□□□ 0.21
SNF8-212ENST00000514089 PPP1R12CQ9BZL4 782 aa16.34■□□□□ 0.21
SNF8-212ENST00000514089 PDLIM7Q9NR12 457 aa16.34■□□□□ 0.21
SNF8-212ENST00000514089 LCTP09848 1927 aa16.34■□□□□ 0.21
SNF8-212ENST00000514089 IGKV6D-21A0A0A0MT36 114 aa16.33■□□□□ 0.2
SNF8-212ENST00000514089 TRIM43BA6NCK2 446 aa16.33■□□□□ 0.2
SNF8-212ENST00000514089 DDX11L8A8MPP1 907 aa16.33■□□□□ 0.2
SNF8-212ENST00000514089 LAD1O00515 517 aa16.33■□□□□ 0.2
SNF8-212ENST00000514089 WNT7AO00755 349 aa16.33■□□□□ 0.2
SNF8-212ENST00000514089 CD4P01730 458 aa16.33■□□□□ 0.2
SNF8-212ENST00000514089 INSRRP14616 1297 aa16.33■□□□□ 0.2
SNF8-212ENST00000514089 ANP32AP39687 249 aaKnown RBP16.33■□□□□ 0.2
SNF8-212ENST00000514089 TOB1P50616 345 aaPredicted RBP16.33■□□□□ 0.2
SNF8-212ENST00000514089 PSMC5P62195 406 aa16.33■□□□□ 0.2
SNF8-212ENST00000514089 ZNF200P98182 395 aaPredicted RBP16.33■□□□□ 0.2
SNF8-212ENST00000514089 MDM2Q00987 491 aaPredicted RBP16.33■□□□□ 0.2
SNF8-212ENST00000514089 PLCB4Q15147 1175 aa16.33■□□□□ 0.2
SNF8-212ENST00000514089 EPHA7Q15375 998 aa16.33■□□□□ 0.2
SNF8-212ENST00000514089 GRIK4Q16099 956 aa16.33■□□□□ 0.2
SNF8-212ENST00000514089 DTHD1Q6ZMT9 781 aa16.33■□□□□ 0.2
SNF8-212ENST00000514089 TPH2Q8IWU9 490 aa16.33■□□□□ 0.2
SNF8-212ENST00000514089 TMEM199Q8N511 208 aa16.33■□□□□ 0.2
SNF8-212ENST00000514089 BANK1Q8NDB2 785 aa16.33■□□□□ 0.2
SNF8-212ENST00000514089 ATP8B4Q8TF62 1192 aa16.33■□□□□ 0.2
SNF8-212ENST00000514089 TRIM43Q96BQ3 446 aaPredicted RBP16.33■□□□□ 0.2
SNF8-212ENST00000514089 MTMR9Q96QG7 549 aa16.33■□□□□ 0.2
SNF8-212ENST00000514089 TMEM60Q9H2L4 133 aa16.33■□□□□ 0.2
SNF8-212ENST00000514089 VAV3Q9UKW4 847 aa16.33■□□□□ 0.2
SNF8-212ENST00000514089 MTMR6Q9Y217 621 aa16.33■□□□□ 0.2
SNF8-212ENST00000514089 MAFBQ9Y5Q3 323 aaPredicted RBP16.33■□□□□ 0.2
SNF8-212ENST00000514089 MCM3APO60318 1980 aa16.33■□□□□ 0.2
SNF8-212ENST00000514089 KIAA0355O15063 1070 aa16.32■□□□□ 0.2
SNF8-212ENST00000514089 TIMP1P01033 207 aa16.32■□□□□ 0.2
SNF8-212ENST00000514089 P4HBP07237 508 aaKnown RBP16.32■□□□□ 0.2
SNF8-212ENST00000514089 QARSP47897 775 aaKnown RBP16.32■□□□□ 0.2
SNF8-212ENST00000514089 PTK7Q13308 1070 aa16.32■□□□□ 0.2
SNF8-212ENST00000514089 RSPH3Q86UC2 560 aa16.32■□□□□ 0.2
SNF8-212ENST00000514089 BBXQ8WY36 941 aaPredicted RBP16.32■□□□□ 0.2
SNF8-212ENST00000514089 BADQ92934 168 aa16.32■□□□□ 0.2
SNF8-212ENST00000514089 EML1O00423 815 aa16.31■□□□□ 0.2
SNF8-212ENST00000514089 TREHO43280 583 aa16.31■□□□□ 0.2
SNF8-212ENST00000514089 BMP15O95972 392 aa16.31■□□□□ 0.2
SNF8-212ENST00000514089 OATP04181 439 aa16.31■□□□□ 0.2
SNF8-212ENST00000514089 CYP2C18P33260 490 aa16.31■□□□□ 0.2
SNF8-212ENST00000514089 THPOP40225 353 aa16.31■□□□□ 0.2
SNF8-212ENST00000514089 CCL23P55773 120 aa16.31■□□□□ 0.2
SNF8-212ENST00000514089 ZNF484Q5JVG2 852 aa16.31■□□□□ 0.2
SNF8-212ENST00000514089 OTUD6AQ7L8S5 288 aa16.31■□□□□ 0.2
SNF8-212ENST00000514089 CCDC43Q96MW1 224 aaKnown RBP16.31■□□□□ 0.2
SNF8-212ENST00000514089 SEPT9Q9UHD8 586 aaPredicted RBP16.31■□□□□ 0.2
SNF8-212ENST00000514089 TUBE1Q9UJT0 475 aa16.31■□□□□ 0.2
SNF8-212ENST00000514089 STK24Q9Y6E0 443 aa16.31■□□□□ 0.2
SNF8-212ENST00000514089 LRRC37A2A6NM11 1700 aa16.31■□□□□ 0.2
SNF8-212ENST00000514089 PRKCEQ02156 737 aa16.3■□□□□ 0.2
SNF8-212ENST00000514089 CYP4A11Q02928 519 aa16.3■□□□□ 0.2
SNF8-212ENST00000514089 CEBPZQ03701 1054 aaKnown RBP16.3■□□□□ 0.2
SNF8-212ENST00000514089 CTTNQ14247 550 aaKnown RBP16.3■□□□□ 0.2
SNF8-212ENST00000514089 XKR3Q5GH77 459 aa16.3■□□□□ 0.2
SNF8-212ENST00000514089 PRPF38BQ5VTL8 546 aaKnown RBP16.3■□□□□ 0.2
SNF8-212ENST00000514089 TAF2Q6P1X5 1199 aa16.3■□□□□ 0.2
SNF8-212ENST00000514089 METTL13Q8N6R0 699 aa16.3■□□□□ 0.2
SNF8-212ENST00000514089 CAGE1Q8TC20 777 aa16.3■□□□□ 0.2
SNF8-212ENST00000514089 LMBR1Q8WVP7 490 aa16.3■□□□□ 0.2
SNF8-212ENST00000514089 DYDC2Q96IM9 177 aa16.3■□□□□ 0.2
SNF8-212ENST00000514089 ZNF396Q96N95 335 aaPredicted RBP16.3■□□□□ 0.2
SNF8-212ENST00000514089 EIF2AK1Q9BQI3 630 aaKnown RBP16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms