RNA–Protein interactions for RNA: ENST00000513525.1

CCL28-203, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best) BASIC

Gene CCL28, Length 1,518 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-203ENST00000513525 PSTPIP2Q9H939 334 aa11.27□□□□□ -0.61
CCL28-203ENST00000513525 NOP56O00567 594 aaKnown RBP11.26□□□□□ -0.61
CCL28-203ENST00000513525 SORBS3O60504 671 aa11.26□□□□□ -0.61
CCL28-203ENST00000513525 HMGB1P09429 215 aaKnown RBP11.26□□□□□ -0.61
CCL28-203ENST00000513525 RABGGTBP53611 331 aa11.26□□□□□ -0.61
CCL28-203ENST00000513525 HIC1Q14526 733 aa11.26□□□□□ -0.61
CCL28-203ENST00000513525 ADCK5Q3MIX3 580 aa11.26□□□□□ -0.61
CCL28-203ENST00000513525 PPP2R2DQ66LE6 453 aa11.26□□□□□ -0.61
CCL28-203ENST00000513525 CNKSR3Q6P9H4 555 aa11.26□□□□□ -0.61
CCL28-203ENST00000513525 TRAF7Q6Q0C0 670 aa11.26□□□□□ -0.61
CCL28-203ENST00000513525 CYFIP1Q7L576 1253 aa11.26□□□□□ -0.61
CCL28-203ENST00000513525 NLRX1Q86UT6 975 aa11.26□□□□□ -0.61
CCL28-203ENST00000513525 SERINC5Q86VE9 423 aa11.26□□□□□ -0.61
CCL28-203ENST00000513525 RAB11FIP4Q86YS3 637 aa11.26□□□□□ -0.61
CCL28-203ENST00000513525 CDHR1Q96JP9 859 aa11.26□□□□□ -0.61
CCL28-203ENST00000513525 GPR20Q99678 358 aa11.26□□□□□ -0.61
CCL28-203ENST00000513525 UPF3BQ9BZI7 483 aaKnown RBP11.26□□□□□ -0.61
CCL28-203ENST00000513525 BCAS3Q9H6U6 928 aa11.26□□□□□ -0.61
CCL28-203ENST00000513525 RTEL1Q9NZ71 1219 aa11.26□□□□□ -0.61
CCL28-203ENST00000513525 hCG_1984214I3L0E3 225 aa11.25□□□□□ -0.61
CCL28-203ENST00000513525 ZBTB43O43298 467 aa11.25□□□□□ -0.61
CCL28-203ENST00000513525 NBNO60934 754 aa11.25□□□□□ -0.61
CCL28-203ENST00000513525 FUT2Q10981 343 aa11.25□□□□□ -0.61
CCL28-203ENST00000513525 PPP1R18Q6NYC8 613 aa11.25□□□□□ -0.61
CCL28-203ENST00000513525 Q6ZNB5 142 aa11.25□□□□□ -0.61
CCL28-203ENST00000513525 CCDC82Q8N4S0 544 aa11.25□□□□□ -0.61
CCL28-203ENST00000513525 ZNF713Q8N859 430 aaPredicted RBP11.25□□□□□ -0.61
CCL28-203ENST00000513525 WNT8BQ93098 351 aa11.25□□□□□ -0.61
CCL28-203ENST00000513525 BRPF3Q9ULD4 1205 aa11.25□□□□□ -0.61
CCL28-203ENST00000513525 LIMCH1Q9UPQ0 1083 aa11.25□□□□□ -0.61
CCL28-203ENST00000513525 CYP46A1Q9Y6A2 500 aa11.25□□□□□ -0.61
CCL28-203ENST00000513525 NCOR1O75376 2440 aa11.25□□□□□ -0.61
CCL28-203ENST00000513525 EMSYQ7Z589 1322 aa11.25□□□□□ -0.61
CCL28-203ENST00000513525 ATG2AQ2TAZ0 1938 aa11.25□□□□□ -0.61
CCL28-203ENST00000513525 hCG_1642624A0A1W2PR95 340 aa11.25□□□□□ -0.61
CCL28-203ENST00000513525 C17orf102A2RUQ5 167 aa11.25□□□□□ -0.61
CCL28-203ENST00000513525 SPDYE3A6NKU9 549 aa11.25□□□□□ -0.61
CCL28-203ENST00000513525 MAFGO15525 162 aa11.25□□□□□ -0.61
CCL28-203ENST00000513525 EFCAB14O75071 495 aa11.25□□□□□ -0.61
CCL28-203ENST00000513525 SMIM10L2AP0DMW4 78 aa11.25□□□□□ -0.61
CCL28-203ENST00000513525 SMIM10L2BP0DMW5 78 aa11.25□□□□□ -0.61
CCL28-203ENST00000513525 MYOGP15173 224 aa11.25□□□□□ -0.61
CCL28-203ENST00000513525 KCNA2P16389 499 aa11.25□□□□□ -0.61
CCL28-203ENST00000513525 WDR5P61964 334 aaKnown RBP11.25□□□□□ -0.61
CCL28-203ENST00000513525 ZNF200P98182 395 aaPredicted RBP11.25□□□□□ -0.61
CCL28-203ENST00000513525 ADGRE1Q14246 886 aa11.25□□□□□ -0.61
CCL28-203ENST00000513525 UBE2SQ16763 222 aa11.25□□□□□ -0.61
CCL28-203ENST00000513525 RTN1Q16799 776 aa11.25□□□□□ -0.61
CCL28-203ENST00000513525 ZNF618Q5T7W0 954 aa11.25□□□□□ -0.61
CCL28-203ENST00000513525 WWC2Q6AWC2 1192 aa11.25□□□□□ -0.61
CCL28-203ENST00000513525 HEATR3Q7Z4Q2 680 aa11.25□□□□□ -0.61
CCL28-203ENST00000513525 HERC6Q8IVU3 1022 aa11.25□□□□□ -0.61
CCL28-203ENST00000513525 USP38Q8NB14 1042 aa11.25□□□□□ -0.61
CCL28-203ENST00000513525 ZSCAN31Q96LW9 406 aaPredicted RBP11.25□□□□□ -0.61
CCL28-203ENST00000513525 TCEANC2Q96MN5 208 aa11.25□□□□□ -0.61
CCL28-203ENST00000513525 JAKMIP1Q96N16 626 aaKnown RBP11.25□□□□□ -0.61
CCL28-203ENST00000513525 COL25A1Q9BXS0 654 aaPredicted RBP11.25□□□□□ -0.61
CCL28-203ENST00000513525 RNPEPQ9H4A4 650 aa11.25□□□□□ -0.61
CCL28-203ENST00000513525 EHMT1Q9H9B1 1298 aa11.25□□□□□ -0.61
CCL28-203ENST00000513525 ZNF215Q9UL58 517 aaPredicted RBP11.25□□□□□ -0.61
CCL28-203ENST00000513525 PCDHA6Q9UN73 950 aa11.25□□□□□ -0.61
CCL28-203ENST00000513525 PCDHA8Q9Y5H6 950 aa11.25□□□□□ -0.61
CCL28-203ENST00000513525 UBIAD1Q9Y5Z9 338 aa11.25□□□□□ -0.61
CCL28-203ENST00000513525 NID2Q14112 1375 aa11.24□□□□□ -0.61
CCL28-203ENST00000513525 COL4A6Q14031 1691 aa11.24□□□□□ -0.61
CCL28-203ENST00000513525 MUC3AQ02505 3323 aa11.24□□□□□ -0.61
CCL28-203ENST00000513525 ABHD14A-ACY1A0A1B0GW23 586 aa11.24□□□□□ -0.61
CCL28-203ENST00000513525 KIF28PB7ZC32 967 aa11.24□□□□□ -0.61
CCL28-203ENST00000513525 GOLGA6L22H0YM25 854 aa11.24□□□□□ -0.61
CCL28-203ENST00000513525 CAND2O75155 1236 aa11.24□□□□□ -0.61
CCL28-203ENST00000513525 CA3P07451 260 aa11.24□□□□□ -0.61
CCL28-203ENST00000513525 ITGB5P18084 799 aa11.24□□□□□ -0.61
CCL28-203ENST00000513525 KCNJ6P48051 423 aa11.24□□□□□ -0.61
CCL28-203ENST00000513525 ADAM17P78536 824 aa11.24□□□□□ -0.61
CCL28-203ENST00000513525 MBTPS1Q14703 1052 aa11.24□□□□□ -0.61
CCL28-203ENST00000513525 SKOR2Q2VWA4 1001 aaPredicted RBP11.24□□□□□ -0.61
CCL28-203ENST00000513525 RUFY3Q7L099 469 aa11.24□□□□□ -0.61
CCL28-203ENST00000513525 FBXL16Q8N461 479 aa11.24□□□□□ -0.61
CCL28-203ENST00000513525 ATP6V0A1Q93050 837 aa11.24□□□□□ -0.61
CCL28-203ENST00000513525 RIC8AQ9NPQ8 531 aa11.24□□□□□ -0.61
CCL28-203ENST00000513525 SH2B1Q9NRF2 756 aaPredicted RBP11.24□□□□□ -0.61
CCL28-203ENST00000513525 PDRG1Q9NUG6 133 aa11.24□□□□□ -0.61
CCL28-203ENST00000513525 TCF20Q9UGU0 1960 aaKnown RBP11.23□□□□□ -0.61
CCL28-203ENST00000513525 KLF18A0A0U1RQI7 1052 aa11.23□□□□□ -0.61
CCL28-203ENST00000513525 GOLGA8AA7E2F4 631 aa11.23□□□□□ -0.61
CCL28-203ENST00000513525 GOLGA8BA8MQT2 603 aa11.23□□□□□ -0.61
CCL28-203ENST00000513525 TREHO43280 583 aa11.23□□□□□ -0.61
CCL28-203ENST00000513525 ATP9AO75110 1047 aa11.23□□□□□ -0.61
CCL28-203ENST00000513525 FOSP01100 380 aaPredicted RBP11.23□□□□□ -0.61
CCL28-203ENST00000513525 GNAT1P11488 350 aa11.23□□□□□ -0.61
CCL28-203ENST00000513525 POU3F3P20264 500 aaPredicted RBP11.23□□□□□ -0.61
CCL28-203ENST00000513525 CDC27P30260 824 aa11.23□□□□□ -0.61
CCL28-203ENST00000513525 TCF7P36402 384 aaPredicted RBP11.23□□□□□ -0.61
CCL28-203ENST00000513525 TTC3P53804 2025 aa11.23□□□□□ -0.61
CCL28-203ENST00000513525 AK2P54819 239 aa11.23□□□□□ -0.61
CCL28-203ENST00000513525 NAPAP54920 295 aa11.23□□□□□ -0.61
CCL28-203ENST00000513525 MTMR1Q13613 665 aa11.23□□□□□ -0.61
CCL28-203ENST00000513525 ANKRD1Q15327 319 aa11.23□□□□□ -0.61
CCL28-203ENST00000513525 TYW1BQ6NUM6 668 aa11.23□□□□□ -0.61
CCL28-203ENST00000513525 TRIM50Q86XT4 487 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms