RNA–Protein interactions for RNA: ENST00000513289.5

CDH9-205, Transcript of cadherin 9, humanhuman

TSL 3

Gene CDH9, Length 556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9-205ENST00000513289 SEPT7Q16181 437 aaKnown RBP6.62□□□□□ -1.35
CDH9-205ENST00000513289 TBC1D9BQ66K14 1250 aa6.62□□□□□ -1.35
CDH9-205ENST00000513289 USP53Q70EK8 1073 aa6.62□□□□□ -1.35
CDH9-205ENST00000513289 FAM214BQ7L5A3 538 aa6.62□□□□□ -1.35
CDH9-205ENST00000513289 CNBD1Q8NA66 436 aa6.62□□□□□ -1.35
CDH9-205ENST00000513289 SMC1BQ8NDV3 1235 aa6.62□□□□□ -1.35
CDH9-205ENST00000513289 DDX1Q92499 740 aaKnown RBP6.62□□□□□ -1.35
CDH9-205ENST00000513289 PTPRN2Q92932 1015 aa6.62□□□□□ -1.35
CDH9-205ENST00000513289 HDAC8Q9BY41 377 aa6.62□□□□□ -1.35
CDH9-205ENST00000513289 KRTAP4-9Q9BYQ8 210 aa6.62□□□□□ -1.35
CDH9-205ENST00000513289 MAP2P11137 1827 aaKnown RBP6.62□□□□□ -1.35
CDH9-205ENST00000513289 TAF1LQ8IZX4 1826 aa6.62□□□□□ -1.35
CDH9-205ENST00000513289 HEG1Q9ULI3 1381 aa6.61□□□□□ -1.35
CDH9-205ENST00000513289 EFCAB14O75071 495 aa6.61□□□□□ -1.35
CDH9-205ENST00000513289 VEGFAP15692 232 aaPredicted RBP6.61□□□□□ -1.35
CDH9-205ENST00000513289 CYP7A1P22680 504 aa6.61□□□□□ -1.35
CDH9-205ENST00000513289 HOXC12P31275 282 aa6.61□□□□□ -1.35
CDH9-205ENST00000513289 IL6STP40189 918 aaPredicted RBP6.61□□□□□ -1.35
CDH9-205ENST00000513289 PCBP1Q15365 356 aaKnown RBP eCLIP6.61□□□□□ -1.35
CDH9-205ENST00000513289 SFRP5Q5T4F7 317 aa6.61□□□□□ -1.35
CDH9-205ENST00000513289 PAOXQ6QHF9 649 aa6.61□□□□□ -1.35
CDH9-205ENST00000513289 BEND4Q6ZU67 534 aa6.61□□□□□ -1.35
CDH9-205ENST00000513289 NOL8Q76FK4 1167 aaKnown RBP6.61□□□□□ -1.35
CDH9-205ENST00000513289 MCM10Q7L590 875 aa6.61□□□□□ -1.35
CDH9-205ENST00000513289 TXNRD3Q86VQ6 643 aa6.61□□□□□ -1.35
CDH9-205ENST00000513289 PPM1KQ8N3J5 372 aa6.61□□□□□ -1.35
CDH9-205ENST00000513289 KREMEN2Q8NCW0 462 aa6.61□□□□□ -1.35
CDH9-205ENST00000513289 LEO1Q8WVC0 666 aaPredicted RBP6.61□□□□□ -1.35
CDH9-205ENST00000513289 JDP2Q8WYK2 163 aa6.61□□□□□ -1.35
CDH9-205ENST00000513289 GATA6Q92908 595 aa6.61□□□□□ -1.35
CDH9-205ENST00000513289 PHACTR3Q96KR7 559 aa6.61□□□□□ -1.35
CDH9-205ENST00000513289 BRIP1Q9BX63 1249 aa6.61□□□□□ -1.35
CDH9-205ENST00000513289 CYP26B1Q9NR63 512 aa6.61□□□□□ -1.35
CDH9-205ENST00000513289 MCM8Q9UJA3 840 aa6.61□□□□□ -1.35
CDH9-205ENST00000513289 SF3B6Q9Y3B4 125 aaKnown RBP6.61□□□□□ -1.35
CDH9-205ENST00000513289 C4AP0C0L4 1744 aa6.61□□□□□ -1.35
CDH9-205ENST00000513289 KCPQ6ZWJ8 1503 aa6.6□□□□□ -1.35
CDH9-205ENST00000513289 CARMIL3Q8ND23 1372 aa6.6□□□□□ -1.35
CDH9-205ENST00000513289 GLTPD2A6NH11 291 aa6.6□□□□□ -1.35
CDH9-205ENST00000513289 KCNQ3O43525 872 aa6.6□□□□□ -1.35
CDH9-205ENST00000513289 OPA1O60313 960 aa6.6□□□□□ -1.35
CDH9-205ENST00000513289 KPNA6O60684 536 aa6.6□□□□□ -1.35
CDH9-205ENST00000513289 EYA4O95677 639 aa6.6□□□□□ -1.35
CDH9-205ENST00000513289 THBDP07204 575 aa6.6□□□□□ -1.35
CDH9-205ENST00000513289 CD3EP07766 207 aa6.6□□□□□ -1.35
CDH9-205ENST00000513289 SNRPA1P09661 255 aaKnown RBP6.6□□□□□ -1.35
CDH9-205ENST00000513289 POU3F2P20265 443 aaPredicted RBP6.6□□□□□ -1.35
CDH9-205ENST00000513289 ADMP35318 185 aa6.6□□□□□ -1.35
CDH9-205ENST00000513289 PIP4K2AP48426 406 aaPredicted RBP6.6□□□□□ -1.35
CDH9-205ENST00000513289 TNK2Q07912 1038 aa6.6□□□□□ -1.35
CDH9-205ENST00000513289 STYK1Q6J9G0 422 aa6.6□□□□□ -1.35
CDH9-205ENST00000513289 PRR5LQ6MZQ0 368 aa6.6□□□□□ -1.35
CDH9-205ENST00000513289 KCNT2Q6UVM3 1135 aa6.6□□□□□ -1.35
CDH9-205ENST00000513289 LHFPL2Q6ZUX7 228 aa6.6□□□□□ -1.35
CDH9-205ENST00000513289 MAMDC2Q7Z304 686 aaPredicted RBP6.6□□□□□ -1.35
CDH9-205ENST00000513289 NBPF5PQ86XG9 351 aaPredicted RBP6.6□□□□□ -1.35
CDH9-205ENST00000513289 RAVER1Q8IY67 606 aaKnown RBP6.6□□□□□ -1.35
CDH9-205ENST00000513289 SHISA5Q8N114 240 aa6.6□□□□□ -1.35
CDH9-205ENST00000513289 DNAJC5GQ8N7S2 189 aa6.6□□□□□ -1.35
CDH9-205ENST00000513289 COX4I2Q96KJ9 171 aa6.6□□□□□ -1.35
CDH9-205ENST00000513289 HEXIM2Q96MH2 286 aaKnown RBP6.6□□□□□ -1.35
CDH9-205ENST00000513289 ZNF652Q9Y2D9 606 aa6.6□□□□□ -1.35
CDH9-205ENST00000513289 NPC1L1Q9UHC9 1359 aa6.59□□□□□ -1.35
CDH9-205ENST00000513289 TCRBV16S1A1N1A0A5B0 115 aa6.59□□□□□ -1.35
CDH9-205ENST00000513289 CAMTA2O94983 1202 aa6.59□□□□□ -1.35
CDH9-205ENST00000513289 CRTAMO95727 393 aa6.59□□□□□ -1.35
CDH9-205ENST00000513289 ASLP04424 464 aa6.59□□□□□ -1.35
CDH9-205ENST00000513289 JMJD7P0C870 316 aa6.59□□□□□ -1.35
CDH9-205ENST00000513289 ZNF865P0CJ78 1059 aaPredicted RBP6.59□□□□□ -1.35
CDH9-205ENST00000513289 IFNGR1P15260 489 aa6.59□□□□□ -1.35
CDH9-205ENST00000513289 ITIH2P19823 946 aa6.59□□□□□ -1.35
CDH9-205ENST00000513289 PPP2R1AP30153 589 aa6.59□□□□□ -1.35
CDH9-205ENST00000513289 IGFALSP35858 605 aa6.59□□□□□ -1.35
CDH9-205ENST00000513289 KIR3DL1P43629 444 aa6.59□□□□□ -1.35
CDH9-205ENST00000513289 NEK4P51957 841 aa6.59□□□□□ -1.35
CDH9-205ENST00000513289 EXOSC10Q01780 885 aaKnown RBP6.59□□□□□ -1.35
CDH9-205ENST00000513289 STRN3Q13033 797 aa6.59□□□□□ -1.35
CDH9-205ENST00000513289 ALYREFQ86V81 257 aaKnown RBP6.59□□□□□ -1.35
CDH9-205ENST00000513289 NGEFQ8N5V2 710 aa6.59□□□□□ -1.35
CDH9-205ENST00000513289 ATL2Q8NHH9 583 aa6.59□□□□□ -1.35
CDH9-205ENST00000513289 NPLOC4Q8TAT6 608 aa6.59□□□□□ -1.35
CDH9-205ENST00000513289 COPS5Q92905 334 aa6.59□□□□□ -1.35
CDH9-205ENST00000513289 CCDC140Q96MF4 163 aa6.59□□□□□ -1.35
CDH9-205ENST00000513289 TAOK3Q9H2K8 898 aa6.59□□□□□ -1.35
CDH9-205ENST00000513289 GPRC5CQ9NQ84 441 aa6.59□□□□□ -1.35
CDH9-205ENST00000513289 CHPF2Q9P2E5 772 aa6.59□□□□□ -1.35
CDH9-205ENST00000513289 KCNH3Q9ULD8 1083 aa6.59□□□□□ -1.35
CDH9-205ENST00000513289 NIP7Q9Y221 180 aaKnown RBP eCLIP6.59□□□□□ -1.35
CDH9-205ENST00000513289 USP16Q9Y5T5 823 aa6.59□□□□□ -1.35
CDH9-205ENST00000513289 CAPN6Q9Y6Q1 641 aa6.59□□□□□ -1.35
CDH9-205ENST00000513289 U3KQE9 123 aa6.59□□□□□ -1.35
CDH9-205ENST00000513289 MRC1P22897 1456 aa6.59□□□□□ -1.36
CDH9-205ENST00000513289 PRAMEF22A3QJZ6 481 aa6.58□□□□□ -1.36
CDH9-205ENST00000513289 DHX15O43143 795 aaKnown RBP6.58□□□□□ -1.36
CDH9-205ENST00000513289 CPP00450 1065 aa6.58□□□□□ -1.36
CDH9-205ENST00000513289 PRELPP51888 382 aa6.58□□□□□ -1.36
CDH9-205ENST00000513289 DCTN1Q14203 1278 aa6.58□□□□□ -1.36
CDH9-205ENST00000513289 ABHD17CQ6PCB6 329 aa6.58□□□□□ -1.36
CDH9-205ENST00000513289 C22orf34Q6ZV56 151 aa6.58□□□□□ -1.36
CDH9-205ENST00000513289 PPIL6Q8IXY8 311 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms