RNA–Protein interactions for RNA: ENST00000513263.1

SKP2-207, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 2

Gene SKP2, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-207ENST00000513263 HMGB1P09429 215 aaKnown RBP12.55□□□□□ -0.4
SKP2-207ENST00000513263 ALADP13716 330 aa12.55□□□□□ -0.4
SKP2-207ENST00000513263 KCNA5P22460 613 aa12.55□□□□□ -0.4
SKP2-207ENST00000513263 CTNNB1P35222 781 aa12.55□□□□□ -0.4
SKP2-207ENST00000513263 KRT32Q14532 448 aa12.55□□□□□ -0.4
SKP2-207ENST00000513263 TCTN1Q2MV58 587 aa12.55□□□□□ -0.4
SKP2-207ENST00000513263 NAALADL2Q58DX5 795 aa12.55□□□□□ -0.4
SKP2-207ENST00000513263 ODR4Q5SWX8 454 aa12.55□□□□□ -0.4
SKP2-207ENST00000513263 MCTP2Q6DN12 878 aa12.55□□□□□ -0.4
SKP2-207ENST00000513263 MICU3Q86XE3 530 aa12.55□□□□□ -0.4
SKP2-207ENST00000513263 SRBD1Q8N5C6 995 aaKnown RBP12.55□□□□□ -0.4
SKP2-207ENST00000513263 ESYT1Q9BSJ8 1104 aa12.55□□□□□ -0.4
SKP2-207ENST00000513263 LSG1Q9H089 658 aaKnown RBP12.55□□□□□ -0.4
SKP2-207ENST00000513263 SLC9A2Q9UBY0 812 aa12.55□□□□□ -0.4
SKP2-207ENST00000513263 UBIAD1Q9Y5Z9 338 aa12.55□□□□□ -0.4
SKP2-207ENST00000513263 TAF6LQ9Y6J9 622 aa12.55□□□□□ -0.4
SKP2-207ENST00000513263 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.54□□□□□ -0.4
SKP2-207ENST00000513263 SLC27A2O14975 620 aa12.54□□□□□ -0.4
SKP2-207ENST00000513263 GPR37L1O60883 481 aa12.54□□□□□ -0.4
SKP2-207ENST00000513263 GHRP10912 638 aa12.54□□□□□ -0.4
SKP2-207ENST00000513263 ITGB5P18084 799 aa12.54□□□□□ -0.4
SKP2-207ENST00000513263 NAPAP54920 295 aa12.54□□□□□ -0.4
SKP2-207ENST00000513263 BMP2KLQ5H9B9 411 aa12.54□□□□□ -0.4
SKP2-207ENST00000513263 CREB3L3Q68CJ9 461 aa12.54□□□□□ -0.4
SKP2-207ENST00000513263 PTCRAQ6ISU1 281 aaPredicted RBP12.54□□□□□ -0.4
SKP2-207ENST00000513263 SPRED2Q7Z698 418 aa12.54□□□□□ -0.4
SKP2-207ENST00000513263 NEK9Q8TD19 979 aa12.54□□□□□ -0.4
SKP2-207ENST00000513263 CCDC12Q8WUD4 166 aaPredicted RBP12.54□□□□□ -0.4
SKP2-207ENST00000513263 CLP1Q92989 425 aaKnown RBP12.54□□□□□ -0.4
SKP2-207ENST00000513263 ZFP91Q96JP5 570 aaPredicted RBP12.54□□□□□ -0.4
SKP2-207ENST00000513263 POP1Q99575 1024 aaKnown RBP12.54□□□□□ -0.4
SKP2-207ENST00000513263 RIC8AQ9NPQ8 531 aa12.54□□□□□ -0.4
SKP2-207ENST00000513263 TCEAL9Q9UHQ7 104 aa12.54□□□□□ -0.4
SKP2-207ENST00000513263 PCDHA6Q9UN73 950 aa12.54□□□□□ -0.4
SKP2-207ENST00000513263 TRPC6Q9Y210 931 aa12.54□□□□□ -0.4
SKP2-207ENST00000513263 PCDHA8Q9Y5H6 950 aa12.54□□□□□ -0.4
SKP2-207ENST00000513263 CCDC196A0A1B0GTZ2 297 aa12.53□□□□□ -0.4
SKP2-207ENST00000513263 STAG3L1P0CL83 205 aa12.53□□□□□ -0.4
SKP2-207ENST00000513263 ADCY7P51828 1080 aa12.53□□□□□ -0.4
SKP2-207ENST00000513263 MRPS6P82932 125 aaKnown RBP12.53□□□□□ -0.4
SKP2-207ENST00000513263 MGAT3Q09327 533 aa12.53□□□□□ -0.4
SKP2-207ENST00000513263 BTG3Q14201 252 aaPredicted RBP12.53□□□□□ -0.4
SKP2-207ENST00000513263 COL19A1Q14993 1142 aa12.53□□□□□ -0.4
SKP2-207ENST00000513263 NECTIN1Q15223 517 aa12.53□□□□□ -0.4
SKP2-207ENST00000513263 RTN1Q16799 776 aa12.53□□□□□ -0.4
SKP2-207ENST00000513263 CEP55Q53EZ4 464 aa12.53□□□□□ -0.4
SKP2-207ENST00000513263 FBXO47Q5MNV8 452 aa12.53□□□□□ -0.4
SKP2-207ENST00000513263 FAM160B1Q5W0V3 765 aa12.53□□□□□ -0.4
SKP2-207ENST00000513263 APOA5Q6Q788 366 aa12.53□□□□□ -0.4
SKP2-207ENST00000513263 NIPA1Q7RTP0 329 aa12.53□□□□□ -0.4
SKP2-207ENST00000513263 PLPPR4Q7Z2D5 763 aa12.53□□□□□ -0.4
SKP2-207ENST00000513263 FAM178BQ8IXR5 827 aa12.53□□□□□ -0.4
SKP2-207ENST00000513263 GJD3Q8N144 294 aa12.53□□□□□ -0.4
SKP2-207ENST00000513263 NME8Q8N427 588 aa12.53□□□□□ -0.4
SKP2-207ENST00000513263 P2RX5Q93086 422 aa12.53□□□□□ -0.4
SKP2-207ENST00000513263 RC3H2Q9HBD1 1191 aaKnown RBP12.53□□□□□ -0.4
SKP2-207ENST00000513263 KCNH7Q9NS40 1196 aa12.53□□□□□ -0.4
SKP2-207ENST00000513263 CNTNAP5Q8WYK1 1306 aa12.53□□□□□ -0.4
SKP2-207ENST00000513263 KDM3AQ9Y4C1 1321 aa12.53□□□□□ -0.4
SKP2-207ENST00000513263 COL1A2P08123 1366 aa12.53□□□□□ -0.4
SKP2-207ENST00000513263 PLXNA4Q9HCM2 1894 aa12.53□□□□□ -0.4
SKP2-207ENST00000513263 GSTTP1A0A1W2PQM5 241 aa12.52□□□□□ -0.41
SKP2-207ENST00000513263 GRXCR2A6NFK2 248 aa12.52□□□□□ -0.41
SKP2-207ENST00000513263 ZBTB43O43298 467 aa12.52□□□□□ -0.41
SKP2-207ENST00000513263 ATP9AO75110 1047 aa12.52□□□□□ -0.41
SKP2-207ENST00000513263 CHRNA1P02708 482 aa12.52□□□□□ -0.41
SKP2-207ENST00000513263 MMP1P03956 469 aa12.52□□□□□ -0.41
SKP2-207ENST00000513263 MARK3P27448 753 aa12.52□□□□□ -0.41
SKP2-207ENST00000513263 SSTR3P32745 418 aaPredicted RBP12.52□□□□□ -0.41
SKP2-207ENST00000513263 SETQ01105 290 aaPredicted RBP12.52□□□□□ -0.41
SKP2-207ENST00000513263 PAK2Q13177 524 aa12.52□□□□□ -0.41
SKP2-207ENST00000513263 LPIN1Q14693 890 aa12.52□□□□□ -0.41
SKP2-207ENST00000513263 UBE2SQ16763 222 aa12.52□□□□□ -0.41
SKP2-207ENST00000513263 NPAS4Q8IUM7 802 aa12.52□□□□□ -0.41
SKP2-207ENST00000513263 CMTR2Q8IYT2 770 aaKnown RBP12.52□□□□□ -0.41
SKP2-207ENST00000513263 ZNF710Q8N1W2 664 aa12.52□□□□□ -0.41
SKP2-207ENST00000513263 MXRA8Q9BRK3 442 aa12.52□□□□□ -0.41
SKP2-207ENST00000513263 UPF3BQ9BZI7 483 aaKnown RBP12.52□□□□□ -0.41
SKP2-207ENST00000513263 BCAS3Q9H6U6 928 aa12.52□□□□□ -0.41
SKP2-207ENST00000513263 PCDHA2Q9Y5H9 948 aa12.52□□□□□ -0.41
SKP2-207ENST00000513263 TRPV2Q9Y5S1 764 aa12.52□□□□□ -0.41
SKP2-207ENST00000513263 CDY2AQ9Y6F7 541 aa12.52□□□□□ -0.41
SKP2-207ENST00000513263 IGSF9BQ9UPX0 1349 aa12.52□□□□□ -0.41
SKP2-207ENST00000513263 SMIM35A0A1B0GVV1 85 aa12.51□□□□□ -0.41
SKP2-207ENST00000513263 PRR33A8MZF0 331 aa12.51□□□□□ -0.41
SKP2-207ENST00000513263 PI4K2BG5E9Z4 385 aa12.51□□□□□ -0.41
SKP2-207ENST00000513263 RXRAP19793 462 aa12.51□□□□□ -0.41
SKP2-207ENST00000513263 BMPR1AP36894 532 aa12.51□□□□□ -0.41
SKP2-207ENST00000513263 SREBF1P36956 1147 aa12.51□□□□□ -0.41
SKP2-207ENST00000513263 STAT5BP51692 787 aa12.51□□□□□ -0.41
SKP2-207ENST00000513263 CSPP1Q1MSJ5 1256 aa12.51□□□□□ -0.41
SKP2-207ENST00000513263 WWC2Q6AWC2 1192 aa12.51□□□□□ -0.41
SKP2-207ENST00000513263 RUFY4Q6ZNE9 571 aa12.51□□□□□ -0.41
SKP2-207ENST00000513263 DHX32Q7L7V1 743 aaKnown RBP12.51□□□□□ -0.41
SKP2-207ENST00000513263 DNAJB3Q8WWF6 145 aa12.51□□□□□ -0.41
SKP2-207ENST00000513263 NEK1Q96PY6 1258 aa12.51□□□□□ -0.41
SKP2-207ENST00000513263 LRFN3Q9BTN0 628 aa12.51□□□□□ -0.41
SKP2-207ENST00000513263 ANO3Q9BYT9 981 aa12.51□□□□□ -0.41
SKP2-207ENST00000513263 ZNF318Q5VUA4 2279 aa12.51□□□□□ -0.41
SKP2-207ENST00000513263 POTEB3A0JP26 581 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms