RNA–Protein interactions for RNA: ENST00000513159.5

PTPN20-227, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-227ENST00000513159 ZBTB42B2RXF5 422 aa11.65□□□□□ -0.54
PTPN20-227ENST00000513159 H3BRB1 525 aa11.65□□□□□ -0.54
PTPN20-227ENST00000513159 KPNA6O60684 536 aa11.65□□□□□ -0.54
PTPN20-227ENST00000513159 SLITRK3O94933 977 aa11.65□□□□□ -0.54
PTPN20-227ENST00000513159 SPATA31C1P0DKV0 1188 aa11.65□□□□□ -0.54
PTPN20-227ENST00000513159 CDC25AP30304 524 aa11.65□□□□□ -0.54
PTPN20-227ENST00000513159 HOXC8P31273 242 aa11.65□□□□□ -0.54
PTPN20-227ENST00000513159 PRPHP41219 470 aa11.65□□□□□ -0.54
PTPN20-227ENST00000513159 TECP42680 631 aa11.65□□□□□ -0.54
PTPN20-227ENST00000513159 RGS19P49795 217 aa11.65□□□□□ -0.54
PTPN20-227ENST00000513159 FXR2P51116 673 aaKnown RBP eCLIP11.65□□□□□ -0.54
PTPN20-227ENST00000513159 ATN1P54259 1190 aaPredicted RBP11.65□□□□□ -0.54
PTPN20-227ENST00000513159 MFSD10Q14728 455 aa11.65□□□□□ -0.54
PTPN20-227ENST00000513159 SLC39A14Q15043 492 aa11.65□□□□□ -0.54
PTPN20-227ENST00000513159 PLCB4Q15147 1175 aa11.65□□□□□ -0.54
PTPN20-227ENST00000513159 EPHA7Q15375 998 aa11.65□□□□□ -0.54
PTPN20-227ENST00000513159 ECM1Q16610 540 aa11.65□□□□□ -0.54
PTPN20-227ENST00000513159 KIAA0753Q2KHM9 967 aa11.65□□□□□ -0.54
PTPN20-227ENST00000513159 PLPPR4Q7Z2D5 763 aa11.65□□□□□ -0.54
PTPN20-227ENST00000513159 MIER3Q7Z3K6 550 aa11.65□□□□□ -0.54
PTPN20-227ENST00000513159 NECAB2Q7Z6G3 386 aa11.65□□□□□ -0.54
PTPN20-227ENST00000513159 SMAP1Q8IYB5 467 aaPredicted RBP11.65□□□□□ -0.54
PTPN20-227ENST00000513159 LINC00301Q8NCQ3 95 aa11.65□□□□□ -0.54
PTPN20-227ENST00000513159 AFAP1L1Q8TED9 768 aa11.65□□□□□ -0.54
PTPN20-227ENST00000513159 LRRC15Q8TF66 581 aa11.65□□□□□ -0.54
PTPN20-227ENST00000513159 MMTAG2Q9BU76 263 aaKnown RBP11.65□□□□□ -0.54
PTPN20-227ENST00000513159 TUT1Q9H6E5 874 aaKnown RBP11.65□□□□□ -0.54
PTPN20-227ENST00000513159 GABBR1Q9UBS5 961 aa11.65□□□□□ -0.54
PTPN20-227ENST00000513159 FBXO2Q9UK22 296 aaPredicted RBP11.65□□□□□ -0.54
PTPN20-227ENST00000513159 SCN5AQ14524 2016 aa11.65□□□□□ -0.54
PTPN20-227ENST00000513159 A0A087WWV3 80 aa11.64□□□□□ -0.55
PTPN20-227ENST00000513159 TMEM150BA6NC51 233 aa11.64□□□□□ -0.55
PTPN20-227ENST00000513159 LAD1O00515 517 aa11.64□□□□□ -0.55
PTPN20-227ENST00000513159 ZBTB39O15060 712 aa11.64□□□□□ -0.55
PTPN20-227ENST00000513159 ZEB2O60315 1214 aa11.64□□□□□ -0.55
PTPN20-227ENST00000513159 MED24O75448 989 aa11.64□□□□□ -0.55
PTPN20-227ENST00000513159 BAG4O95429 457 aaKnown RBP11.64□□□□□ -0.55
PTPN20-227ENST00000513159 MARK3P27448 753 aa11.64□□□□□ -0.55
PTPN20-227ENST00000513159 MARCKSP29966 332 aaPredicted RBP11.64□□□□□ -0.55
PTPN20-227ENST00000513159 STAT5BP51692 787 aa11.64□□□□□ -0.55
PTPN20-227ENST00000513159 JAK3P52333 1124 aa11.64□□□□□ -0.55
PTPN20-227ENST00000513159 ADAM17P78536 824 aa11.64□□□□□ -0.55
PTPN20-227ENST00000513159 ZNF200P98182 395 aaPredicted RBP11.64□□□□□ -0.55
PTPN20-227ENST00000513159 ITGA7Q13683 1181 aa11.64□□□□□ -0.55
PTPN20-227ENST00000513159 C1orf53Q5VUE5 145 aa11.64□□□□□ -0.55
PTPN20-227ENST00000513159 NCAPH2Q6IBW4 605 aa11.64□□□□□ -0.55
PTPN20-227ENST00000513159 MIS18BP1Q6P0N0 1132 aa11.64□□□□□ -0.55
PTPN20-227ENST00000513159 USP49Q70CQ1 688 aa11.64□□□□□ -0.55
PTPN20-227ENST00000513159 BANK1Q8NDB2 785 aa11.64□□□□□ -0.55
PTPN20-227ENST00000513159 RDM1Q8NG50 284 aa11.64□□□□□ -0.55
PTPN20-227ENST00000513159 DYDC2Q96IM9 177 aa11.64□□□□□ -0.55
PTPN20-227ENST00000513159 GLT1D1Q96MS3 346 aa11.64□□□□□ -0.55
PTPN20-227ENST00000513159 CLIC6Q96NY7 704 aa11.64□□□□□ -0.55
PTPN20-227ENST00000513159 CEP89Q96ST8 783 aa11.64□□□□□ -0.55
PTPN20-227ENST00000513159 EIF2AK1Q9BQI3 630 aaKnown RBP11.64□□□□□ -0.55
PTPN20-227ENST00000513159 STARD7Q9NQZ5 370 aa11.64□□□□□ -0.55
PTPN20-227ENST00000513159 ZNF302Q9NR11 478 aa11.64□□□□□ -0.55
PTPN20-227ENST00000513159 HDAC6Q9UBN7 1215 aa11.64□□□□□ -0.55
PTPN20-227ENST00000513159 MORC2Q9Y6X9 1032 aaPredicted RBP11.64□□□□□ -0.55
PTPN20-227ENST00000513159 LTBP2Q14767 1821 aa11.63□□□□□ -0.55
PTPN20-227ENST00000513159 VWA3AA6NCI4 1184 aa11.63□□□□□ -0.55
PTPN20-227ENST00000513159 ARVCFO00192 962 aa11.63□□□□□ -0.55
PTPN20-227ENST00000513159 CAPN15O75808 1086 aa11.63□□□□□ -0.55
PTPN20-227ENST00000513159 CABYRO75952 493 aa11.63□□□□□ -0.55
PTPN20-227ENST00000513159 CD4P01730 458 aa11.63□□□□□ -0.55
PTPN20-227ENST00000513159 PSAPP07602 524 aa11.63□□□□□ -0.55
PTPN20-227ENST00000513159 SFNP31947 248 aa11.63□□□□□ -0.55
PTPN20-227ENST00000513159 NUCB2P80303 420 aa11.63□□□□□ -0.55
PTPN20-227ENST00000513159 CYP4A11Q02928 519 aa11.63□□□□□ -0.55
PTPN20-227ENST00000513159 CTTNQ14247 550 aaKnown RBP11.63□□□□□ -0.55
PTPN20-227ENST00000513159 PDIA5Q14554 519 aa11.63□□□□□ -0.55
PTPN20-227ENST00000513159 TRIM60Q495X7 471 aa11.63□□□□□ -0.55
PTPN20-227ENST00000513159 BRDTQ58F21 947 aaPredicted RBP11.63□□□□□ -0.55
PTPN20-227ENST00000513159 MARCH8Q5T0T0 291 aa11.63□□□□□ -0.55
PTPN20-227ENST00000513159 AXDND1Q5T1B0 1012 aaPredicted RBP11.63□□□□□ -0.55
PTPN20-227ENST00000513159 ARL6IP4Q66PJ3 421 aaKnown RBP11.63□□□□□ -0.55
PTPN20-227ENST00000513159 SESTD1Q86VW0 696 aa11.63□□□□□ -0.55
PTPN20-227ENST00000513159 FAM126BQ8IXS8 530 aa11.63□□□□□ -0.55
PTPN20-227ENST00000513159 ZNF579Q8NAF0 562 aaKnown RBP11.63□□□□□ -0.55
PTPN20-227ENST00000513159 ZBTB10Q96DT7 871 aa11.63□□□□□ -0.55
PTPN20-227ENST00000513159 SMARCAD1Q9H4L7 1026 aa11.63□□□□□ -0.55
PTPN20-227ENST00000513159 RCOR1Q9UKL0 485 aa11.63□□□□□ -0.55
PTPN20-227ENST00000513159 CIZ1Q9ULV3 898 aaPredicted RBP11.63□□□□□ -0.55
PTPN20-227ENST00000513159 MYH11P35749 1972 aa11.63□□□□□ -0.55
PTPN20-227ENST00000513159 A0A0U1RQG5 324 aaPredicted RBP11.62□□□□□ -0.55
PTPN20-227ENST00000513159 BACH1O14867 736 aa11.62□□□□□ -0.55
PTPN20-227ENST00000513159 MARCH6O60337 910 aa11.62□□□□□ -0.55
PTPN20-227ENST00000513159 B4GALT4O60513 344 aa11.62□□□□□ -0.55
PTPN20-227ENST00000513159 SMIM10L2AP0DMW4 78 aa11.62□□□□□ -0.55
PTPN20-227ENST00000513159 SMIM10L2BP0DMW5 78 aa11.62□□□□□ -0.55
PTPN20-227ENST00000513159 RTP1P59025 263 aa11.62□□□□□ -0.55
PTPN20-227ENST00000513159 CHMP4BP1P59074 171 aa11.62□□□□□ -0.55
PTPN20-227ENST00000513159 PRKCEQ02156 737 aa11.62□□□□□ -0.55
PTPN20-227ENST00000513159 TLE2Q04725 743 aa11.62□□□□□ -0.55
PTPN20-227ENST00000513159 GDF6Q6KF10 455 aaPredicted RBP11.62□□□□□ -0.55
PTPN20-227ENST00000513159 PDXDC2PQ6P474 469 aa11.62□□□□□ -0.55
PTPN20-227ENST00000513159 NFRKBQ6P4R8 1299 aa11.62□□□□□ -0.55
PTPN20-227ENST00000513159 DTHD1Q6ZMT9 781 aa11.62□□□□□ -0.55
PTPN20-227ENST00000513159 ANO5Q75V66 913 aa11.62□□□□□ -0.55
PTPN20-227ENST00000513159 ANKRD33Q7Z3H0 272 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms