RNA–Protein interactions for RNA: ENST00000513128.5

GYPB-213, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best) BASIC

Gene GYPB, Length 360 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-213ENST00000513128 ADD3Q9UEY8 706 aaKnown RBP6.89□□□□□ -1.31
GYPB-213ENST00000513128 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.89□□□□□ -1.31
GYPB-213ENST00000513128 TMA7Q9Y2S6 64 aaKnown RBP6.89□□□□□ -1.31
GYPB-213ENST00000513128 SLC4A7Q9Y6M7 1214 aa6.89□□□□□ -1.31
GYPB-213ENST00000513128 NEDD4P46934 1319 aa6.89□□□□□ -1.31
GYPB-213ENST00000513128 MYH7BA7E2Y1 1941 aa6.89□□□□□ -1.31
GYPB-213ENST00000513128 TTC28Q96AY4 2481 aa6.88□□□□□ -1.31
GYPB-213ENST00000513128 CCDC171Q6TFL3 1326 aa6.88□□□□□ -1.31
GYPB-213ENST00000513128 ZBTB39O15060 712 aa6.88□□□□□ -1.31
GYPB-213ENST00000513128 TLL1O43897 1013 aa6.88□□□□□ -1.31
GYPB-213ENST00000513128 CA3P07451 260 aa6.88□□□□□ -1.31
GYPB-213ENST00000513128 CTSHP09668 335 aa6.88□□□□□ -1.31
GYPB-213ENST00000513128 IQCF3P0C7M6 154 aa6.88□□□□□ -1.31
GYPB-213ENST00000513128 TXNP10599 105 aaKnown RBP6.88□□□□□ -1.31
GYPB-213ENST00000513128 ATP2A2P16615 1042 aaKnown RBP6.88□□□□□ -1.31
GYPB-213ENST00000513128 KCNQ1P51787 676 aa6.88□□□□□ -1.31
GYPB-213ENST00000513128 EPHA4P54764 986 aa6.88□□□□□ -1.31
GYPB-213ENST00000513128 RRP1P56182 461 aaKnown RBP6.88□□□□□ -1.31
GYPB-213ENST00000513128 CHMP4BP1P59074 171 aa6.88□□□□□ -1.31
GYPB-213ENST00000513128 RACK1P63244 317 aaKnown RBP6.88□□□□□ -1.31
GYPB-213ENST00000513128 AAMPQ13685 434 aa6.88□□□□□ -1.31
GYPB-213ENST00000513128 TCTN1Q2MV58 587 aa6.88□□□□□ -1.31
GYPB-213ENST00000513128 USH1GQ495M9 461 aa6.88□□□□□ -1.31
GYPB-213ENST00000513128 ZNF394Q53GI3 561 aa6.88□□□□□ -1.31
GYPB-213ENST00000513128 COX20Q5RI15 118 aa6.88□□□□□ -1.31
GYPB-213ENST00000513128 CCDC62Q6P9F0 684 aa6.88□□□□□ -1.31
GYPB-213ENST00000513128 RPUSD2Q8IZ73 545 aaKnown RBP6.88□□□□□ -1.31
GYPB-213ENST00000513128 MICALL1Q8N3F8 863 aa6.88□□□□□ -1.31
GYPB-213ENST00000513128 ALKBH8Q96BT7 664 aaKnown RBP6.88□□□□□ -1.31
GYPB-213ENST00000513128 TAAR1Q96RJ0 339 aa6.88□□□□□ -1.31
GYPB-213ENST00000513128 C1QTNF2Q9BXJ5 285 aa6.88□□□□□ -1.31
GYPB-213ENST00000513128 UBA5Q9GZZ9 404 aa6.88□□□□□ -1.31
GYPB-213ENST00000513128 MTIF3Q9H2K0 278 aaKnown RBP6.88□□□□□ -1.31
GYPB-213ENST00000513128 PCDHA11Q9Y5I1 949 aa6.88□□□□□ -1.31
GYPB-213ENST00000513128 XIRP2A4UGR9 3374 aa6.88□□□□□ -1.31
GYPB-213ENST00000513128 PRRC2BQ5JSZ5 2229 aaKnown RBP6.87□□□□□ -1.31
GYPB-213ENST00000513128 ZMYM6O95789 1325 aa6.87□□□□□ -1.31
GYPB-213ENST00000513128 WDR19Q8NEZ3 1342 aa6.87□□□□□ -1.31
GYPB-213ENST00000513128 LOC102724159A0A0B4J2E5 919 aa6.87□□□□□ -1.31
GYPB-213ENST00000513128 PNMA6FA0A0J9YX94 578 aa6.87□□□□□ -1.31
GYPB-213ENST00000513128 LCHNA4D1U4 455 aa6.87□□□□□ -1.31
GYPB-213ENST00000513128 SUPT20HL2P0C7V6 817 aa6.87□□□□□ -1.31
GYPB-213ENST00000513128 BMP1P13497 986 aa6.87□□□□□ -1.31
GYPB-213ENST00000513128 CPT1AP50416 773 aa6.87□□□□□ -1.31
GYPB-213ENST00000513128 MRPS5P82675 430 aaKnown RBP6.87□□□□□ -1.31
GYPB-213ENST00000513128 TAP1Q03518 808 aa6.87□□□□□ -1.31
GYPB-213ENST00000513128 ARHGAP1Q07960 439 aa6.87□□□□□ -1.31
GYPB-213ENST00000513128 HDAC1Q13547 482 aaPredicted RBP6.87□□□□□ -1.31
GYPB-213ENST00000513128 AGERQ15109 404 aa6.87□□□□□ -1.31
GYPB-213ENST00000513128 PPP2R5BQ15173 497 aa6.87□□□□□ -1.31
GYPB-213ENST00000513128 PWP2Q15269 919 aaKnown RBP6.87□□□□□ -1.31
GYPB-213ENST00000513128 ENOX2Q16206 610 aaKnown RBP6.87□□□□□ -1.31
GYPB-213ENST00000513128 LY6KQ17RY6 165 aa6.87□□□□□ -1.31
GYPB-213ENST00000513128 SDE2Q6IQ49 451 aa6.87□□□□□ -1.31
GYPB-213ENST00000513128 GDF6Q6KF10 455 aaPredicted RBP6.87□□□□□ -1.31
GYPB-213ENST00000513128 PPP1R18Q6NYC8 613 aa6.87□□□□□ -1.31
GYPB-213ENST00000513128 NFRKBQ6P4R8 1299 aa6.87□□□□□ -1.31
GYPB-213ENST00000513128 MFSD6Q6ZSS7 791 aa6.87□□□□□ -1.31
GYPB-213ENST00000513128 ATCAYQ86WG3 371 aa6.87□□□□□ -1.31
GYPB-213ENST00000513128 SCFD2Q8WU76 684 aa6.87□□□□□ -1.31
GYPB-213ENST00000513128 AFG1LQ8WV93 481 aa6.87□□□□□ -1.31
GYPB-213ENST00000513128 KAT2BQ92831 832 aa6.87□□□□□ -1.31
GYPB-213ENST00000513128 TTC14Q96N46 770 aa6.87□□□□□ -1.31
GYPB-213ENST00000513128 SEZ6LQ9BYH1 1024 aa6.87□□□□□ -1.31
GYPB-213ENST00000513128 SCUBE2Q9NQ36 999 aa6.87□□□□□ -1.31
GYPB-213ENST00000513128 PCDHGB7Q9Y5F8 929 aa6.87□□□□□ -1.31
GYPB-213ENST00000513128 MTCH2Q9Y6C9 303 aa6.87□□□□□ -1.31
GYPB-213ENST00000513128 DOCK5Q9H7D0 1870 aa6.86□□□□□ -1.31
GYPB-213ENST00000513128 B4E1Z4 1266 aa6.86□□□□□ -1.31
GYPB-213ENST00000513128 OPLAHO14841 1288 aa6.86□□□□□ -1.31
GYPB-213ENST00000513128 LPXNO60711 386 aa6.86□□□□□ -1.31
GYPB-213ENST00000513128 IGHDP01880 384 aa6.86□□□□□ -1.31
GYPB-213ENST00000513128 PFKMP08237 780 aa6.86□□□□□ -1.31
GYPB-213ENST00000513128 MMP3P08254 477 aa6.86□□□□□ -1.31
GYPB-213ENST00000513128 SDSP20132 328 aa6.86□□□□□ -1.31
GYPB-213ENST00000513128 COPS2P61201 443 aa6.86□□□□□ -1.31
GYPB-213ENST00000513128 RBL2Q08999 1139 aa6.86□□□□□ -1.31
GYPB-213ENST00000513128 CDC37Q16543 378 aaPredicted RBP6.86□□□□□ -1.31
GYPB-213ENST00000513128 TMEM67Q5HYA8 995 aa6.86□□□□□ -1.31
GYPB-213ENST00000513128 TBCELQ5QJ74 424 aa6.86□□□□□ -1.31
GYPB-213ENST00000513128 EGFLAMQ63HQ2 1017 aa6.86□□□□□ -1.31
GYPB-213ENST00000513128 SEPT14Q6ZU15 432 aa6.86□□□□□ -1.31
GYPB-213ENST00000513128 CHST3Q7LGC8 479 aa6.86□□□□□ -1.31
GYPB-213ENST00000513128 BPHLQ86WA6 291 aaPredicted RBP6.86□□□□□ -1.31
GYPB-213ENST00000513128 HERC6Q8IVU3 1022 aa6.86□□□□□ -1.31
GYPB-213ENST00000513128 ADGRF4Q8IZF3 695 aa6.86□□□□□ -1.31
GYPB-213ENST00000513128 ZNF511Q8NB15 262 aa6.86□□□□□ -1.31
GYPB-213ENST00000513128 DNERQ8NFT8 737 aa6.86□□□□□ -1.31
GYPB-213ENST00000513128 SYTL5Q8TDW5 730 aaPredicted RBP6.86□□□□□ -1.31
GYPB-213ENST00000513128 ARNTL2Q8WYA1 636 aa6.86□□□□□ -1.31
GYPB-213ENST00000513128 WNT8BQ93098 351 aa6.86□□□□□ -1.31
GYPB-213ENST00000513128 RILPL2Q969X0 211 aa6.86□□□□□ -1.31
GYPB-213ENST00000513128 UHRF1Q96T88 793 aaPredicted RBP6.86□□□□□ -1.31
GYPB-213ENST00000513128 IL25Q9H293 177 aa6.86□□□□□ -1.31
GYPB-213ENST00000513128 STIM2Q9P246 746 aa6.86□□□□□ -1.31
GYPB-213ENST00000513128 SERTAD1Q9UHV2 236 aa6.86□□□□□ -1.31
GYPB-213ENST00000513128 LRFN2Q9ULH4 789 aa6.86□□□□□ -1.31
GYPB-213ENST00000513128 SIP14410 1827 aa6.85□□□□□ -1.31
GYPB-213ENST00000513128 TRANK1O15050 2925 aa6.85□□□□□ -1.31
GYPB-213ENST00000513128 NKRFO15226 690 aaKnown RBP eCLIP6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms