RNA–Protein interactions for RNA: ENST00000512979.1

TRIO-220, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 5

Gene TRIO, Length 292 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-220ENST00000512979 ALG1LQ6GMV1 187 aa11.04□□□□□ -0.64
TRIO-220ENST00000512979 TREML1Q86YW5 311 aa11.04□□□□□ -0.64
TRIO-220ENST00000512979 GPR152Q8TDT2 470 aa11.04□□□□□ -0.64
TRIO-220ENST00000512979 RHBDD1Q8TEB9 315 aa11.04□□□□□ -0.64
TRIO-220ENST00000512979 RNPC3Q96LT9 517 aaKnown RBP11.04□□□□□ -0.64
TRIO-220ENST00000512979 ZKSCAN3Q9BRR0 538 aa11.04□□□□□ -0.64
TRIO-220ENST00000512979 AP5M1Q9H0R1 490 aa11.04□□□□□ -0.64
TRIO-220ENST00000512979 PDGFCQ9NRA1 345 aa11.04□□□□□ -0.64
TRIO-220ENST00000512979 TBX21Q9UL17 535 aa11.04□□□□□ -0.64
TRIO-220ENST00000512979 DYNC1LI2O43237 492 aaPredicted RBP11.03□□□□□ -0.64
TRIO-220ENST00000512979 ZEB2O60315 1214 aa11.03□□□□□ -0.64
TRIO-220ENST00000512979 TIMP1P01033 207 aa11.03□□□□□ -0.64
TRIO-220ENST00000512979 SNHG28P0DPA3 235 aa11.03□□□□□ -0.64
TRIO-220ENST00000512979 ALDH5A1P51649 535 aaPredicted RBP11.03□□□□□ -0.64
TRIO-220ENST00000512979 NKX3-2P78367 333 aa11.03□□□□□ -0.64
TRIO-220ENST00000512979 FSCN1Q16658 493 aaKnown RBP11.03□□□□□ -0.64
TRIO-220ENST00000512979 IQSEC1Q6DN90 963 aa11.03□□□□□ -0.64
TRIO-220ENST00000512979 TAPT1Q6NXT6 567 aa11.03□□□□□ -0.64
TRIO-220ENST00000512979 CXCL17Q6UXB2 119 aa11.03□□□□□ -0.64
TRIO-220ENST00000512979 SLC30A10Q6XR72 485 aa11.03□□□□□ -0.64
TRIO-220ENST00000512979 KIAA1211Q6ZU35 1233 aa11.03□□□□□ -0.64
TRIO-220ENST00000512979 MORC4Q8TE76 937 aa11.03□□□□□ -0.64
TRIO-220ENST00000512979 GUCD1Q96NT3 240 aa11.03□□□□□ -0.64
TRIO-220ENST00000512979 VTA1Q9NP79 307 aa11.03□□□□□ -0.64
TRIO-220ENST00000512979 ADD3Q9UEY8 706 aaKnown RBP11.03□□□□□ -0.64
TRIO-220ENST00000512979 PNMA2Q9UL42 364 aa11.03□□□□□ -0.64
TRIO-220ENST00000512979 TLR3O15455 904 aaKnown RBP11.02□□□□□ -0.65
TRIO-220ENST00000512979 CABYRO75952 493 aa11.02□□□□□ -0.65
TRIO-220ENST00000512979 GOLGA8HP0CJ92 632 aa11.02□□□□□ -0.65
TRIO-220ENST00000512979 PCSK2P16519 638 aa11.02□□□□□ -0.65
TRIO-220ENST00000512979 CALML3P27482 149 aa11.02□□□□□ -0.65
TRIO-220ENST00000512979 NT5C2P49902 561 aa11.02□□□□□ -0.65
TRIO-220ENST00000512979 SMAD3P84022 425 aaKnown RBP11.02□□□□□ -0.65
TRIO-220ENST00000512979 CCDC178Q5BJE1 867 aa11.02□□□□□ -0.65
TRIO-220ENST00000512979 TMEM63BQ5T3F8 832 aa11.02□□□□□ -0.65
TRIO-220ENST00000512979 GPATCH4Q5T3I0 446 aaKnown RBP11.02□□□□□ -0.65
TRIO-220ENST00000512979 RNF207Q6ZRF8 634 aa11.02□□□□□ -0.65
TRIO-220ENST00000512979 IQCA1Q86XH1 822 aa11.02□□□□□ -0.65
TRIO-220ENST00000512979 DGKHQ86XP1 1220 aa11.02□□□□□ -0.65
TRIO-220ENST00000512979 FAM126BQ8IXS8 530 aa11.02□□□□□ -0.65
TRIO-220ENST00000512979 CLEC4DQ8WXI8 215 aa11.02□□□□□ -0.65
TRIO-220ENST00000512979 DSCC1Q9BVC3 393 aa11.02□□□□□ -0.65
TRIO-220ENST00000512979 PKD2L1Q9P0L9 805 aa11.02□□□□□ -0.65
TRIO-220ENST00000512979 Q9Y3F1 56 aa11.02□□□□□ -0.65
TRIO-220ENST00000512979 WDR19Q8NEZ3 1342 aa11.02□□□□□ -0.65
TRIO-220ENST00000512979 LOC102724159A0A0B4J2E5 919 aa11.01□□□□□ -0.65
TRIO-220ENST00000512979 B4E1Z4 1266 aa11.01□□□□□ -0.65
TRIO-220ENST00000512979 RPS6P62753 249 aaKnown RBP11.01□□□□□ -0.65
TRIO-220ENST00000512979 ORC1Q13415 861 aa11.01□□□□□ -0.65
TRIO-220ENST00000512979 PPIGQ13427 754 aaKnown RBP eCLIP11.01□□□□□ -0.652e-6■□□□□ 10.7
TRIO-220ENST00000512979 PWP2Q15269 919 aaKnown RBP11.01□□□□□ -0.65
TRIO-220ENST00000512979 IMMTQ16891 758 aaKnown RBP11.01□□□□□ -0.65
TRIO-220ENST00000512979 USH1GQ495M9 461 aa11.01□□□□□ -0.65
TRIO-220ENST00000512979 C8orf34Q49A92 452 aa11.01□□□□□ -0.65
TRIO-220ENST00000512979 DUSP28Q4G0W2 176 aa11.01□□□□□ -0.65
TRIO-220ENST00000512979 MFSD5Q6N075 450 aa11.01□□□□□ -0.65
TRIO-220ENST00000512979 NT5DC4Q86YG4 428 aa11.01□□□□□ -0.65
TRIO-220ENST00000512979 SNIP1Q8TAD8 396 aaKnown RBP11.01□□□□□ -0.65
TRIO-220ENST00000512979 WDR11Q9BZH6 1224 aa11.01□□□□□ -0.65
TRIO-220ENST00000512979 UBA5Q9GZZ9 404 aa11.01□□□□□ -0.65
TRIO-220ENST00000512979 CPVLQ9H3G5 476 aa11.01□□□□□ -0.65
TRIO-220ENST00000512979 SEMA6BQ9H3T3 888 aa11.01□□□□□ -0.65
TRIO-220ENST00000512979 KAT14Q9H8E8 782 aa11.01□□□□□ -0.65
TRIO-220ENST00000512979 CTNNA3Q9UI47 895 aa11.01□□□□□ -0.65
TRIO-220ENST00000512979 SUPT16HQ9Y5B9 1047 aaKnown RBP11.01□□□□□ -0.65
TRIO-220ENST00000512979 LRRC37A2A6NM11 1700 aa11.01□□□□□ -0.65
TRIO-220ENST00000512979 J3QL48 77 aa11□□□□□ -0.65
TRIO-220ENST00000512979 CD4P01730 458 aa11□□□□□ -0.65
TRIO-220ENST00000512979 TIMP2P16035 220 aa11□□□□□ -0.65
TRIO-220ENST00000512979 GNA15P30679 374 aa11□□□□□ -0.65
TRIO-220ENST00000512979 PLA2G4AP47712 749 aa11□□□□□ -0.65
TRIO-220ENST00000512979 RAD51AP2Q09MP3 1159 aa11□□□□□ -0.65
TRIO-220ENST00000512979 ITGA7Q13683 1181 aa11□□□□□ -0.65
TRIO-220ENST00000512979 CDC37Q16543 378 aaPredicted RBP11□□□□□ -0.65
TRIO-220ENST00000512979 ZNF598Q86UK7 904 aaKnown RBP11□□□□□ -0.65
TRIO-220ENST00000512979 TMEM199Q8N511 208 aa11□□□□□ -0.65
TRIO-220ENST00000512979 SLC43A3Q8NBI5 491 aa11□□□□□ -0.65
TRIO-220ENST00000512979 ANKS1AQ92625 1134 aa11□□□□□ -0.65
TRIO-220ENST00000512979 MPHOSPH6Q99547 160 aaKnown RBP11□□□□□ -0.65
TRIO-220ENST00000512979 CDX2Q99626 313 aaPredicted RBP11□□□□□ -0.65
TRIO-220ENST00000512979 BUD13Q9BRD0 619 aaKnown RBP eCLIP11□□□□□ -0.652e-11■□□□□ 8.7
TRIO-220ENST00000512979 LCTP09848 1927 aa10.99□□□□□ -0.65
TRIO-220ENST00000512979 A6NHS1 94 aa10.99□□□□□ -0.65
TRIO-220ENST00000512979 DLL1O00548 723 aa10.99□□□□□ -0.65
TRIO-220ENST00000512979 ACRP10323 421 aa10.99□□□□□ -0.65
TRIO-220ENST00000512979 GSPT1P15170 499 aaKnown RBP10.99□□□□□ -0.65
TRIO-220ENST00000512979 CSF2RAP15509 400 aa10.99□□□□□ -0.65
TRIO-220ENST00000512979 CYP2C18P33260 490 aa10.99□□□□□ -0.65
TRIO-220ENST00000512979 PSMC6P62333 389 aa10.99□□□□□ -0.65
TRIO-220ENST00000512979 FANCCQ00597 558 aa10.99□□□□□ -0.65
TRIO-220ENST00000512979 ASPRV1Q53RT3 343 aa10.99□□□□□ -0.65
TRIO-220ENST00000512979 TMEM240Q5SV17 173 aa10.99□□□□□ -0.65
TRIO-220ENST00000512979 ENAHQ8N8S7 591 aaPredicted RBP10.99□□□□□ -0.65
TRIO-220ENST00000512979 DNERQ8NFT8 737 aa10.99□□□□□ -0.65
TRIO-220ENST00000512979 OR6J1Q8NGC5 347 aa10.99□□□□□ -0.65
TRIO-220ENST00000512979 PIK3R5Q8WYR1 880 aa10.99□□□□□ -0.65
TRIO-220ENST00000512979 UBAC1Q9BSL1 405 aa10.99□□□□□ -0.65
TRIO-220ENST00000512979 KRT23Q9C075 422 aa10.99□□□□□ -0.65
TRIO-220ENST00000512979 GRIP2Q9C0E4 1043 aa10.99□□□□□ -0.65
TRIO-220ENST00000512979 IL25Q9H293 177 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms