RNA–Protein interactions for RNA: ENST00000512669.1

LETM1-207, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

TSL 1 (best)

Gene LETM1, Length 966 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-207ENST00000512669 UPF3BQ9BZI7 483 aaKnown RBP16.67■□□□□ 0.26
LETM1-207ENST00000512669 NRCAMQ92823 1304 aa16.67■□□□□ 0.26
LETM1-207ENST00000512669 KAT6AQ92794 2004 aa16.67■□□□□ 0.26
LETM1-207ENST00000512669 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.66■□□□□ 0.26
LETM1-207ENST00000512669 C5orf67F2Z3F1 127 aa16.66■□□□□ 0.26
LETM1-207ENST00000512669 H3BQ06 376 aaPredicted RBP16.66■□□□□ 0.26
LETM1-207ENST00000512669 UPP2O95045 317 aa16.66■□□□□ 0.26
LETM1-207ENST00000512669 RPLP2P05387 115 aaKnown RBP16.66■□□□□ 0.26
LETM1-207ENST00000512669 NEFLP07196 543 aa16.66■□□□□ 0.26
LETM1-207ENST00000512669 HMGB1P09429 215 aaKnown RBP16.66■□□□□ 0.26
LETM1-207ENST00000512669 ADD1P35611 737 aaKnown RBP16.66■□□□□ 0.26
LETM1-207ENST00000512669 APOBRQ0VD83 1088 aa16.66■□□□□ 0.26
LETM1-207ENST00000512669 RTN1Q16799 776 aa16.66■□□□□ 0.26
LETM1-207ENST00000512669 PCNX4Q63HM2 1172 aa16.66■□□□□ 0.26
LETM1-207ENST00000512669 TAF2Q6P1X5 1199 aa16.66■□□□□ 0.26
LETM1-207ENST00000512669 RPAINQ86UA6 219 aa16.66■□□□□ 0.26
LETM1-207ENST00000512669 RSPH3Q86UC2 560 aa16.66■□□□□ 0.26
LETM1-207ENST00000512669 FIBCD1Q8N539 461 aa16.66■□□□□ 0.26
LETM1-207ENST00000512669 POP1Q99575 1024 aaKnown RBP16.66■□□□□ 0.26
LETM1-207ENST00000512669 GPR20Q99678 358 aa16.66■□□□□ 0.26
LETM1-207ENST00000512669 RBM28Q9NW13 759 aaKnown RBP16.66■□□□□ 0.26
LETM1-207ENST00000512669 PPP4R2Q9NY27 417 aa16.66■□□□□ 0.26
LETM1-207ENST00000512669 V9GY48 417 aaPredicted RBP16.66■□□□□ 0.26
LETM1-207ENST00000512669 ARHGAP4P98171 946 aa16.65■□□□□ 0.26
LETM1-207ENST00000512669 ZP2Q05996 745 aa16.65■□□□□ 0.26
LETM1-207ENST00000512669 CYFIP1Q7L576 1253 aa16.65■□□□□ 0.26
LETM1-207ENST00000512669 HEATR3Q7Z4Q2 680 aa16.65■□□□□ 0.26
LETM1-207ENST00000512669 ADHFE1Q8IWW8 467 aa16.65■□□□□ 0.26
LETM1-207ENST00000512669 FBXL16Q8N461 479 aa16.65■□□□□ 0.26
LETM1-207ENST00000512669 LMBR1Q8WVP7 490 aa16.65■□□□□ 0.26
LETM1-207ENST00000512669 BRF1Q92994 677 aa16.65■□□□□ 0.26
LETM1-207ENST00000512669 CUL5Q93034 780 aa16.65■□□□□ 0.26
LETM1-207ENST00000512669 AGXT2Q9BYV1 514 aa16.65■□□□□ 0.26
LETM1-207ENST00000512669 SETD4Q9NVD3 440 aa16.65■□□□□ 0.26
LETM1-207ENST00000512669 GOLGA8AA7E2F4 631 aa16.64■□□□□ 0.25
LETM1-207ENST00000512669 GOLGA8BA8MQT2 603 aa16.64■□□□□ 0.25
LETM1-207ENST00000512669 STXBP3O00186 592 aa16.64■□□□□ 0.25
LETM1-207ENST00000512669 ADAMTS3O15072 1205 aa16.64■□□□□ 0.25
LETM1-207ENST00000512669 ATP9AO75110 1047 aa16.64■□□□□ 0.25
LETM1-207ENST00000512669 ITGB5P18084 799 aa16.64■□□□□ 0.25
LETM1-207ENST00000512669 RPS6KB1P23443 525 aa16.64■□□□□ 0.25
LETM1-207ENST00000512669 CTNNB1P35222 781 aa16.64■□□□□ 0.25
LETM1-207ENST00000512669 ADAM17P78536 824 aa16.64■□□□□ 0.25
LETM1-207ENST00000512669 BLOC1S2Q6QNY1 142 aa16.64■□□□□ 0.25
LETM1-207ENST00000512669 EP400NLQ6ZTU2 488 aa16.64■□□□□ 0.25
LETM1-207ENST00000512669 NLRX1Q86UT6 975 aa16.64■□□□□ 0.25
LETM1-207ENST00000512669 CDHR1Q96JP9 859 aa16.64■□□□□ 0.25
LETM1-207ENST00000512669 CLDND1Q9NY35 253 aa16.64■□□□□ 0.25
LETM1-207ENST00000512669 PCDHA6Q9UN73 950 aa16.64■□□□□ 0.25
LETM1-207ENST00000512669 PCDHA8Q9Y5H6 950 aa16.64■□□□□ 0.25
LETM1-207ENST00000512669 ADGRA3Q8IWK6 1321 aa16.64■□□□□ 0.25
LETM1-207ENST00000512669 POTEB3A0JP26 581 aa16.63■□□□□ 0.25
LETM1-207ENST00000512669 C19orf67A6NJJ6 358 aa16.63■□□□□ 0.25
LETM1-207ENST00000512669 REC8O95072 547 aa16.63■□□□□ 0.25
LETM1-207ENST00000512669 BMPR1AP36894 532 aa16.63■□□□□ 0.25
LETM1-207ENST00000512669 RCAN1P53805 252 aa16.63■□□□□ 0.25
LETM1-207ENST00000512669 POTEBQ6S5H4 581 aa16.63■□□□□ 0.25
LETM1-207ENST00000512669 PPP2R3CQ969Q6 453 aa16.63■□□□□ 0.25
LETM1-207ENST00000512669 UIMC1Q96RL1 719 aa16.63■□□□□ 0.25
LETM1-207ENST00000512669 PLVAPQ9BX97 442 aa16.63■□□□□ 0.25
LETM1-207ENST00000512669 UBIAD1Q9Y5Z9 338 aa16.63■□□□□ 0.25
LETM1-207ENST00000512669 MYO7AQ13402 2215 aa16.62■□□□□ 0.25
LETM1-207ENST00000512669 CTC1Q2NKJ3 1217 aa16.62■□□□□ 0.25
LETM1-207ENST00000512669 TRIM50Q86XT4 487 aa16.62■□□□□ 0.25
LETM1-207ENST00000512669 CLP1Q92989 425 aaKnown RBP16.62■□□□□ 0.25
LETM1-207ENST00000512669 PGBD1Q96JS3 809 aa16.62■□□□□ 0.25
LETM1-207ENST00000512669 EHMT1Q9H9B1 1298 aa16.62■□□□□ 0.25
LETM1-207ENST00000512669 RIC8AQ9NPQ8 531 aa16.62■□□□□ 0.25
LETM1-207ENST00000512669 NID2Q14112 1375 aa16.62■□□□□ 0.25
LETM1-207ENST00000512669 DOCK5Q9H7D0 1870 aa16.61■□□□□ 0.25
LETM1-207ENST00000512669 KCNA2P16389 499 aa16.61■□□□□ 0.25
LETM1-207ENST00000512669 CLK2P49760 499 aaKnown RBP16.61■□□□□ 0.25
LETM1-207ENST00000512669 METAP2P50579 478 aaKnown RBP eCLIP16.61■□□□□ 0.25
LETM1-207ENST00000512669 EVCP57679 992 aa16.61■□□□□ 0.25
LETM1-207ENST00000512669 TOB2Q14106 344 aaPredicted RBP16.61■□□□□ 0.25
LETM1-207ENST00000512669 SMAD2Q15796 467 aaKnown RBP16.61■□□□□ 0.25
LETM1-207ENST00000512669 NTRK3Q16288 839 aa16.61■□□□□ 0.25
LETM1-207ENST00000512669 PKN1Q16512 942 aa16.61■□□□□ 0.25
LETM1-207ENST00000512669 NAALADL2Q58DX5 795 aa16.61■□□□□ 0.25
LETM1-207ENST00000512669 UTP14CQ5TAP6 766 aaKnown RBP16.61■□□□□ 0.25
LETM1-207ENST00000512669 FAM43BQ6ZT52 329 aaPredicted RBP16.61■□□□□ 0.25
LETM1-207ENST00000512669 TNPO1Q92973 898 aaKnown RBP16.61■□□□□ 0.25
LETM1-207ENST00000512669 GPRASP2Q96D09 838 aa16.61■□□□□ 0.25
LETM1-207ENST00000512669 RC3H2Q9HBD1 1191 aaKnown RBP16.61■□□□□ 0.25
LETM1-207ENST00000512669 ZSWIM6Q9HCJ5 1215 aa16.61■□□□□ 0.25
LETM1-207ENST00000512669 TMEM260Q9NX78 707 aa16.61■□□□□ 0.25
LETM1-207ENST00000512669 BARHL2Q9NY43 387 aa16.61■□□□□ 0.25
LETM1-207ENST00000512669 ERAP1Q9NZ08 941 aa16.61■□□□□ 0.25
LETM1-207ENST00000512669 NAP1L2Q9ULW6 460 aaPredicted RBP16.61■□□□□ 0.25
LETM1-207ENST00000512669 TTC3P53804 2025 aa16.6■□□□□ 0.25
LETM1-207ENST00000512669 SMCO2A6NFE2 343 aa16.6■□□□□ 0.25
LETM1-207ENST00000512669 EPB41L2O43491 1005 aaKnown RBP16.6■□□□□ 0.25
LETM1-207ENST00000512669 CHRNA1P02708 482 aa16.6■□□□□ 0.25
LETM1-207ENST00000512669 MMP1P03956 469 aa16.6■□□□□ 0.25
LETM1-207ENST00000512669 GHRP10912 638 aa16.6■□□□□ 0.25
LETM1-207ENST00000512669 NAPAP54920 295 aa16.6■□□□□ 0.25
LETM1-207ENST00000512669 PPFIA1Q13136 1202 aa16.6■□□□□ 0.25
LETM1-207ENST00000512669 SMAD4Q13485 552 aaKnown RBP16.6■□□□□ 0.25
LETM1-207ENST00000512669 PFKFB3Q16875 520 aaPredicted RBP16.6■□□□□ 0.25
LETM1-207ENST00000512669 ERICH6BQ5W0A0 696 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms