RNA–Protein interactions for RNA: ENST00000511092.5

CLCN3-207, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-207ENST00000511092 ZNF358Q9NW07 568 aa7.58□□□□□ -1.2
CLCN3-207ENST00000511092 ATXN7O15265 892 aaPredicted RBP7.57□□□□□ -1.2
CLCN3-207ENST00000511092 WISP1O95388 367 aa7.57□□□□□ -1.2
CLCN3-207ENST00000511092 RFC2P35250 354 aa7.57□□□□□ -1.2
CLCN3-207ENST00000511092 IGHMBP2P38935 993 aaKnown RBP7.57□□□□□ -1.2
CLCN3-207ENST00000511092 GYG1P46976 350 aa7.57□□□□□ -1.2
CLCN3-207ENST00000511092 RGS3P49796 1198 aa7.57□□□□□ -1.2
CLCN3-207ENST00000511092 NOVA1P51513 510 aaKnown RBP7.57□□□□□ -1.2
CLCN3-207ENST00000511092 BACE1P56817 501 aa7.57□□□□□ -1.2
CLCN3-207ENST00000511092 JAG1P78504 1218 aa7.57□□□□□ -1.2
CLCN3-207ENST00000511092 CCDC102BQ68D86 513 aa7.57□□□□□ -1.2
CLCN3-207ENST00000511092 LYPD4Q6UWN0 246 aa7.57□□□□□ -1.2
CLCN3-207ENST00000511092 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.57□□□□□ -1.2
CLCN3-207ENST00000511092 G2E3Q7L622 706 aa7.57□□□□□ -1.2
CLCN3-207ENST00000511092 UBE3BQ7Z3V4 1068 aa7.57□□□□□ -1.2
CLCN3-207ENST00000511092 RBM23Q86U06 439 aaKnown RBP7.57□□□□□ -1.2
CLCN3-207ENST00000511092 TPCN2Q8NHX9 752 aa7.57□□□□□ -1.2
CLCN3-207ENST00000511092 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.57□□□□□ -1.2
CLCN3-207ENST00000511092 NEK1Q96PY6 1258 aa7.57□□□□□ -1.2
CLCN3-207ENST00000511092 PLA2G12BQ9BX93 195 aa7.57□□□□□ -1.2
CLCN3-207ENST00000511092 MOV10L1Q9BXT6 1211 aaKnown RBP7.57□□□□□ -1.2
CLCN3-207ENST00000511092 STK31Q9BXU1 1019 aa7.57□□□□□ -1.2
CLCN3-207ENST00000511092 UPF3AQ9H1J1 476 aaKnown RBP7.57□□□□□ -1.2
CLCN3-207ENST00000511092 ALDH8A1Q9H2A2 487 aaPredicted RBP7.57□□□□□ -1.2
CLCN3-207ENST00000511092 DNAAF2Q9NVR5 837 aaKnown RBP7.57□□□□□ -1.2
CLCN3-207ENST00000511092 NRBP1Q9UHY1 535 aa7.57□□□□□ -1.2
CLCN3-207ENST00000511092 FBXL21Q9UKT6 434 aa7.57□□□□□ -1.2
CLCN3-207ENST00000511092 PLXNB3Q9ULL4 1909 aa7.56□□□□□ -1.2
CLCN3-207ENST00000511092 WDR46O15213 610 aaKnown RBP7.56□□□□□ -1.2
CLCN3-207ENST00000511092 PGK2P07205 417 aa7.56□□□□□ -1.2
CLCN3-207ENST00000511092 CSF1RP07333 972 aa7.56□□□□□ -1.2
CLCN3-207ENST00000511092 CELA2BP08218 269 aaPredicted RBP7.56□□□□□ -1.2
CLCN3-207ENST00000511092 MX2P20592 715 aa7.56□□□□□ -1.2
CLCN3-207ENST00000511092 CTNNB1P35222 781 aa7.56□□□□□ -1.2
CLCN3-207ENST00000511092 NRIP1P48552 1158 aa7.56□□□□□ -1.2
CLCN3-207ENST00000511092 CASP7P55210 303 aa7.56□□□□□ -1.2
CLCN3-207ENST00000511092 HTRA4P83105 476 aaPredicted RBP7.56□□□□□ -1.2
CLCN3-207ENST00000511092 GCKRQ14397 625 aa7.56□□□□□ -1.2
CLCN3-207ENST00000511092 LBRQ14739 615 aaKnown RBP7.56□□□□□ -1.2
CLCN3-207ENST00000511092 CSRP2Q16527 193 aa7.56□□□□□ -1.2
CLCN3-207ENST00000511092 ZSCAN29Q8IWY8 852 aaPredicted RBP7.56□□□□□ -1.2
CLCN3-207ENST00000511092 ZBTB44Q8NCP5 570 aa7.56□□□□□ -1.2
CLCN3-207ENST00000511092 ATRIPQ8WXE1 791 aa7.56□□□□□ -1.2
CLCN3-207ENST00000511092 TSR2Q969E8 191 aaKnown RBP7.56□□□□□ -1.2
CLCN3-207ENST00000511092 SAMD11Q96NU1 681 aa7.56□□□□□ -1.2
CLCN3-207ENST00000511092 MPHOSPH8Q99549 860 aa7.56□□□□□ -1.2
CLCN3-207ENST00000511092 TINF2Q9BSI4 451 aa7.56□□□□□ -1.2
CLCN3-207ENST00000511092 TBC1D17Q9HA65 648 aa7.56□□□□□ -1.2
CLCN3-207ENST00000511092 RBM19Q9Y4C8 960 aaKnown RBP7.56□□□□□ -1.2
CLCN3-207ENST00000511092 INSL6Q9Y581 213 aa7.56□□□□□ -1.2
CLCN3-207ENST00000511092 PCDHGA2Q9Y5H1 932 aa7.56□□□□□ -1.2
CLCN3-207ENST00000511092 ASTN1O14525 1302 aa7.55□□□□□ -1.2
CLCN3-207ENST00000511092 PALM3A6NDB9 673 aaPredicted RBP7.55□□□□□ -1.2
CLCN3-207ENST00000511092 NARSO43776 548 aaKnown RBP7.55□□□□□ -1.2
CLCN3-207ENST00000511092 DUSP11O75319 330 aaKnown RBP7.55□□□□□ -1.2
CLCN3-207ENST00000511092 THBS1P07996 1170 aa7.55□□□□□ -1.2
CLCN3-207ENST00000511092 ERCC3P19447 782 aa7.55□□□□□ -1.2
CLCN3-207ENST00000511092 DNAJB1P25685 340 aa7.55□□□□□ -1.2
CLCN3-207ENST00000511092 GJA9P57773 515 aa7.55□□□□□ -1.2
CLCN3-207ENST00000511092 CLDN10P78369 228 aa7.55□□□□□ -1.2
CLCN3-207ENST00000511092 CSTF1Q05048 431 aaKnown RBP7.55□□□□□ -1.2
CLCN3-207ENST00000511092 SF3A2Q15428 464 aaKnown RBP7.55□□□□□ -1.2
CLCN3-207ENST00000511092 CCDC27Q2M243 656 aa7.55□□□□□ -1.2
CLCN3-207ENST00000511092 TWISTNBQ3B726 338 aaPredicted RBP7.55□□□□□ -1.2
CLCN3-207ENST00000511092 AASDHQ4L235 1098 aaPredicted RBP7.55□□□□□ -1.2
CLCN3-207ENST00000511092 ARSJQ5FYB0 599 aaPredicted RBP7.55□□□□□ -1.2
CLCN3-207ENST00000511092 TSSK4Q6SA08 328 aa7.55□□□□□ -1.2
CLCN3-207ENST00000511092 LBX2Q6XYB7 198 aa7.55□□□□□ -1.2
CLCN3-207ENST00000511092 TMEM151AQ8N4L1 468 aa7.55□□□□□ -1.2
CLCN3-207ENST00000511092 FAM181AQ8N9Y4 354 aa7.55□□□□□ -1.2
CLCN3-207ENST00000511092 C1orf216Q8TAB5 229 aa7.55□□□□□ -1.2
CLCN3-207ENST00000511092 MKNK1Q9BUB5 465 aa7.55□□□□□ -1.2
CLCN3-207ENST00000511092 SCHIP1Q9P0W5 487 aaPredicted RBP7.55□□□□□ -1.2
CLCN3-207ENST00000511092 ZHX1Q9UKY1 873 aaPredicted RBP7.55□□□□□ -1.2
CLCN3-207ENST00000511092 KIAA1024Q9UPX6 916 aa7.55□□□□□ -1.2
CLCN3-207ENST00000511092 RAXQ9Y2V3 346 aa7.55□□□□□ -1.2
CLCN3-207ENST00000511092 USP3Q9Y6I4 520 aa7.55□□□□□ -1.2
CLCN3-207ENST00000511092 CACNA1EQ15878 2313 aa7.55□□□□□ -1.2
CLCN3-207ENST00000511092 MROH5Q6ZUA9 1318 aa7.54□□□□□ -1.2
CLCN3-207ENST00000511092 SPAG17Q6Q759 2223 aa7.54□□□□□ -1.2
CLCN3-207ENST00000511092 MGAQ8IWI9 3026 aa7.54□□□□□ -1.2
CLCN3-207ENST00000511092 SCN10AQ9Y5Y9 1956 aa7.54□□□□□ -1.2
CLCN3-207ENST00000511092 ANKRD18BA2A2Z9 1011 aa7.54□□□□□ -1.2
CLCN3-207ENST00000511092 TBC1D4O60343 1298 aa7.54□□□□□ -1.2
CLCN3-207ENST00000511092 LGR5O75473 907 aa7.54□□□□□ -1.2
CLCN3-207ENST00000511092 FRAT2O75474 233 aaPredicted RBP7.54□□□□□ -1.2
CLCN3-207ENST00000511092 GDF11O95390 407 aa7.54□□□□□ -1.2
CLCN3-207ENST00000511092 LINC00271P0C7V0 271 aa7.54□□□□□ -1.2
CLCN3-207ENST00000511092 RASA1P20936 1047 aa7.54□□□□□ -1.2
CLCN3-207ENST00000511092 LIMK1P53667 647 aa7.54□□□□□ -1.2
CLCN3-207ENST00000511092 TMEM63BQ5T3F8 832 aa7.54□□□□□ -1.2
CLCN3-207ENST00000511092 HIST2H2BCQ6DN03 193 aa7.54□□□□□ -1.2
CLCN3-207ENST00000511092 KANK3Q6NY19 840 aa7.54□□□□□ -1.2
CLCN3-207ENST00000511092 SCARF2Q96GP6 870 aaPredicted RBP7.54□□□□□ -1.2
CLCN3-207ENST00000511092 ZNF594Q96JF6 807 aaPredicted RBP7.54□□□□□ -1.2
CLCN3-207ENST00000511092 S1PR5Q9H228 398 aa7.54□□□□□ -1.2
CLCN3-207ENST00000511092 CRISPLD1Q9H336 500 aa7.54□□□□□ -1.2
CLCN3-207ENST00000511092 POMKQ9H5K3 350 aa7.54□□□□□ -1.2
CLCN3-207ENST00000511092 MYH16Q9H6N6 1097 aa7.54□□□□□ -1.2
CLCN3-207ENST00000511092 DDX4Q9NQI0 724 aaKnown RBP7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms