RNA–Protein interactions for RNA: ENST00000510626.5

HTT-208, Transcript of huntingtin, humanhuman

TSL 1 (best)

Gene HTT, Length 14,438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-208ENST00000510626 KRT27Q7Z3Y8 459 aa8.98□□□□□ -0.97
HTT-208ENST00000510626 CFAP74Q9C0B2 1584 aa8.98□□□□□ -0.97
HTT-208ENST00000510626 SGK1O00141 431 aa8.98□□□□□ -0.97
HTT-208ENST00000510626 HNRNPCP07910 306 aaKnown RBP eCLIP8.98□□□□□ -0.97
HTT-208ENST00000510626 STAT4Q14765 748 aa8.98□□□□□ -0.97
HTT-208ENST00000510626 ZBTB18Q99592 522 aa8.98□□□□□ -0.97
HTT-208ENST00000510626 ZNF212Q9UDV6 495 aa8.98□□□□□ -0.97
HTT-208ENST00000510626 ATP8B3O60423 1300 aa8.98□□□□□ -0.97
HTT-208ENST00000510626 TMED10P49755 219 aaKnown RBP8.98□□□□□ -0.97
HTT-208ENST00000510626 RASGRF1Q13972 1273 aa8.98□□□□□ -0.97
HTT-208ENST00000510626 KAZNQ674X7 775 aa8.98□□□□□ -0.97
HTT-208ENST00000510626 STRIP2Q9ULQ0 834 aa8.98□□□□□ -0.97
HTT-208ENST00000510626 SPAG6O75602 509 aa8.98□□□□□ -0.97
HTT-208ENST00000510626 CCNE1P24864 410 aa8.98□□□□□ -0.97
HTT-208ENST00000510626 LARP4BQ92615 738 aaKnown RBP8.98□□□□□ -0.97
HTT-208ENST00000510626 PLIN2Q99541 437 aa8.98□□□□□ -0.97
HTT-208ENST00000510626 HSPA2P54652 639 aa8.97□□□□□ -0.97
HTT-208ENST00000510626 POLR2FP61218 127 aaKnown RBP8.97□□□□□ -0.97
HTT-208ENST00000510626 MRPL28Q13084 256 aaKnown RBP8.97□□□□□ -0.97
HTT-208ENST00000510626 KDM4CQ9H3R0 1056 aa8.97□□□□□ -0.97
HTT-208ENST00000510626 PKD2L2Q9NZM6 624 aa8.97□□□□□ -0.97
HTT-208ENST00000510626 STK36Q9NRP7 1315 aa8.97□□□□□ -0.97
HTT-208ENST00000510626 TBKBP1A7MCY6 615 aa8.97□□□□□ -0.97
HTT-208ENST00000510626 DEFA1P59665 94 aa8.97□□□□□ -0.97
HTT-208ENST00000510626 DEFA3P59666 94 aa8.97□□□□□ -0.97
HTT-208ENST00000510626 KIF23Q02241 960 aaPredicted RBP8.97□□□□□ -0.97
HTT-208ENST00000510626 SCRN1Q12765 414 aa8.97□□□□□ -0.97
HTT-208ENST00000510626 RNF169Q8NCN4 708 aa8.97□□□□□ -0.97
HTT-208ENST00000510626 ASPSCR1Q9BZE9 553 aa8.97□□□□□ -0.97
HTT-208ENST00000510626 WWP1Q9H0M0 922 aa8.97□□□□□ -0.97
HTT-208ENST00000510626 NLRC4Q9NPP4 1024 aa8.97□□□□□ -0.97
HTT-208ENST00000510626 DNAJC12Q9UKB3 198 aa8.97□□□□□ -0.97
HTT-208ENST00000510626 HGSO14964 777 aaPredicted RBP8.97□□□□□ -0.97
HTT-208ENST00000510626 DIAPH2O60879 1101 aa8.97□□□□□ -0.97
HTT-208ENST00000510626 SETD3Q86TU7 594 aaPredicted RBP8.97□□□□□ -0.97
HTT-208ENST00000510626 ATL2Q8NHH9 583 aa8.97□□□□□ -0.97
HTT-208ENST00000510626 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.97□□□□□ -0.979e-7■■■□□ 15
HTT-208ENST00000510626 COPRSQ9NQ92 184 aa8.97□□□□□ -0.97
HTT-208ENST00000510626 NFU1Q9UMS0 254 aa8.97□□□□□ -0.97
HTT-208ENST00000510626 FAM107AO95990 144 aa8.97□□□□□ -0.97
HTT-208ENST00000510626 SLFN12LQ6IEE8 588 aa8.97□□□□□ -0.97
HTT-208ENST00000510626 A0A1W2PQC6 194 aa8.97□□□□□ -0.97
HTT-208ENST00000510626 RPS6KA5O75582 802 aa8.97□□□□□ -0.97
HTT-208ENST00000510626 TRPA1O75762 1119 aa8.97□□□□□ -0.97
HTT-208ENST00000510626 ZSCAN20P17040 1043 aaPredicted RBP8.97□□□□□ -0.97
HTT-208ENST00000510626 PRUNE1Q86TP1 453 aa8.97□□□□□ -0.97
HTT-208ENST00000510626 FRMD8Q9BZ67 464 aaPredicted RBP8.97□□□□□ -0.97
HTT-208ENST00000510626 HESX1Q9UBX0 185 aa8.97□□□□□ -0.97
HTT-208ENST00000510626 NOVA2Q9UNW9 492 aaKnown RBP8.97□□□□□ -0.97
HTT-208ENST00000510626 TNRQ92752 1358 aa8.97□□□□□ -0.97
HTT-208ENST00000510626 SMCO2A6NFE2 343 aa8.97□□□□□ -0.97
HTT-208ENST00000510626 NEURL1BA8MQ27 555 aa8.97□□□□□ -0.97
HTT-208ENST00000510626 TNNC2P02585 160 aa8.97□□□□□ -0.97
HTT-208ENST00000510626 NFKBIAP25963 317 aa8.97□□□□□ -0.97
HTT-208ENST00000510626 AASDHQ4L235 1098 aaPredicted RBP8.97□□□□□ -0.97
HTT-208ENST00000510626 ITIH6Q6UXX5 1313 aa8.97□□□□□ -0.97
HTT-208ENST00000510626 FBXL13Q8NEE6 735 aa8.97□□□□□ -0.97
HTT-208ENST00000510626 ZFRQ96KR1 1074 aaKnown RBP8.97□□□□□ -0.97
HTT-208ENST00000510626 USTQ9Y2C2 406 aa8.97□□□□□ -0.97
HTT-208ENST00000510626 ZHX2Q9Y6X8 837 aa8.97□□□□□ -0.97
HTT-208ENST00000510626 ZNF839A8K0R7 811 aa8.97□□□□□ -0.97
HTT-208ENST00000510626 ASAP2O43150 1006 aa8.97□□□□□ -0.97
HTT-208ENST00000510626 ZMYM1Q5SVZ6 1142 aa8.97□□□□□ -0.97
HTT-208ENST00000510626 SCG3Q8WXD2 468 aaKnown RBP8.97□□□□□ -0.97
HTT-208ENST00000510626 CTNNAL1Q9UBT7 734 aa8.97□□□□□ -0.97
HTT-208ENST00000510626 TAF5LO75529 589 aa8.97□□□□□ -0.97
HTT-208ENST00000510626 PLS3P13797 630 aa8.97□□□□□ -0.97
HTT-208ENST00000510626 ITGA6P23229 1130 aa8.97□□□□□ -0.97
HTT-208ENST00000510626 C2orf54Q08AI8 447 aa8.97□□□□□ -0.97
HTT-208ENST00000510626 MED21Q13503 144 aa8.97□□□□□ -0.97
HTT-208ENST00000510626 ATP6V0A4Q9HBG4 840 aa8.97□□□□□ -0.97
HTT-208ENST00000510626 ZRANB2O95218 330 aaKnown RBP eCLIP8.97□□□□□ -0.97
HTT-208ENST00000510626 CA4P22748 312 aa8.97□□□□□ -0.97
HTT-208ENST00000510626 SEPT8Q92599 483 aa8.97□□□□□ -0.97
HTT-208ENST00000510626 SAMD9LQ8IVG5 1584 aa8.97□□□□□ -0.97
HTT-208ENST00000510626 KRT31Q15323 416 aa8.97□□□□□ -0.97
HTT-208ENST00000510626 DPH6Q7L8W6 267 aa8.97□□□□□ -0.97
HTT-208ENST00000510626 MAP3K15Q6ZN16 1313 aa8.97□□□□□ -0.97
HTT-208ENST00000510626 EFCAB14O75071 495 aa8.97□□□□□ -0.97
HTT-208ENST00000510626 APOA4P06727 396 aa8.97□□□□□ -0.97
HTT-208ENST00000510626 TAP1Q03518 808 aa8.97□□□□□ -0.97
HTT-208ENST00000510626 SLC44A4Q53GD3 710 aa8.97□□□□□ -0.97
HTT-208ENST00000510626 TAF1DQ9H5J8 278 aaPredicted RBP8.97□□□□□ -0.97
HTT-208ENST00000510626 ANKFY1Q9P2R3 1169 aa8.97□□□□□ -0.97
HTT-208ENST00000510626 CD19P15391 556 aa8.97□□□□□ -0.97
HTT-208ENST00000510626 ADGRL3Q9HAR2 1447 aa8.96□□□□□ -0.97
HTT-208ENST00000510626 PIK3R2O00459 728 aa8.96□□□□□ -0.97
HTT-208ENST00000510626 MFN1Q8IWA4 741 aa8.96□□□□□ -0.97
HTT-208ENST00000510626 TPH2Q8IWU9 490 aa8.96□□□□□ -0.97
HTT-208ENST00000510626 DAB1O75553 588 aa8.96□□□□□ -0.97
HTT-208ENST00000510626 HOXC8P31273 242 aa8.96□□□□□ -0.97
HTT-208ENST00000510626 C16orf89Q6UX73 402 aa8.96□□□□□ -0.97
HTT-208ENST00000510626 CATSPER2Q96P56 530 aa8.96□□□□□ -0.97
HTT-208ENST00000510626 PTPRTO14522 1441 aa8.96□□□□□ -0.97
HTT-208ENST00000510626 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.96□□□□□ -0.97
HTT-208ENST00000510626 CDH2P19022 906 aaPredicted RBP8.96□□□□□ -0.97
HTT-208ENST00000510626 GRIN1Q05586 938 aa8.96□□□□□ -0.97
HTT-208ENST00000510626 ATAD3BQ5T9A4 648 aa8.96□□□□□ -0.97
HTT-208ENST00000510626 STX19Q8N4C7 294 aa8.96□□□□□ -0.97
HTT-208ENST00000510626 PPP1R2P1Q96PQ5 205 aa8.96□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms