RNA–Protein interactions for RNA: ENST00000509876.5

PHF3-210, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 7,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-210ENST00000509876 PAK2Q13177 524 aa5.62□□□□□ -1.51
PHF3-210ENST00000509876 MXD4Q14582 209 aaPredicted RBP5.62□□□□□ -1.51
PHF3-210ENST00000509876 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.62□□□□□ -1.51
PHF3-210ENST00000509876 MTG1Q9BT17 334 aaPredicted RBP5.62□□□□□ -1.51
PHF3-210ENST00000509876 MRPL4Q9BYD3 311 aaKnown RBP5.62□□□□□ -1.51
PHF3-210ENST00000509876 BHMT2Q9H2M3 363 aa5.62□□□□□ -1.51
PHF3-210ENST00000509876 KIAA1586Q9HCI6 787 aa5.62□□□□□ -1.51
PHF3-210ENST00000509876 SCN11AQ9UI33 1791 aa5.62□□□□□ -1.51
PHF3-210ENST00000509876 DUOX1Q9NRD9 1551 aa5.62□□□□□ -1.51
PHF3-210ENST00000509876 ASAP2O43150 1006 aa5.62□□□□□ -1.51
PHF3-210ENST00000509876 YWHABP31946 246 aaKnown RBP5.62□□□□□ -1.51
PHF3-210ENST00000509876 RIOX2Q8IUF8 465 aa5.62□□□□□ -1.51
PHF3-210ENST00000509876 EIF2AK1Q9BQI3 630 aaKnown RBP5.62□□□□□ -1.51
PHF3-210ENST00000509876 NUCKS1Q9H1E3 243 aaKnown RBP5.62□□□□□ -1.51
PHF3-210ENST00000509876 FBXO28Q9NVF7 368 aa5.62□□□□□ -1.51
PHF3-210ENST00000509876 SUCLA2Q9P2R7 463 aaPredicted RBP5.62□□□□□ -1.51
PHF3-210ENST00000509876 GOLGA6L10A0A0M3HER8 536 aa5.62□□□□□ -1.51
PHF3-210ENST00000509876 ESYT2A0FGR8 921 aa5.62□□□□□ -1.51
PHF3-210ENST00000509876 STAG3L1P0CL83 205 aa5.62□□□□□ -1.51
PHF3-210ENST00000509876 PAFAH1B1P43034 410 aa5.62□□□□□ -1.51
PHF3-210ENST00000509876 ARPP19P56211 112 aa5.62□□□□□ -1.51
PHF3-210ENST00000509876 PEX3P56589 373 aa5.62□□□□□ -1.51
PHF3-210ENST00000509876 RHBDL3P58872 404 aa5.62□□□□□ -1.51
PHF3-210ENST00000509876 PRPF4BQ13523 1007 aaKnown RBP5.62□□□□□ -1.51
PHF3-210ENST00000509876 MCM6Q14566 821 aa5.62□□□□□ -1.51
PHF3-210ENST00000509876 GBP6Q6ZN66 633 aa5.62□□□□□ -1.51
PHF3-210ENST00000509876 CNGA4Q8IV77 575 aa5.62□□□□□ -1.51
PHF3-210ENST00000509876 ZFPM1Q8IX07 1006 aa5.62□□□□□ -1.51
PHF3-210ENST00000509876 BEST2Q8NFU1 509 aa5.62□□□□□ -1.51
PHF3-210ENST00000509876 RAD54LQ92698 747 aa5.62□□□□□ -1.51
PHF3-210ENST00000509876 AIFM3Q96NN9 605 aa5.62□□□□□ -1.51
PHF3-210ENST00000509876 RIT2Q99578 217 aa5.62□□□□□ -1.51
PHF3-210ENST00000509876 XPNPEP3Q9NQH7 507 aa5.62□□□□□ -1.51
PHF3-210ENST00000509876 AAASQ9NRG9 546 aa5.62□□□□□ -1.51
PHF3-210ENST00000509876 TMEM110-MUSTN1A8MSY1 372 aa5.62□□□□□ -1.51
PHF3-210ENST00000509876 MYL7Q01449 175 aa5.62□□□□□ -1.51
PHF3-210ENST00000509876 DGKZQ13574 1117 aa5.62□□□□□ -1.51
PHF3-210ENST00000509876 SHCBP1Q8NEM2 672 aa5.62□□□□□ -1.51
PHF3-210ENST00000509876 SBDSQ9Y3A5 250 aaKnown RBP eCLIP5.62□□□□□ -1.51
PHF3-210ENST00000509876 DAPK3O43293 454 aa5.62□□□□□ -1.51
PHF3-210ENST00000509876 RPS6KA5O75582 802 aa5.62□□□□□ -1.51
PHF3-210ENST00000509876 TBC1D8O95759 1140 aa5.62□□□□□ -1.51
PHF3-210ENST00000509876 ABL1P00519 1130 aa5.62□□□□□ -1.51
PHF3-210ENST00000509876 CYP2C9P11712 490 aa5.62□□□□□ -1.51
PHF3-210ENST00000509876 SKIP12755 728 aa5.62□□□□□ -1.51
PHF3-210ENST00000509876 CTCFP49711 727 aaPredicted RBP5.62□□□□□ -1.51
PHF3-210ENST00000509876 CUL4AQ13619 759 aa5.62□□□□□ -1.51
PHF3-210ENST00000509876 ZNF568Q3ZCX4 644 aa5.62□□□□□ -1.51
PHF3-210ENST00000509876 HOOK3Q86VS8 718 aa5.62□□□□□ -1.51
PHF3-210ENST00000509876 FBXO16Q8IX29 292 aaPredicted RBP5.62□□□□□ -1.51
PHF3-210ENST00000509876 PIGOQ8TEQ8 1089 aa5.62□□□□□ -1.51
PHF3-210ENST00000509876 CCDC127Q96BQ5 260 aa5.62□□□□□ -1.51
PHF3-210ENST00000509876 SRRTQ9BXP5 876 aaKnown RBP5.62□□□□□ -1.51
PHF3-210ENST00000509876 SHTN1A0MZ66 631 aa5.62□□□□□ -1.51
PHF3-210ENST00000509876 DTNBO60941 627 aa5.62□□□□□ -1.51
PHF3-210ENST00000509876 USP2O75604 605 aaPredicted RBP5.62□□□□□ -1.51
PHF3-210ENST00000509876 CSPG5O95196 566 aa5.62□□□□□ -1.51
PHF3-210ENST00000509876 GJC1P36383 396 aa5.62□□□□□ -1.51
PHF3-210ENST00000509876 TFAMQ00059 246 aaKnown RBP5.62□□□□□ -1.51
PHF3-210ENST00000509876 SEPT7Q16181 437 aaKnown RBP5.62□□□□□ -1.51
PHF3-210ENST00000509876 ZNF484Q5JVG2 852 aa5.62□□□□□ -1.51
PHF3-210ENST00000509876 PCNX4Q63HM2 1172 aa5.62□□□□□ -1.51
PHF3-210ENST00000509876 CCDC50Q8IVM0 306 aa5.62□□□□□ -1.51
PHF3-210ENST00000509876 NSMCE1Q8WV22 266 aa5.62□□□□□ -1.51
PHF3-210ENST00000509876 GJA10Q969M2 543 aa5.62□□□□□ -1.51
PHF3-210ENST00000509876 TIGD1Q96MW7 591 aa5.62□□□□□ -1.51
PHF3-210ENST00000509876 PHF20Q9BVI0 1012 aa5.62□□□□□ -1.51
PHF3-210ENST00000509876 TSGA10Q9BZW7 698 aa5.62□□□□□ -1.51
PHF3-210ENST00000509876 PXMP2Q9NR77 195 aa5.62□□□□□ -1.51
PHF3-210ENST00000509876 PCDHB7Q9Y5E2 793 aa5.62□□□□□ -1.51
PHF3-210ENST00000509876 CNTNAP5Q8WYK1 1306 aa5.62□□□□□ -1.51
PHF3-210ENST00000509876 CLDN3O15551 220 aa5.61□□□□□ -1.51
PHF3-210ENST00000509876 CAPN15O75808 1086 aa5.61□□□□□ -1.51
PHF3-210ENST00000509876 LARGE1O95461 756 aa5.61□□□□□ -1.51
PHF3-210ENST00000509876 TDP2O95551 362 aa5.61□□□□□ -1.51
PHF3-210ENST00000509876 CACNB1Q02641 598 aaPredicted RBP5.61□□□□□ -1.51
PHF3-210ENST00000509876 MOB2Q70IA6 237 aa5.61□□□□□ -1.51
PHF3-210ENST00000509876 ARMCX2Q7L311 632 aa5.61□□□□□ -1.51
PHF3-210ENST00000509876 DHTKD1Q96HY7 919 aaPredicted RBP5.61□□□□□ -1.51
PHF3-210ENST00000509876 GSDMAQ96QA5 445 aa5.61□□□□□ -1.51
PHF3-210ENST00000509876 ABHD16BQ9H3Z7 469 aa5.61□□□□□ -1.51
PHF3-210ENST00000509876 BTAF1O14981 1849 aa5.61□□□□□ -1.51
PHF3-210ENST00000509876 TYW5A2RUC4 315 aaKnown RBP5.61□□□□□ -1.51
PHF3-210ENST00000509876 POTEMA6NI47 508 aa5.61□□□□□ -1.51
PHF3-210ENST00000509876 DGAT1O75907 488 aa5.61□□□□□ -1.51
PHF3-210ENST00000509876 ADCY5O95622 1261 aa5.61□□□□□ -1.51
PHF3-210ENST00000509876 CTSHP09668 335 aa5.61□□□□□ -1.51
PHF3-210ENST00000509876 TCF7P36402 384 aaPredicted RBP5.61□□□□□ -1.51
PHF3-210ENST00000509876 MFAP3P55082 362 aa5.61□□□□□ -1.51
PHF3-210ENST00000509876 ANTXR2P58335 489 aa5.61□□□□□ -1.51
PHF3-210ENST00000509876 OSTNP61366 133 aa5.61□□□□□ -1.51
PHF3-210ENST00000509876 LACTBP83111 547 aaPredicted RBP5.61□□□□□ -1.51
PHF3-210ENST00000509876 BFSP1Q12934 665 aa5.61□□□□□ -1.51
PHF3-210ENST00000509876 MAP2K5Q13163 448 aa5.61□□□□□ -1.51
PHF3-210ENST00000509876 MORC3Q14149 939 aa5.61□□□□□ -1.51
PHF3-210ENST00000509876 ZNF746Q6NUN9 644 aaPredicted RBP5.61□□□□□ -1.51
PHF3-210ENST00000509876 PPP4R3CPQ6ZMV5 832 aa5.61□□□□□ -1.51
PHF3-210ENST00000509876 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.61□□□□□ -1.51
PHF3-210ENST00000509876 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.61□□□□□ -1.51
PHF3-210ENST00000509876 COL1A1P02452 1464 aaPredicted RBP5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms