RNA–Protein interactions for RNA: ENST00000509857.5

TRAPPC11-206, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-206ENST00000509857 PTPN1P18031 435 aaKnown RBP9.72□□□□□ -0.85
TRAPPC11-206ENST00000509857 ITGA1P56199 1179 aa9.72□□□□□ -0.85
TRAPPC11-206ENST00000509857 VWA3BQ502W6 1294 aa9.72□□□□□ -0.85
TRAPPC11-206ENST00000509857 SAPCD2Q86UD0 394 aa9.72□□□□□ -0.85
TRAPPC11-206ENST00000509857 LRRTM3Q86VH5 581 aa9.72□□□□□ -0.85
TRAPPC11-206ENST00000509857 PROSER1Q86XN7 944 aa9.72□□□□□ -0.85
TRAPPC11-206ENST00000509857 C11orf84Q9BUA3 381 aaPredicted RBP9.72□□□□□ -0.85
TRAPPC11-206ENST00000509857 FAM90A27PA6NNH2 459 aa9.71□□□□□ -0.86
TRAPPC11-206ENST00000509857 M0R2C6 588 aa9.71□□□□□ -0.86
TRAPPC11-206ENST00000509857 JMJD7P0C870 316 aa9.71□□□□□ -0.86
TRAPPC11-206ENST00000509857 AFF3P51826 1226 aaKnown RBP9.71□□□□□ -0.86
TRAPPC11-206ENST00000509857 DLX2Q07687 328 aaPredicted RBP9.71□□□□□ -0.86
TRAPPC11-206ENST00000509857 CDCA2Q69YH5 1023 aaPredicted RBP9.71□□□□□ -0.86
TRAPPC11-206ENST00000509857 UBE2R2Q712K3 238 aaPredicted RBP9.71□□□□□ -0.86
TRAPPC11-206ENST00000509857 DHX37Q8IY37 1157 aaKnown RBP9.71□□□□□ -0.86
TRAPPC11-206ENST00000509857 KYQ8NBH2 561 aa9.71□□□□□ -0.86
TRAPPC11-206ENST00000509857 WASF3Q9UPY6 502 aa9.71□□□□□ -0.86
TRAPPC11-206ENST00000509857 WDR62O43379 1518 aa9.71□□□□□ -0.86
TRAPPC11-206ENST00000509857 SLC12A8A0AV02 714 aa9.7□□□□□ -0.86
TRAPPC11-206ENST00000509857 CBX4O00257 560 aa9.7□□□□□ -0.86
TRAPPC11-206ENST00000509857 ARHGAP44Q17R89 818 aa9.7□□□□□ -0.86
TRAPPC11-206ENST00000509857 TAF7LQ5H9L4 462 aa9.7□□□□□ -0.86
TRAPPC11-206ENST00000509857 BTBD8Q5XKL5 378 aa9.7□□□□□ -0.86
TRAPPC11-206ENST00000509857 TTLL6Q8N841 843 aa9.7□□□□□ -0.86
TRAPPC11-206ENST00000509857 CHST14Q8NCH0 376 aa9.7□□□□□ -0.86
TRAPPC11-206ENST00000509857 DDX1Q92499 740 aaKnown RBP9.7□□□□□ -0.86
TRAPPC11-206ENST00000509857 TMEM209Q96SK2 561 aa9.7□□□□□ -0.86
TRAPPC11-206ENST00000509857 SYT3Q9BQG1 590 aa9.7□□□□□ -0.86
TRAPPC11-206ENST00000509857 IRF2BPLQ9H1B7 796 aa9.7□□□□□ -0.86
TRAPPC11-206ENST00000509857 IFT140Q96RY7 1462 aa9.7□□□□□ -0.86
TRAPPC11-206ENST00000509857 KRTAP9-6A0A140TA67 174 aa9.69□□□□□ -0.86
TRAPPC11-206ENST00000509857 C4BPAP04003 597 aaKnown RBP9.69□□□□□ -0.86
TRAPPC11-206ENST00000509857 GYS2P54840 703 aa9.69□□□□□ -0.86
TRAPPC11-206ENST00000509857 JAG1P78504 1218 aa9.69□□□□□ -0.86
TRAPPC11-206ENST00000509857 ADAM9Q13443 819 aa9.69□□□□□ -0.86
TRAPPC11-206ENST00000509857 PIK3R6Q5UE93 754 aa9.69□□□□□ -0.86
TRAPPC11-206ENST00000509857 TCERG1LQ5VWI1 586 aa9.69□□□□□ -0.86
TRAPPC11-206ENST00000509857 FSTL4Q6MZW2 842 aa9.69□□□□□ -0.86
TRAPPC11-206ENST00000509857 C2orf69Q8N8R5 385 aa9.69□□□□□ -0.86
TRAPPC11-206ENST00000509857 ZSCAN18Q8TBC5 510 aaPredicted RBP9.69□□□□□ -0.86
TRAPPC11-206ENST00000509857 BOCQ9BWV1 1114 aa9.69□□□□□ -0.86
TRAPPC11-206ENST00000509857 RRBP1Q9P2E9 1410 aaKnown RBP9.69□□□□□ -0.86
TRAPPC11-206ENST00000509857 TRAF5O00463 557 aa9.68□□□□□ -0.86
TRAPPC11-206ENST00000509857 KCNK3O14649 394 aa9.68□□□□□ -0.86
TRAPPC11-206ENST00000509857 FFAR3O14843 346 aa9.68□□□□□ -0.86
TRAPPC11-206ENST00000509857 SEC23AQ15436 765 aa9.68□□□□□ -0.86
TRAPPC11-206ENST00000509857 CFAP100Q494V2 611 aa9.68□□□□□ -0.86
TRAPPC11-206ENST00000509857 CD276Q5ZPR3 534 aa9.68□□□□□ -0.86
TRAPPC11-206ENST00000509857 EP400NLQ6ZTU2 488 aa9.68□□□□□ -0.86
TRAPPC11-206ENST00000509857 KIF18BQ86Y91 864 aa9.68□□□□□ -0.86
TRAPPC11-206ENST00000509857 DLG3Q92796 817 aa9.68□□□□□ -0.86
TRAPPC11-206ENST00000509857 ZBTB8AQ96BR9 441 aa9.68□□□□□ -0.86
TRAPPC11-206ENST00000509857 TARS2Q9BW92 718 aaKnown RBP9.68□□□□□ -0.86
TRAPPC11-206ENST00000509857 RIC8BQ9NVN3 520 aa9.68□□□□□ -0.86
TRAPPC11-206ENST00000509857 SPATA6Q9NWH7 488 aaPredicted RBP9.68□□□□□ -0.86
TRAPPC11-206ENST00000509857 B3GALT1Q9Y5Z6 326 aa9.68□□□□□ -0.86
TRAPPC11-206ENST00000509857 FYCO1Q9BQS8 1478 aa9.67□□□□□ -0.86
TRAPPC11-206ENST00000509857 FMN1Q68DA7 1419 aa9.67□□□□□ -0.86
TRAPPC11-206ENST00000509857 CLSPNQ9HAW4 1339 aa9.67□□□□□ -0.86
TRAPPC11-206ENST00000509857 SH3D21A4FU49 640 aa9.67□□□□□ -0.86
TRAPPC11-206ENST00000509857 GSG1L2A8MUP6 293 aa9.67□□□□□ -0.86
TRAPPC11-206ENST00000509857 ZBTB48P10074 688 aaPredicted RBP9.67□□□□□ -0.86
TRAPPC11-206ENST00000509857 THBS2P35442 1172 aa9.67□□□□□ -0.86
TRAPPC11-206ENST00000509857 DBPQ10586 325 aaPredicted RBP9.67□□□□□ -0.86
TRAPPC11-206ENST00000509857 KRTAP19-4Q3LI73 84 aa9.67□□□□□ -0.86
TRAPPC11-206ENST00000509857 EGFLAMQ63HQ2 1017 aa9.67□□□□□ -0.86
TRAPPC11-206ENST00000509857 LIPIQ6XZB0 460 aa9.67□□□□□ -0.86
TRAPPC11-206ENST00000509857 PPM1KQ8N3J5 372 aa9.67□□□□□ -0.86
TRAPPC11-206ENST00000509857 DTX3Q8N9I9 347 aa9.67□□□□□ -0.86
TRAPPC11-206ENST00000509857 LINC01356Q8N9X3 169 aa9.67□□□□□ -0.86
TRAPPC11-206ENST00000509857 WNK4Q96J92 1243 aa9.67□□□□□ -0.86
TRAPPC11-206ENST00000509857 MTFR1LQ9H019 292 aa9.67□□□□□ -0.86
TRAPPC11-206ENST00000509857 CABP5Q9NP86 173 aa9.67□□□□□ -0.86
TRAPPC11-206ENST00000509857 B4GALT6Q9UBX8 382 aa9.67□□□□□ -0.86
TRAPPC11-206ENST00000509857 TIAM1Q13009 1591 aa9.67□□□□□ -0.86
TRAPPC11-206ENST00000509857 THOC2Q8NI27 1593 aaKnown RBP9.67□□□□□ -0.86
TRAPPC11-206ENST00000509857 A0A087X0B3 334 aa9.66□□□□□ -0.86
TRAPPC11-206ENST00000509857 HERVK_113P62684 666 aa9.66□□□□□ -0.86
TRAPPC11-206ENST00000509857 PRR31Q5SQ13 230 aa9.66□□□□□ -0.86
TRAPPC11-206ENST00000509857 VASNQ6EMK4 673 aa9.66□□□□□ -0.86
TRAPPC11-206ENST00000509857 SIAH1Q8IUQ4 282 aa9.66□□□□□ -0.86
TRAPPC11-206ENST00000509857 SLKQ9H2G2 1235 aaPredicted RBP9.66□□□□□ -0.86
TRAPPC11-206ENST00000509857 KCNH7Q9NS40 1196 aa9.66□□□□□ -0.86
TRAPPC11-206ENST00000509857 RBPJLQ9UBG7 517 aa9.66□□□□□ -0.86
TRAPPC11-206ENST00000509857 SAMD9Q5K651 1589 aa9.66□□□□□ -0.86
TRAPPC11-206ENST00000509857 GRIN2BQ13224 1484 aa9.66□□□□□ -0.86
TRAPPC11-206ENST00000509857 CASKIN1Q8WXD9 1431 aa9.65□□□□□ -0.86
TRAPPC11-206ENST00000509857 CFAP43Q8NDM7 1665 aa9.65□□□□□ -0.86
TRAPPC11-206ENST00000509857 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.65□□□□□ -0.86
TRAPPC11-206ENST00000509857 SMARCA5O60264 1052 aaPredicted RBP9.65□□□□□ -0.86
TRAPPC11-206ENST00000509857 IRF9Q00978 393 aa9.65□□□□□ -0.86
TRAPPC11-206ENST00000509857 SMAD4Q13485 552 aaKnown RBP9.65□□□□□ -0.86
TRAPPC11-206ENST00000509857 CPZQ66K79 652 aa9.65□□□□□ -0.86
TRAPPC11-206ENST00000509857 CNNM4Q6P4Q7 775 aa9.65□□□□□ -0.86
TRAPPC11-206ENST00000509857 TMC5Q6UXY8 1006 aa9.65□□□□□ -0.86
TRAPPC11-206ENST00000509857 TP53I13Q8NBR0 393 aaPredicted RBP9.65□□□□□ -0.86
TRAPPC11-206ENST00000509857 WRNIP1Q96S55 665 aa9.65□□□□□ -0.86
TRAPPC11-206ENST00000509857 DLL4Q9NR61 685 aa9.65□□□□□ -0.86
TRAPPC11-206ENST00000509857 PBRM1Q86U86 1689 aa9.64□□□□□ -0.87
TRAPPC11-206ENST00000509857 ZNF839A8K0R7 811 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms