RNA–Protein interactions for RNA: ENST00000509601.1

TPM3-220, Transcript of tropomyosin 3, humanhuman

TSL 4

Gene TPM3, Length 543 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-220ENST00000509601 CTSHP09668 335 aa20.44■□□□□ 0.86
TPM3-220ENST00000509601 GNA11P29992 359 aa20.44■□□□□ 0.86
TPM3-220ENST00000509601 AKAP17AQ02040 695 aaKnown RBP20.44■□□□□ 0.86
TPM3-220ENST00000509601 PPFIA1Q13136 1202 aa20.44■□□□□ 0.86
TPM3-220ENST00000509601 GRIK4Q16099 956 aa20.44■□□□□ 0.86
TPM3-220ENST00000509601 PLPPR4Q7Z2D5 763 aa20.44■□□□□ 0.86
TPM3-220ENST00000509601 PLA2G4DQ86XP0 818 aa20.44■□□□□ 0.86
TPM3-220ENST00000509601 RASGRP4Q8TDF6 673 aa20.44■□□□□ 0.86
TPM3-220ENST00000509601 CERS4Q9HA82 394 aa20.44■□□□□ 0.86
TPM3-220ENST00000509601 CUL9Q8IWT3 2517 aa20.44■□□□□ 0.86
TPM3-220ENST00000509601 IGKV6D-21A0A0A0MT36 114 aa20.43■□□□□ 0.86
TPM3-220ENST00000509601 LCHNA4D1U4 455 aa20.43■□□□□ 0.86
TPM3-220ENST00000509601 EPOPA6NHQ4 379 aa20.43■□□□□ 0.86
TPM3-220ENST00000509601 TLL1O43897 1013 aa20.43■□□□□ 0.86
TPM3-220ENST00000509601 EFCAB14O75071 495 aa20.43■□□□□ 0.86
TPM3-220ENST00000509601 GJB5O95377 273 aa20.43■□□□□ 0.86
TPM3-220ENST00000509601 CCNE2O96020 404 aa20.43■□□□□ 0.86
TPM3-220ENST00000509601 CHRNA1P02708 482 aa20.43■□□□□ 0.86
TPM3-220ENST00000509601 INSRRP14616 1297 aa20.43■□□□□ 0.86
TPM3-220ENST00000509601 MCTP2Q6DN12 878 aa20.43■□□□□ 0.86
TPM3-220ENST00000509601 SPRED2Q7Z698 418 aa20.43■□□□□ 0.86
TPM3-220ENST00000509601 REXO1Q8N1G1 1221 aaKnown RBP20.43■□□□□ 0.86
TPM3-220ENST00000509601 VPS54Q9P1Q0 977 aa20.43■□□□□ 0.86
TPM3-220ENST00000509601 IGFBP4P22692 258 aa20.42■□□□□ 0.86
TPM3-220ENST00000509601 STAT5BP51692 787 aa20.42■□□□□ 0.86
TPM3-220ENST00000509601 PLCB4Q15147 1175 aa20.42■□□□□ 0.86
TPM3-220ENST00000509601 ABHD15Q6UXT9 468 aa20.42■□□□□ 0.86
TPM3-220ENST00000509601 ZBTB10Q96DT7 871 aa20.42■□□□□ 0.86
TPM3-220ENST00000509601 UIMC1Q96RL1 719 aa20.42■□□□□ 0.86
TPM3-220ENST00000509601 PRDM6Q9NQX0 595 aa20.42■□□□□ 0.86
TPM3-220ENST00000509601 PDRG1Q9NUG6 133 aa20.42■□□□□ 0.86
TPM3-220ENST00000509601 POU3F3P20264 500 aaPredicted RBP20.41■□□□□ 0.86
TPM3-220ENST00000509601 CIITAP33076 1130 aa20.41■□□□□ 0.86
TPM3-220ENST00000509601 MGAT3Q09327 533 aa20.41■□□□□ 0.86
TPM3-220ENST00000509601 TAF2Q6P1X5 1199 aa20.41■□□□□ 0.86
TPM3-220ENST00000509601 PPM1EQ8WY54 764 aa20.41■□□□□ 0.86
TPM3-220ENST00000509601 SEPT8Q92599 483 aa20.41■□□□□ 0.86
TPM3-220ENST00000509601 RAD9AQ99638 391 aa20.41■□□□□ 0.86
TPM3-220ENST00000509601 ZBED2Q9BTP6 218 aa20.41■□□□□ 0.86
TPM3-220ENST00000509601 AZI2Q9H6S1 392 aa20.41■□□□□ 0.86
TPM3-220ENST00000509601 SH3GLB2Q9NR46 395 aa20.41■□□□□ 0.86
TPM3-220ENST00000509601 TRANK1O15050 2925 aa20.41■□□□□ 0.86
TPM3-220ENST00000509601 RRN3P2A6NIE6 340 aa20.4■□□□□ 0.86
TPM3-220ENST00000509601 DDX39AO00148 427 aaKnown RBP20.4■□□□□ 0.86
TPM3-220ENST00000509601 IGBP1P78318 339 aa20.4■□□□□ 0.86
TPM3-220ENST00000509601 SSRP1Q08945 709 aaKnown RBP20.4■□□□□ 0.86
TPM3-220ENST00000509601 CCDC85BQ15834 202 aaPredicted RBP20.4■□□□□ 0.86
TPM3-220ENST00000509601 DNAJB3Q8WWF6 145 aa20.4■□□□□ 0.86
TPM3-220ENST00000509601 COL25A1Q9BXS0 654 aaPredicted RBP20.4■□□□□ 0.86
TPM3-220ENST00000509601 TUBE1Q9UJT0 475 aa20.4■□□□□ 0.86
TPM3-220ENST00000509601 PRRC2BQ5JSZ5 2229 aaKnown RBP20.39■□□□□ 0.86
TPM3-220ENST00000509601 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.39■□□□□ 0.85
TPM3-220ENST00000509601 IPO5O00410 1097 aaKnown RBP20.39■□□□□ 0.85
TPM3-220ENST00000509601 STK3Q13188 491 aa20.39■□□□□ 0.85
TPM3-220ENST00000509601 FAM117BQ6P1L5 589 aa20.39■□□□□ 0.85
TPM3-220ENST00000509601 CCDC148Q8NFR7 591 aa20.39■□□□□ 0.85
TPM3-220ENST00000509601 BICD2Q8TD16 824 aa20.39■□□□□ 0.85
TPM3-220ENST00000509601 ARNTL2Q8WYA1 636 aa20.39■□□□□ 0.85
TPM3-220ENST00000509601 LENG9Q96B70 501 aa20.39■□□□□ 0.85
TPM3-220ENST00000509601 ATP4AP20648 1035 aa20.38■□□□□ 0.85
TPM3-220ENST00000509601 NLRP5P59047 1200 aa20.38■□□□□ 0.85
TPM3-220ENST00000509601 HTRA4P83105 476 aaPredicted RBP20.38■□□□□ 0.85
TPM3-220ENST00000509601 TRIM22Q8IYM9 498 aa20.38■□□□□ 0.85
TPM3-220ENST00000509601 TRAPPC12Q8WVT3 735 aa20.38■□□□□ 0.85
TPM3-220ENST00000509601 TOP1MTQ969P6 601 aa20.38■□□□□ 0.85
TPM3-220ENST00000509601 ZNF577Q9BSK1 485 aa20.38■□□□□ 0.85
TPM3-220ENST00000509601 TBC1D22BQ9NU19 505 aa20.38■□□□□ 0.85
TPM3-220ENST00000509601 PCDHA2Q9Y5H9 948 aa20.38■□□□□ 0.85
TPM3-220ENST00000509601 MTCH2Q9Y6C9 303 aa20.38■□□□□ 0.85
TPM3-220ENST00000509601 REV3LO60673 3130 aa20.38■□□□□ 0.85
TPM3-220ENST00000509601 MICAL3Q7RTP6 2002 aa20.37■□□□□ 0.85
TPM3-220ENST00000509601 POTEB3A0JP26 581 aa20.37■□□□□ 0.85
TPM3-220ENST00000509601 M0R2N6 131 aa20.37■□□□□ 0.85
TPM3-220ENST00000509601 LPXNO60711 386 aa20.37■□□□□ 0.85
TPM3-220ENST00000509601 DEXIO95424 95 aa20.37■□□□□ 0.85
TPM3-220ENST00000509601 AMHP03971 560 aa20.37■□□□□ 0.85
TPM3-220ENST00000509601 USP11P51784 963 aa20.37■□□□□ 0.85
TPM3-220ENST00000509601 LPIN1Q14693 890 aa20.37■□□□□ 0.85
TPM3-220ENST00000509601 NPY5RQ15761 445 aa20.37■□□□□ 0.85
TPM3-220ENST00000509601 PRR16Q569H4 304 aa20.37■□□□□ 0.85
TPM3-220ENST00000509601 SWSAP1Q6NVH7 229 aa20.37■□□□□ 0.85
TPM3-220ENST00000509601 POTEBQ6S5H4 581 aa20.37■□□□□ 0.85
TPM3-220ENST00000509601 RSPH3Q86UC2 560 aa20.37■□□□□ 0.85
TPM3-220ENST00000509601 CCDC60Q8IWA6 550 aaPredicted RBP20.37■□□□□ 0.85
TPM3-220ENST00000509601 MYOCDQ8IZQ8 938 aa20.37■□□□□ 0.85
TPM3-220ENST00000509601 TNPO1Q92973 898 aaKnown RBP20.37■□□□□ 0.85
TPM3-220ENST00000509601 AIFM3Q96NN9 605 aa20.37■□□□□ 0.85
TPM3-220ENST00000509601 TPCN1Q9ULQ1 816 aa20.37■□□□□ 0.85
TPM3-220ENST00000509601 PCDHA4Q9UN74 947 aa20.37■□□□□ 0.85
TPM3-220ENST00000509601 TRPC6Q9Y210 931 aa20.37■□□□□ 0.85
TPM3-220ENST00000509601 LINC01553A4QN01 128 aa20.36■□□□□ 0.85
TPM3-220ENST00000509601 CPLX1O14810 134 aa20.36■□□□□ 0.85
TPM3-220ENST00000509601 GHRP10912 638 aa20.36■□□□□ 0.85
TPM3-220ENST00000509601 SLC26A2P50443 739 aa20.36■□□□□ 0.85
TPM3-220ENST00000509601 ANAPC15P60006 121 aa20.36■□□□□ 0.85
TPM3-220ENST00000509601 ERVK-21P61565 698 aa20.36■□□□□ 0.85
TPM3-220ENST00000509601 SETQ01105 290 aaPredicted RBP20.36■□□□□ 0.85
TPM3-220ENST00000509601 SCRN1Q12765 414 aa20.36■□□□□ 0.85
TPM3-220ENST00000509601 FBXO47Q5MNV8 452 aa20.36■□□□□ 0.85
TPM3-220ENST00000509601 KRT40Q6A162 431 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms