RNA–Protein interactions for RNA: ENST00000509552.5

CCHCR1-228, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 1 (best)

Gene CCHCR1, Length 2,304 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-228ENST00000509552 SH3BP5LQ7L8J4 393 aa19.73■□□□□ 0.75
CCHCR1-228ENST00000509552 KRT27Q7Z3Y8 459 aa19.73■□□□□ 0.75
CCHCR1-228ENST00000509552 FRMD5Q7Z6J6 570 aa19.73■□□□□ 0.75
CCHCR1-228ENST00000509552 FAM204AQ9H8W3 233 aa19.73■□□□□ 0.75
CCHCR1-228ENST00000509552 ARMCX3Q9UH62 379 aaPredicted RBP19.73■□□□□ 0.75
CCHCR1-228ENST00000509552 HDAC9Q9UKV0 1011 aa19.73■□□□□ 0.75
CCHCR1-228ENST00000509552 MEIS1O00470 390 aa19.72■□□□□ 0.75
CCHCR1-228ENST00000509552 GDF11O95390 407 aa19.72■□□□□ 0.75
CCHCR1-228ENST00000509552 NDUFB10O96000 172 aa19.72■□□□□ 0.75
CCHCR1-228ENST00000509552 PSMC6P62333 389 aa19.72■□□□□ 0.75
CCHCR1-228ENST00000509552 ARID5AQ03989 594 aa19.72■□□□□ 0.75
CCHCR1-228ENST00000509552 NAB2Q15742 525 aa19.72■□□□□ 0.75
CCHCR1-228ENST00000509552 AENQ8WTP8 325 aaKnown RBP19.72■□□□□ 0.75
CCHCR1-228ENST00000509552 REEP2Q9BRK0 252 aa19.72■□□□□ 0.75
CCHCR1-228ENST00000509552 NRXN2Q9P2S2 1712 aa19.72■□□□□ 0.75
CCHCR1-228ENST00000509552 SPATA31C1P0DKV0 1188 aa19.71■□□□□ 0.75
CCHCR1-228ENST00000509552 DACT2Q5SW24 774 aa19.71■□□□□ 0.75
CCHCR1-228ENST00000509552 FAM133AQ8N9E0 248 aa19.71■□□□□ 0.75
CCHCR1-228ENST00000509552 P2RX7Q99572 595 aaKnown RBP19.71■□□□□ 0.75
CCHCR1-228ENST00000509552 GANQ9H2C0 597 aa19.71■□□□□ 0.75
CCHCR1-228ENST00000509552 QTRT2Q9H974 415 aaKnown RBP19.71■□□□□ 0.75
CCHCR1-228ENST00000509552 SIPA1L1O43166 1804 aa19.71■□□□□ 0.75
CCHCR1-228ENST00000509552 FAM86B1E9PN63 330 aa19.71■□□□□ 0.75
CCHCR1-228ENST00000509552 FAM86B2P0C5J1 330 aa19.71■□□□□ 0.75
CCHCR1-228ENST00000509552 BMP3P12645 472 aa19.71■□□□□ 0.75
CCHCR1-228ENST00000509552 ZNF76P36508 570 aa19.71■□□□□ 0.75
CCHCR1-228ENST00000509552 CASP5P51878 434 aa19.71■□□□□ 0.75
CCHCR1-228ENST00000509552 SFR1Q86XK3 245 aa19.71■□□□□ 0.75
CCHCR1-228ENST00000509552 COL23A1Q86Y22 540 aaPredicted RBP19.71■□□□□ 0.75
CCHCR1-228ENST00000509552 AFAP1L1Q8TED9 768 aa19.71■□□□□ 0.75
CCHCR1-228ENST00000509552 LENG9Q96B70 501 aa19.71■□□□□ 0.75
CCHCR1-228ENST00000509552 SERPINA10Q9UK55 444 aa19.71■□□□□ 0.75
CCHCR1-228ENST00000509552 PDXKO00764 312 aa19.7■□□□□ 0.74
CCHCR1-228ENST00000509552 PALMO75781 387 aa19.7■□□□□ 0.74
CCHCR1-228ENST00000509552 AFPP02771 609 aaKnown RBP19.7■□□□□ 0.74
CCHCR1-228ENST00000509552 CIITAP33076 1130 aa19.7■□□□□ 0.74
CCHCR1-228ENST00000509552 MMP14P50281 582 aa19.7■□□□□ 0.74
CCHCR1-228ENST00000509552 APBA1Q02410 837 aa19.7■□□□□ 0.74
CCHCR1-228ENST00000509552 EZH2Q15910 746 aaKnown RBP19.7■□□□□ 0.74
CCHCR1-228ENST00000509552 GLE1Q53GS7 698 aaKnown RBP19.7■□□□□ 0.74
CCHCR1-228ENST00000509552 C8orf74Q6P047 294 aa19.7■□□□□ 0.74
CCHCR1-228ENST00000509552 STIM2Q9P246 746 aa19.7■□□□□ 0.74
CCHCR1-228ENST00000509552 ADAMTS1Q9UHI8 967 aa19.7■□□□□ 0.74
CCHCR1-228ENST00000509552 DMGDHQ9UI17 866 aaKnown RBP19.7■□□□□ 0.74
CCHCR1-228ENST00000509552 ECE2O60344 883 aa19.7■□□□□ 0.74
CCHCR1-228ENST00000509552 MMP10P09238 476 aa19.7■□□□□ 0.74
CCHCR1-228ENST00000509552 KIAA0753Q2KHM9 967 aa19.7■□□□□ 0.74
CCHCR1-228ENST00000509552 RBM26Q5T8P6 1007 aaKnown RBP19.7■□□□□ 0.74
CCHCR1-228ENST00000509552 EPM2AIP1Q7L775 607 aaPredicted RBP19.7■□□□□ 0.74
CCHCR1-228ENST00000509552 HDAC7Q8WUI4 952 aa19.7■□□□□ 0.74
CCHCR1-228ENST00000509552 SPAG5Q96R06 1193 aa19.7■□□□□ 0.74
CCHCR1-228ENST00000509552 PLCB1Q9NQ66 1216 aa19.7■□□□□ 0.74
CCHCR1-228ENST00000509552 ZC3H4Q9UPT8 1303 aaKnown RBP19.69■□□□□ 0.74
CCHCR1-228ENST00000509552 A0A087X0T9 212 aa19.69■□□□□ 0.74
CCHCR1-228ENST00000509552 GOLGA6BA6NDN3 693 aa19.69■□□□□ 0.74
CCHCR1-228ENST00000509552 MSH4O15457 936 aa19.69■□□□□ 0.74
CCHCR1-228ENST00000509552 TBCAO75347 108 aaKnown RBP19.69■□□□□ 0.74
CCHCR1-228ENST00000509552 FAM228BP0C875 321 aa19.69■□□□□ 0.74
CCHCR1-228ENST00000509552 XRCC5P13010 732 aaKnown RBP19.69■□□□□ 0.74
CCHCR1-228ENST00000509552 RPL13P26373 211 aaKnown RBP19.69■□□□□ 0.74
CCHCR1-228ENST00000509552 GGCXP38435 758 aa19.69■□□□□ 0.74
CCHCR1-228ENST00000509552 ENOX2Q16206 610 aaKnown RBP19.69■□□□□ 0.74
CCHCR1-228ENST00000509552 C10orf76Q5T2E6 689 aa19.69■□□□□ 0.74
CCHCR1-228ENST00000509552 KCTD17Q8N5Z5 321 aa19.69■□□□□ 0.74
CCHCR1-228ENST00000509552 SMARCAL1Q9NZC9 954 aa19.69■□□□□ 0.74
CCHCR1-228ENST00000509552 EHD2Q9NZN4 543 aa19.69■□□□□ 0.74
CCHCR1-228ENST00000509552 BZW2Q9Y6E2 419 aaKnown RBP19.69■□□□□ 0.74
CCHCR1-228ENST00000509552 ATAD5Q96QE3 1844 aa19.69■□□□□ 0.74
CCHCR1-228ENST00000509552 PRPF6O94906 941 aaKnown RBP19.69■□□□□ 0.74
CCHCR1-228ENST00000509552 IVLP07476 585 aa19.69■□□□□ 0.74
CCHCR1-228ENST00000509552 KLRC1P26715 233 aa19.69■□□□□ 0.74
CCHCR1-228ENST00000509552 EPHB4P54760 987 aa19.69■□□□□ 0.74
CCHCR1-228ENST00000509552 SND1Q7KZF4 910 aaKnown RBP eCLIP19.69■□□□□ 0.74
CCHCR1-228ENST00000509552 POLR3CQ9BUI4 534 aaPredicted RBP19.69■□□□□ 0.74
CCHCR1-228ENST00000509552 METTL14Q9HCE5 456 aaKnown RBP19.69■□□□□ 0.74
CCHCR1-228ENST00000509552 MYBP10242 640 aa19.68■□□□□ 0.74
CCHCR1-228ENST00000509552 SLC7A5Q01650 507 aa19.68■□□□□ 0.74
CCHCR1-228ENST00000509552 CYP4A11Q02928 519 aa19.68■□□□□ 0.74
CCHCR1-228ENST00000509552 EXOC3L4Q17RC7 722 aa19.68■□□□□ 0.74
CCHCR1-228ENST00000509552 HINFPQ9BQA5 517 aa19.68■□□□□ 0.74
CCHCR1-228ENST00000509552 BHMT2Q9H2M3 363 aa19.68■□□□□ 0.74
CCHCR1-228ENST00000509552 TYW1Q9NV66 732 aaKnown RBP19.68■□□□□ 0.74
CCHCR1-228ENST00000509552 RABGAP1Q9Y3P9 1069 aa19.68■□□□□ 0.74
CCHCR1-228ENST00000509552 PCDHGC5Q9Y5F6 944 aa19.68■□□□□ 0.74
CCHCR1-228ENST00000509552 GH2P01242 217 aa19.68■□□□□ 0.74
CCHCR1-228ENST00000509552 CYP3A4P08684 503 aa19.68■□□□□ 0.74
CCHCR1-228ENST00000509552 HOXA13P31271 388 aaPredicted RBP19.68■□□□□ 0.74
CCHCR1-228ENST00000509552 TRAF1Q13077 416 aa19.68■□□□□ 0.74
CCHCR1-228ENST00000509552 BTNL9Q6UXG8 535 aa19.68■□□□□ 0.74
CCHCR1-228ENST00000509552 EIF2AK1Q9BQI3 630 aaKnown RBP19.68■□□□□ 0.74
CCHCR1-228ENST00000509552 RBM12Q9NTZ6 932 aaKnown RBP19.68■□□□□ 0.74
CCHCR1-228ENST00000509552 VAV3Q9UKW4 847 aa19.68■□□□□ 0.74
CCHCR1-228ENST00000509552 EYA4O95677 639 aa19.67■□□□□ 0.74
CCHCR1-228ENST00000509552 EPB41P11171 864 aaKnown RBP19.67■□□□□ 0.74
CCHCR1-228ENST00000509552 BMT2Q1RMZ1 405 aa19.67■□□□□ 0.74
CCHCR1-228ENST00000509552 DCAF17Q5H9S7 520 aaPredicted RBP19.67■□□□□ 0.74
CCHCR1-228ENST00000509552 EMBQ6PCB8 327 aa19.67■□□□□ 0.74
CCHCR1-228ENST00000509552 EP400Q96L91 3159 aa19.67■□□□□ 0.74
CCHCR1-228ENST00000509552 COL11A2P13942 1736 aaPredicted RBP19.67■□□□□ 0.74
CCHCR1-228ENST00000509552 GRID2IPA4D2P6 1211 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms