RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 CCDC196A0A1B0GTZ2 297 aa17.56■□□□□ 0.4
TPM3-219ENST00000509409 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.56■□□□□ 0.4
TPM3-219ENST00000509409 hCG_1984214I3L0E3 225 aa17.56■□□□□ 0.4
TPM3-219ENST00000509409 ARP10275 920 aa17.56■□□□□ 0.4
TPM3-219ENST00000509409 INSRRP14616 1297 aa17.56■□□□□ 0.4
TPM3-219ENST00000509409 CPA1P15085 419 aa17.56■□□□□ 0.4
TPM3-219ENST00000509409 CDC27P30260 824 aa17.56■□□□□ 0.4
TPM3-219ENST00000509409 ADD1P35611 737 aaKnown RBP17.56■□□□□ 0.4
TPM3-219ENST00000509409 METAP2P50579 478 aaKnown RBP eCLIP17.56■□□□□ 0.4
TPM3-219ENST00000509409 APOBRQ0VD83 1088 aa17.56■□□□□ 0.4
TPM3-219ENST00000509409 MKRN4PQ13434 485 aaPredicted RBP17.56■□□□□ 0.4
TPM3-219ENST00000509409 CEP55Q53EZ4 464 aa17.56■□□□□ 0.4
TPM3-219ENST00000509409 Q6ZUG5 572 aa17.56■□□□□ 0.4
TPM3-219ENST00000509409 RPAINQ86UA6 219 aa17.56■□□□□ 0.4
TPM3-219ENST00000509409 ZNF713Q8N859 430 aaPredicted RBP17.56■□□□□ 0.4
TPM3-219ENST00000509409 JAKMIP1Q96N16 626 aaKnown RBP17.56■□□□□ 0.4
TPM3-219ENST00000509409 NECAB3Q96P71 396 aaPredicted RBP17.56■□□□□ 0.4
TPM3-219ENST00000509409 FAM217BQ9NTX9 383 aaPredicted RBP17.56■□□□□ 0.4
TPM3-219ENST00000509409 STAT5BP51692 787 aa17.55■□□□□ 0.4
TPM3-219ENST00000509409 ACTR2P61160 394 aa17.55■□□□□ 0.4
TPM3-219ENST00000509409 AP3B2Q13367 1082 aa17.55■□□□□ 0.4
TPM3-219ENST00000509409 EPC2Q52LR7 807 aa17.55■□□□□ 0.4
TPM3-219ENST00000509409 JAKMIP3Q5VZ66 844 aa17.55■□□□□ 0.4
TPM3-219ENST00000509409 TEX2Q8IWB9 1127 aa17.55■□□□□ 0.4
TPM3-219ENST00000509409 CCDC136Q96JN2 1154 aa17.55■□□□□ 0.4
TPM3-219ENST00000509409 SAMD11Q96NU1 681 aa17.55■□□□□ 0.4
TPM3-219ENST00000509409 PCYT2Q99447 389 aa17.55■□□□□ 0.4
TPM3-219ENST00000509409 FAM49AQ9H0Q0 323 aaPredicted RBP17.55■□□□□ 0.4
TPM3-219ENST00000509409 AGO4Q9HCK5 861 aaKnown RBP17.55■□□□□ 0.4
TPM3-219ENST00000509409 RNF216Q9NWF9 866 aaPredicted RBP17.55■□□□□ 0.4
TPM3-219ENST00000509409 CDY2AQ9Y6F7 541 aa17.55■□□□□ 0.4
TPM3-219ENST00000509409 NFASCO94856 1347 aa17.54■□□□□ 0.4
TPM3-219ENST00000509409 MBLAC1A4D2B0 266 aaPredicted RBP17.54■□□□□ 0.4
TPM3-219ENST00000509409 AKAP17AQ02040 695 aaKnown RBP17.54■□□□□ 0.4
TPM3-219ENST00000509409 MGAT3Q09327 533 aa17.54■□□□□ 0.4
TPM3-219ENST00000509409 LPIN1Q14693 890 aa17.54■□□□□ 0.4
TPM3-219ENST00000509409 PTPROQ16827 1216 aa17.54■□□□□ 0.4
TPM3-219ENST00000509409 MARCH8Q5T0T0 291 aa17.54■□□□□ 0.4
TPM3-219ENST00000509409 IER5Q5VY09 327 aa17.54■□□□□ 0.4
TPM3-219ENST00000509409 BLOC1S2Q6QNY1 142 aa17.54■□□□□ 0.4
TPM3-219ENST00000509409 SP7Q8TDD2 431 aaPredicted RBP17.54■□□□□ 0.4
TPM3-219ENST00000509409 BRF1Q92994 677 aa17.54■□□□□ 0.4
TPM3-219ENST00000509409 ZBTB10Q96DT7 871 aa17.54■□□□□ 0.4
TPM3-219ENST00000509409 IL17RAQ96F46 866 aa17.54■□□□□ 0.4
TPM3-219ENST00000509409 M0QZ92 97 aa17.53■□□□□ 0.4
TPM3-219ENST00000509409 DDX39AO00148 427 aaKnown RBP17.53■□□□□ 0.4
TPM3-219ENST00000509409 MEIS1O00470 390 aa17.53■□□□□ 0.4
TPM3-219ENST00000509409 ENPP3O14638 875 aa17.53■□□□□ 0.4
TPM3-219ENST00000509409 BACH1O14867 736 aa17.53■□□□□ 0.4
TPM3-219ENST00000509409 RPLP2P05387 115 aaKnown RBP17.53■□□□□ 0.4
TPM3-219ENST00000509409 SREBF1P36956 1147 aa17.53■□□□□ 0.4
TPM3-219ENST00000509409 RCAN1P53805 252 aa17.53■□□□□ 0.4
TPM3-219ENST00000509409 MRPS6P82932 125 aaKnown RBP17.53■□□□□ 0.4
TPM3-219ENST00000509409 GPM6BQ13491 265 aa17.53■□□□□ 0.4
TPM3-219ENST00000509409 PLCB4Q15147 1175 aa17.53■□□□□ 0.4
TPM3-219ENST00000509409 PFKFB3Q16875 520 aaPredicted RBP17.53■□□□□ 0.4
TPM3-219ENST00000509409 PLPPR4Q7Z2D5 763 aa17.53■□□□□ 0.4
TPM3-219ENST00000509409 PLA2G4DQ86XP0 818 aa17.53■□□□□ 0.4
TPM3-219ENST00000509409 TMEM192Q8IY95 271 aa17.53■□□□□ 0.4
TPM3-219ENST00000509409 FIBCD1Q8N539 461 aa17.53■□□□□ 0.4
TPM3-219ENST00000509409 POTEB3A0JP26 581 aa17.52■□□□□ 0.4
TPM3-219ENST00000509409 SCG2P13521 617 aa17.52■□□□□ 0.4
TPM3-219ENST00000509409 CLK2P49760 499 aaKnown RBP17.52■□□□□ 0.4
TPM3-219ENST00000509409 TMEM62Q0P6H9 643 aa17.52■□□□□ 0.4
TPM3-219ENST00000509409 ITGB3BPQ13352 177 aaPredicted RBP17.52■□□□□ 0.4
TPM3-219ENST00000509409 FBXO47Q5MNV8 452 aa17.52■□□□□ 0.4
TPM3-219ENST00000509409 POTEBQ6S5H4 581 aa17.52■□□□□ 0.4
TPM3-219ENST00000509409 TSHZ1Q6ZSZ6 1077 aa17.52■□□□□ 0.4
TPM3-219ENST00000509409 CCDC12Q8WUD4 166 aaPredicted RBP17.52■□□□□ 0.4
TPM3-219ENST00000509409 TRAPPC12Q8WVT3 735 aa17.52■□□□□ 0.4
TPM3-219ENST00000509409 UIMC1Q96RL1 719 aa17.52■□□□□ 0.4
TPM3-219ENST00000509409 C6orf50Q9HD87 102 aa17.52■□□□□ 0.4
TPM3-219ENST00000509409 SNX14Q9Y5W7 946 aa17.52■□□□□ 0.4
TPM3-219ENST00000509409 TRANK1O15050 2925 aa17.52■□□□□ 0.4
TPM3-219ENST00000509409 DOCK5Q9H7D0 1870 aa17.52■□□□□ 0.39
TPM3-219ENST00000509409 PSMA5P28066 241 aa17.51■□□□□ 0.39
TPM3-219ENST00000509409 CD52P31358 61 aa17.51■□□□□ 0.39
TPM3-219ENST00000509409 HSPA4P34932 840 aa17.51■□□□□ 0.39
TPM3-219ENST00000509409 FAM160B1Q5W0V3 765 aa17.51■□□□□ 0.39
TPM3-219ENST00000509409 NIPA1Q7RTP0 329 aa17.51■□□□□ 0.39
TPM3-219ENST00000509409 KCNB2Q92953 911 aa17.51■□□□□ 0.39
TPM3-219ENST00000509409 MRPL38Q96DV4 380 aaKnown RBP17.51■□□□□ 0.39
TPM3-219ENST00000509409 PCDHA2Q9Y5H9 948 aa17.51■□□□□ 0.39
TPM3-219ENST00000509409 TRPV2Q9Y5S1 764 aa17.51■□□□□ 0.39
TPM3-219ENST00000509409 PTPRSQ13332 1948 aa17.51■□□□□ 0.39
TPM3-219ENST00000509409 XIRP2A4UGR9 3374 aa17.5■□□□□ 0.39
TPM3-219ENST00000509409 H3BNC9 293 aa17.5■□□□□ 0.39
TPM3-219ENST00000509409 PRPF3O43395 683 aaKnown RBP17.5■□□□□ 0.39
TPM3-219ENST00000509409 ATG7O95352 703 aa17.5■□□□□ 0.39
TPM3-219ENST00000509409 GNA11P29992 359 aa17.5■□□□□ 0.39
TPM3-219ENST00000509409 CTNNB1P35222 781 aa17.5■□□□□ 0.39
TPM3-219ENST00000509409 MCTP2Q6DN12 878 aa17.5■□□□□ 0.39
TPM3-219ENST00000509409 MIS18BP1Q6P0N0 1132 aa17.5■□□□□ 0.39
TPM3-219ENST00000509409 NME8Q8N427 588 aa17.5■□□□□ 0.39
TPM3-219ENST00000509409 UBE2ZQ9H832 354 aaPredicted RBP17.5■□□□□ 0.39
TPM3-219ENST00000509409 TCEAL9Q9UHQ7 104 aa17.5■□□□□ 0.39
TPM3-219ENST00000509409 REV3LO60673 3130 aa17.49■□□□□ 0.39
TPM3-219ENST00000509409 FAM86B1E9PN63 330 aa17.49■□□□□ 0.39
TPM3-219ENST00000509409 HBP1O60381 514 aa17.49■□□□□ 0.39
TPM3-219ENST00000509409 PPFIA3O75145 1194 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms