RNA–Protein interactions for RNA: ENST00000509293.1

SPOCK1-206, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1, humanhuman

TSL 4

Gene SPOCK1, Length 553 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK1-206ENST00000509293 ATP6V0A1Q93050 837 aa16.05■□□□□ 0.16
SPOCK1-206ENST00000509293 PNMA5Q96PV4 448 aa16.05■□□□□ 0.16
SPOCK1-206ENST00000509293 UPF3AQ9H1J1 476 aaKnown RBP16.05■□□□□ 0.16
SPOCK1-206ENST00000509293 MAGEF1Q9HAY2 307 aa16.05■□□□□ 0.16
SPOCK1-206ENST00000509293 IGSF9BQ9UPX0 1349 aa16.04■□□□□ 0.16
SPOCK1-206ENST00000509293 A0A087X0B3 334 aa16.04■□□□□ 0.16
SPOCK1-206ENST00000509293 POTEFA5A3E0 1075 aa16.04■□□□□ 0.16
SPOCK1-206ENST00000509293 POLR2DO15514 142 aaKnown RBP16.04■□□□□ 0.16
SPOCK1-206ENST00000509293 NR1I2O75469 434 aa16.04■□□□□ 0.16
SPOCK1-206ENST00000509293 SLFN14P0C7P3 912 aa16.04■□□□□ 0.16
SPOCK1-206ENST00000509293 PLCG1P19174 1290 aa16.04■□□□□ 0.16
SPOCK1-206ENST00000509293 SLC26A2P50443 739 aa16.04■□□□□ 0.16
SPOCK1-206ENST00000509293 GJA9P57773 515 aa16.04■□□□□ 0.16
SPOCK1-206ENST00000509293 BRDTQ58F21 947 aaPredicted RBP16.04■□□□□ 0.16
SPOCK1-206ENST00000509293 TMEM63BQ5T3F8 832 aa16.04■□□□□ 0.16
SPOCK1-206ENST00000509293 GJC2Q5T442 439 aaPredicted RBP16.04■□□□□ 0.16
SPOCK1-206ENST00000509293 RRAGBQ5VZM2 374 aa16.04■□□□□ 0.16
SPOCK1-206ENST00000509293 FAM160B1Q5W0V3 765 aa16.04■□□□□ 0.16
SPOCK1-206ENST00000509293 FBXO46Q6PJ61 603 aaPredicted RBP16.04■□□□□ 0.16
SPOCK1-206ENST00000509293 PLPPR4Q7Z2D5 763 aa16.04■□□□□ 0.16
SPOCK1-206ENST00000509293 OR6J1Q8NGC5 347 aa16.04■□□□□ 0.16
SPOCK1-206ENST00000509293 RASSF8Q8NHQ8 419 aa16.04■□□□□ 0.16
SPOCK1-206ENST00000509293 DYDC2Q96IM9 177 aa16.04■□□□□ 0.16
SPOCK1-206ENST00000509293 CDK5RAP3Q96JB5 506 aa16.04■□□□□ 0.16
SPOCK1-206ENST00000509293 LXNQ9BS40 222 aa16.04■□□□□ 0.16
SPOCK1-206ENST00000509293 AP5M1Q9H0R1 490 aa16.04■□□□□ 0.16
SPOCK1-206ENST00000509293 DDX19AQ9NUU7 478 aaKnown RBP16.04■□□□□ 0.16
SPOCK1-206ENST00000509293 DACT1Q9NYF0 836 aa16.04■□□□□ 0.16
SPOCK1-206ENST00000509293 RGL1Q9NZL6 768 aa16.04■□□□□ 0.16
SPOCK1-206ENST00000509293 MAFBQ9Y5Q3 323 aaPredicted RBP16.04■□□□□ 0.16
SPOCK1-206ENST00000509293 PCNTO95613 3336 aa16.03■□□□□ 0.16
SPOCK1-206ENST00000509293 DYNC1LI2O43237 492 aaPredicted RBP16.03■□□□□ 0.16
SPOCK1-206ENST00000509293 KINO60870 393 aaKnown RBP16.03■□□□□ 0.16
SPOCK1-206ENST00000509293 RARBP10826 455 aa16.03■□□□□ 0.16
SPOCK1-206ENST00000509293 CCND3P30281 292 aaPredicted RBP16.03■□□□□ 0.16
SPOCK1-206ENST00000509293 TCF7P36402 384 aaPredicted RBP16.03■□□□□ 0.16
SPOCK1-206ENST00000509293 STAT6P42226 847 aa16.03■□□□□ 0.16
SPOCK1-206ENST00000509293 CPT1AP50416 773 aa16.03■□□□□ 0.16
SPOCK1-206ENST00000509293 DGKDQ16760 1214 aa16.03■□□□□ 0.16
SPOCK1-206ENST00000509293 SWSAP1Q6NVH7 229 aa16.03■□□□□ 0.16
SPOCK1-206ENST00000509293 KANK3Q6NY19 840 aa16.03■□□□□ 0.16
SPOCK1-206ENST00000509293 CCDC60Q8IWA6 550 aaPredicted RBP16.03■□□□□ 0.16
SPOCK1-206ENST00000509293 TPH2Q8IWU9 490 aa16.03■□□□□ 0.16
SPOCK1-206ENST00000509293 AFG1LQ8WV93 481 aa16.03■□□□□ 0.16
SPOCK1-206ENST00000509293 CCDC34Q96HJ3 373 aa16.03■□□□□ 0.16
SPOCK1-206ENST00000509293 NACC1Q96RE7 527 aa16.03■□□□□ 0.16
SPOCK1-206ENST00000509293 AZI2Q9H6S1 392 aa16.03■□□□□ 0.16
SPOCK1-206ENST00000509293 SPC25Q9HBM1 224 aa16.03■□□□□ 0.16
SPOCK1-206ENST00000509293 HMX1Q9NP08 348 aaPredicted RBP16.03■□□□□ 0.16
SPOCK1-206ENST00000509293 PRDM10Q9NQV6 1147 aa16.03■□□□□ 0.16
SPOCK1-206ENST00000509293 ZNF302Q9NR11 478 aa16.03■□□□□ 0.16
SPOCK1-206ENST00000509293 DDX20Q9UHI6 824 aaKnown RBP16.03■□□□□ 0.16
SPOCK1-206ENST00000509293 KIAA1024Q9UPX6 916 aa16.03■□□□□ 0.16
SPOCK1-206ENST00000509293 DOCK5Q9H7D0 1870 aa16.02■□□□□ 0.16
SPOCK1-206ENST00000509293 POTEB3A0JP26 581 aa16.02■□□□□ 0.16
SPOCK1-206ENST00000509293 BACH1O14867 736 aa16.02■□□□□ 0.16
SPOCK1-206ENST00000509293 ACTN4O43707 911 aaKnown RBP16.02■□□□□ 0.16
SPOCK1-206ENST00000509293 KPNA6O60684 536 aa16.02■□□□□ 0.16
SPOCK1-206ENST00000509293 MMP3P08254 477 aa16.02■□□□□ 0.16
SPOCK1-206ENST00000509293 CST5P28325 142 aaPredicted RBP16.02■□□□□ 0.16
SPOCK1-206ENST00000509293 CNGA1P29973 690 aa16.02■□□□□ 0.16
SPOCK1-206ENST00000509293 STAT5BP51692 787 aa16.02■□□□□ 0.16
SPOCK1-206ENST00000509293 SP4Q02446 784 aa16.02■□□□□ 0.16
SPOCK1-206ENST00000509293 CYP4A11Q02928 519 aa16.02■□□□□ 0.16
SPOCK1-206ENST00000509293 CTTNQ14247 550 aaKnown RBP16.02■□□□□ 0.16
SPOCK1-206ENST00000509293 ECM1Q16610 540 aa16.02■□□□□ 0.16
SPOCK1-206ENST00000509293 SLC9C1Q4G0N8 1177 aa16.02■□□□□ 0.16
SPOCK1-206ENST00000509293 NAALADL2Q58DX5 795 aa16.02■□□□□ 0.16
SPOCK1-206ENST00000509293 POTEBQ6S5H4 581 aa16.02■□□□□ 0.16
SPOCK1-206ENST00000509293 KRBA2Q6ZNG9 492 aa16.02■□□□□ 0.16
SPOCK1-206ENST00000509293 PDILTQ8N807 584 aa16.02■□□□□ 0.16
SPOCK1-206ENST00000509293 PCYT2Q99447 389 aa16.02■□□□□ 0.16
SPOCK1-206ENST00000509293 SMARCAD1Q9H4L7 1026 aa16.02■□□□□ 0.16
SPOCK1-206ENST00000509293 GABBR1Q9UBS5 961 aa16.02■□□□□ 0.16
SPOCK1-206ENST00000509293 DNM3Q9UQ16 869 aa16.02■□□□□ 0.16
SPOCK1-206ENST00000509293 TELO2Q9Y4R8 837 aa16.02■□□□□ 0.16
SPOCK1-206ENST00000509293 TRAK2O60296 914 aa16.01■□□□□ 0.15
SPOCK1-206ENST00000509293 SORBS3O60504 671 aa16.01■□□□□ 0.15
SPOCK1-206ENST00000509293 EYA4O95677 639 aa16.01■□□□□ 0.15
SPOCK1-206ENST00000509293 MYL1P05976 194 aa16.01■□□□□ 0.15
SPOCK1-206ENST00000509293 UGCGQ16739 394 aa16.01■□□□□ 0.15
SPOCK1-206ENST00000509293 LONRF3Q496Y0 759 aa16.01■□□□□ 0.15
SPOCK1-206ENST00000509293 TPRNQ4KMQ1 711 aa16.01■□□□□ 0.15
SPOCK1-206ENST00000509293 XKR3Q5GH77 459 aa16.01■□□□□ 0.15
SPOCK1-206ENST00000509293 PDXDC2PQ6P474 469 aa16.01■□□□□ 0.15
SPOCK1-206ENST00000509293 POTEGQ6S5H5 508 aa16.01■□□□□ 0.15
SPOCK1-206ENST00000509293 SH3RF1Q7Z6J0 888 aa16.01■□□□□ 0.15
SPOCK1-206ENST00000509293 CEP57L1Q8IYX8 460 aa16.01■□□□□ 0.15
SPOCK1-206ENST00000509293 BANK1Q8NDB2 785 aa16.01■□□□□ 0.15
SPOCK1-206ENST00000509293 RAD54LQ92698 747 aa16.01■□□□□ 0.15
SPOCK1-206ENST00000509293 DHX58Q96C10 678 aa16.01■□□□□ 0.15
SPOCK1-206ENST00000509293 FAM167AQ96KS9 214 aa16.01■□□□□ 0.15
SPOCK1-206ENST00000509293 PANK2Q9BZ23 570 aa16.01■□□□□ 0.15
SPOCK1-206ENST00000509293 ANKEF1Q9NU02 776 aa16.01■□□□□ 0.15
SPOCK1-206ENST00000509293 BLOC1S4Q9NUP1 217 aa16.01■□□□□ 0.15
SPOCK1-206ENST00000509293 KBTBD4Q9NVX7 518 aa16.01■□□□□ 0.15
SPOCK1-206ENST00000509293 WRAP73Q9P2S5 460 aaPredicted RBP16.01■□□□□ 0.15
SPOCK1-206ENST00000509293 DBR1Q9UK59 544 aaKnown RBP16.01■□□□□ 0.15
SPOCK1-206ENST00000509293 PPME1Q9Y570 386 aa16.01■□□□□ 0.15
SPOCK1-206ENST00000509293 SYNRGQ9UMZ2 1314 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms