RNA–Protein interactions for RNA: ENST00000509258.5

RNF4-212, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-212ENST00000509258 ANO3Q9BYT9 981 aa12.49□□□□□ -0.41
RNF4-212ENST00000509258 AGXT2Q9BYV1 514 aa12.49□□□□□ -0.41
RNF4-212ENST00000509258 JADE2Q9NQC1 790 aa12.49□□□□□ -0.41
RNF4-212ENST00000509258 RBM28Q9NW13 759 aaKnown RBP12.49□□□□□ -0.41
RNF4-212ENST00000509258 NAP1L2Q9ULW6 460 aaPredicted RBP12.49□□□□□ -0.41
RNF4-212ENST00000509258 EDIL3O43854 480 aa12.48□□□□□ -0.41
RNF4-212ENST00000509258 DTNBO60941 627 aa12.48□□□□□ -0.41
RNF4-212ENST00000509258 CTSHP09668 335 aa12.48□□□□□ -0.41
RNF4-212ENST00000509258 KCNA5P22460 613 aa12.48□□□□□ -0.41
RNF4-212ENST00000509258 TCF7P36402 384 aaPredicted RBP12.48□□□□□ -0.41
RNF4-212ENST00000509258 ITGB3BPQ13352 177 aaPredicted RBP12.48□□□□□ -0.41
RNF4-212ENST00000509258 NTRK3Q16288 839 aa12.48□□□□□ -0.41
RNF4-212ENST00000509258 TIGD5Q53EQ6 642 aa12.48□□□□□ -0.41
RNF4-212ENST00000509258 TMEM31Q5JXX7 168 aa12.48□□□□□ -0.41
RNF4-212ENST00000509258 SYNE3Q6ZMZ3 975 aa12.48□□□□□ -0.41
RNF4-212ENST00000509258 CRYGNQ8WXF5 182 aa12.48□□□□□ -0.41
RNF4-212ENST00000509258 APBB2Q92870 758 aa12.48□□□□□ -0.41
RNF4-212ENST00000509258 PHKBQ93100 1093 aa12.48□□□□□ -0.41
RNF4-212ENST00000509258 MRPL38Q96DV4 380 aaKnown RBP12.48□□□□□ -0.41
RNF4-212ENST00000509258 CDHR1Q96JP9 859 aa12.48□□□□□ -0.41
RNF4-212ENST00000509258 EPHX3Q9H6B9 360 aa12.48□□□□□ -0.41
RNF4-212ENST00000509258 NCOA5Q9HCD5 579 aaKnown RBP12.48□□□□□ -0.41
RNF4-212ENST00000509258 BARHL2Q9NY43 387 aa12.48□□□□□ -0.41
RNF4-212ENST00000509258 ARIH1Q9Y4X5 557 aaPredicted RBP12.48□□□□□ -0.41
RNF4-212ENST00000509258 TTC3P53804 2025 aa12.48□□□□□ -0.41
RNF4-212ENST00000509258 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.47□□□□□ -0.41
RNF4-212ENST00000509258 SMCO2A6NFE2 343 aa12.47□□□□□ -0.41
RNF4-212ENST00000509258 SPDYE3A6NKU9 549 aa12.47□□□□□ -0.41
RNF4-212ENST00000509258 MARK3P27448 753 aa12.47□□□□□ -0.41
RNF4-212ENST00000509258 METAP2P50579 478 aaKnown RBP eCLIP12.47□□□□□ -0.41
RNF4-212ENST00000509258 ADCY7P51828 1080 aa12.47□□□□□ -0.41
RNF4-212ENST00000509258 MTMR1Q13613 665 aa12.47□□□□□ -0.41
RNF4-212ENST00000509258 TOB2Q14106 344 aaPredicted RBP12.47□□□□□ -0.41
RNF4-212ENST00000509258 PFKFB3Q16875 520 aaPredicted RBP12.47□□□□□ -0.41
RNF4-212ENST00000509258 LEXMQ3ZCV2 418 aa12.47□□□□□ -0.41
RNF4-212ENST00000509258 EPC2Q52LR7 807 aa12.47□□□□□ -0.41
RNF4-212ENST00000509258 MARCH8Q5T0T0 291 aa12.47□□□□□ -0.41
RNF4-212ENST00000509258 JAKMIP3Q5VZ66 844 aa12.47□□□□□ -0.41
RNF4-212ENST00000509258 PPP1R18Q6NYC8 613 aa12.47□□□□□ -0.41
RNF4-212ENST00000509258 BLOC1S2Q6QNY1 142 aa12.47□□□□□ -0.41
RNF4-212ENST00000509258 RASGRP4Q8TDF6 673 aa12.47□□□□□ -0.41
RNF4-212ENST00000509258 TOP1MTQ969P6 601 aa12.47□□□□□ -0.41
RNF4-212ENST00000509258 MXRA8Q9BRK3 442 aa12.47□□□□□ -0.41
RNF4-212ENST00000509258 LRFN3Q9BTN0 628 aa12.47□□□□□ -0.41
RNF4-212ENST00000509258 IFIH1Q9BYX4 1025 aaKnown RBP12.47□□□□□ -0.41
RNF4-212ENST00000509258 KCNH7Q9NS40 1196 aa12.47□□□□□ -0.41
RNF4-212ENST00000509258 RALGAPA2Q2PPJ7 1873 aa12.46□□□□□ -0.41
RNF4-212ENST00000509258 FAM86B1E9PN63 330 aa12.46□□□□□ -0.41
RNF4-212ENST00000509258 CHRNA1P02708 482 aa12.46□□□□□ -0.41
RNF4-212ENST00000509258 FAM86B2P0C5J1 330 aa12.46□□□□□ -0.41
RNF4-212ENST00000509258 SREBF1P36956 1147 aa12.46□□□□□ -0.41
RNF4-212ENST00000509258 RCAN1P53805 252 aa12.46□□□□□ -0.41
RNF4-212ENST00000509258 ARHGAP4P98171 946 aa12.46□□□□□ -0.41
RNF4-212ENST00000509258 FBXL16Q8N461 479 aa12.46□□□□□ -0.41
RNF4-212ENST00000509258 EHMT1Q9H9B1 1298 aa12.46□□□□□ -0.41
RNF4-212ENST00000509258 AGO4Q9HCK5 861 aaKnown RBP12.46□□□□□ -0.41
RNF4-212ENST00000509258 NRCAMQ92823 1304 aa12.45□□□□□ -0.42
RNF4-212ENST00000509258 IGLV3-22A0A075B6J6 115 aa12.45□□□□□ -0.42
RNF4-212ENST00000509258 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.45□□□□□ -0.42
RNF4-212ENST00000509258 MEIS1O00470 390 aa12.45□□□□□ -0.42
RNF4-212ENST00000509258 GPR37L1O60883 481 aa12.45□□□□□ -0.42
RNF4-212ENST00000509258 CCNE2O96020 404 aa12.45□□□□□ -0.42
RNF4-212ENST00000509258 RPLP2P05387 115 aaKnown RBP12.45□□□□□ -0.42
RNF4-212ENST00000509258 HMGB1P09429 215 aaKnown RBP12.45□□□□□ -0.42
RNF4-212ENST00000509258 SCG2P13521 617 aa12.45□□□□□ -0.42
RNF4-212ENST00000509258 PDIA3P30101 505 aaKnown RBP12.45□□□□□ -0.42
RNF4-212ENST00000509258 CCT2P78371 535 aaKnown RBP12.45□□□□□ -0.42
RNF4-212ENST00000509258 PUS10Q3MIT2 529 aaKnown RBP12.45□□□□□ -0.42
RNF4-212ENST00000509258 TAF2Q6P1X5 1199 aa12.45□□□□□ -0.42
RNF4-212ENST00000509258 RSPH3Q86UC2 560 aa12.45□□□□□ -0.42
RNF4-212ENST00000509258 FAM178BQ8IXR5 827 aa12.45□□□□□ -0.42
RNF4-212ENST00000509258 GJD3Q8N144 294 aa12.45□□□□□ -0.42
RNF4-212ENST00000509258 BANK1Q8NDB2 785 aa12.45□□□□□ -0.42
RNF4-212ENST00000509258 TRAPPC12Q8WVT3 735 aa12.45□□□□□ -0.42
RNF4-212ENST00000509258 TNPO1Q92973 898 aaKnown RBP12.45□□□□□ -0.42
RNF4-212ENST00000509258 ZSWIM6Q9HCJ5 1215 aa12.45□□□□□ -0.42
RNF4-212ENST00000509258 PI4K2BG5E9Z4 385 aa12.44□□□□□ -0.42
RNF4-212ENST00000509258 H3BNC9 293 aa12.44□□□□□ -0.42
RNF4-212ENST00000509258 DDX39AO00148 427 aaKnown RBP12.44□□□□□ -0.42
RNF4-212ENST00000509258 DHX15O43143 795 aaKnown RBP12.44□□□□□ -0.42
RNF4-212ENST00000509258 PRPF3O43395 683 aaKnown RBP12.44□□□□□ -0.42
RNF4-212ENST00000509258 UPP2O95045 317 aa12.44□□□□□ -0.42
RNF4-212ENST00000509258 EVCP57679 992 aa12.44□□□□□ -0.42
RNF4-212ENST00000509258 FGD1P98174 961 aa12.44□□□□□ -0.42
RNF4-212ENST00000509258 MGAT3Q09327 533 aa12.44□□□□□ -0.42
RNF4-212ENST00000509258 PPFIA1Q13136 1202 aa12.44□□□□□ -0.42
RNF4-212ENST00000509258 GPM6BQ13491 265 aa12.44□□□□□ -0.42
RNF4-212ENST00000509258 GRIK4Q16099 956 aa12.44□□□□□ -0.42
RNF4-212ENST00000509258 CEP55Q53EZ4 464 aa12.44□□□□□ -0.42
RNF4-212ENST00000509258 FAM26DQ5JW98 314 aa12.44□□□□□ -0.42
RNF4-212ENST00000509258 PTCRAQ6ISU1 281 aaPredicted RBP12.44□□□□□ -0.42
RNF4-212ENST00000509258 RPAINQ86UA6 219 aa12.44□□□□□ -0.42
RNF4-212ENST00000509258 TMEM192Q8IY95 271 aa12.44□□□□□ -0.42
RNF4-212ENST00000509258 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.44□□□□□ -0.42
RNF4-212ENST00000509258 SEPT1Q8WYJ6 367 aa12.44□□□□□ -0.42
RNF4-212ENST00000509258 KHSRPQ92945 711 aaKnown RBP eCLIP12.44□□□□□ -0.42
RNF4-212ENST00000509258 AIFM3Q96NN9 605 aa12.44□□□□□ -0.42
RNF4-212ENST00000509258 UPF3BQ9BZI7 483 aaKnown RBP12.44□□□□□ -0.42
RNF4-212ENST00000509258 ZMYND12Q9H0C1 365 aa12.44□□□□□ -0.42
RNF4-212ENST00000509258 JPH1Q9HDC5 661 aaPredicted RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms