RNA–Protein interactions for RNA: ENST00000509009.5

PDPN-208, Transcript of podoplanin, humanhuman

TSL 4 BASIC

Gene PDPN, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-208ENST00000509009 JPH1Q9HDC5 661 aaPredicted RBP14.28□□□□□ -0.12
PDPN-208ENST00000509009 MTUS1Q9ULD2 1270 aa14.28□□□□□ -0.12
PDPN-208ENST00000509009 CCDC196A0A1B0GTZ2 297 aa14.27□□□□□ -0.13
PDPN-208ENST00000509009 RRN3P2A6NIE6 340 aa14.27□□□□□ -0.13
PDPN-208ENST00000509009 TNFRSF10AO00220 468 aa14.27□□□□□ -0.13
PDPN-208ENST00000509009 ADAMTS3O15072 1205 aa14.27□□□□□ -0.13
PDPN-208ENST00000509009 ATG7O95352 703 aa14.27□□□□□ -0.13
PDPN-208ENST00000509009 SREBF1P36956 1147 aa14.27□□□□□ -0.13
PDPN-208ENST00000509009 METAP2P50579 478 aaKnown RBP eCLIP14.27□□□□□ -0.13
PDPN-208ENST00000509009 ACTR2P61160 394 aa14.27□□□□□ -0.13
PDPN-208ENST00000509009 MGAT3Q09327 533 aa14.27□□□□□ -0.13
PDPN-208ENST00000509009 ITGB3BPQ13352 177 aaPredicted RBP14.27□□□□□ -0.13
PDPN-208ENST00000509009 AP3B2Q13367 1082 aa14.27□□□□□ -0.13
PDPN-208ENST00000509009 BLOC1S2Q6QNY1 142 aa14.27□□□□□ -0.13
PDPN-208ENST00000509009 FBXL16Q8N461 479 aa14.27□□□□□ -0.13
PDPN-208ENST00000509009 SP7Q8TDD2 431 aaPredicted RBP14.27□□□□□ -0.13
PDPN-208ENST00000509009 ADAMTS19Q8TE59 1207 aa14.27□□□□□ -0.13
PDPN-208ENST00000509009 DNAJB3Q8WWF6 145 aa14.27□□□□□ -0.13
PDPN-208ENST00000509009 APBB2Q92870 758 aa14.27□□□□□ -0.13
PDPN-208ENST00000509009 BRF1Q92994 677 aa14.27□□□□□ -0.13
PDPN-208ENST00000509009 SDF4Q9BRK5 362 aa14.27□□□□□ -0.13
PDPN-208ENST00000509009 TUBE1Q9UJT0 475 aa14.27□□□□□ -0.13
PDPN-208ENST00000509009 PRPF3O43395 683 aaKnown RBP14.26□□□□□ -0.13
PDPN-208ENST00000509009 UPP2O95045 317 aa14.26□□□□□ -0.13
PDPN-208ENST00000509009 SCG2P13521 617 aa14.26□□□□□ -0.13
PDPN-208ENST00000509009 ZNF76P36508 570 aa14.26□□□□□ -0.13
PDPN-208ENST00000509009 STAT5BP51692 787 aa14.26□□□□□ -0.13
PDPN-208ENST00000509009 IGBP1P78318 339 aa14.26□□□□□ -0.13
PDPN-208ENST00000509009 LPIN1Q14693 890 aa14.26□□□□□ -0.13
PDPN-208ENST00000509009 PLCB4Q15147 1175 aa14.26□□□□□ -0.13
PDPN-208ENST00000509009 PKN1Q16512 942 aa14.26□□□□□ -0.13
PDPN-208ENST00000509009 AAK1Q2M2I8 961 aa14.26□□□□□ -0.13
PDPN-208ENST00000509009 JAKMIP3Q5VZ66 844 aa14.26□□□□□ -0.13
PDPN-208ENST00000509009 NIPA1Q7RTP0 329 aa14.26□□□□□ -0.13
PDPN-208ENST00000509009 PLPPR4Q7Z2D5 763 aa14.26□□□□□ -0.13
PDPN-208ENST00000509009 RSPH3Q86UC2 560 aa14.26□□□□□ -0.13
PDPN-208ENST00000509009 GDPD5Q8WTR4 605 aa14.26□□□□□ -0.13
PDPN-208ENST00000509009 CRYGNQ8WXF5 182 aa14.26□□□□□ -0.13
PDPN-208ENST00000509009 ZBTB10Q96DT7 871 aa14.26□□□□□ -0.13
PDPN-208ENST00000509009 C17orf80Q9BSJ5 609 aa14.26□□□□□ -0.13
PDPN-208ENST00000509009 AGXT2Q9BYV1 514 aa14.26□□□□□ -0.13
PDPN-208ENST00000509009 IFIH1Q9BYX4 1025 aaKnown RBP14.26□□□□□ -0.13
PDPN-208ENST00000509009 AZI2Q9H6S1 392 aa14.26□□□□□ -0.13
PDPN-208ENST00000509009 COG5Q9UP83 839 aa14.26□□□□□ -0.13
PDPN-208ENST00000509009 KAT6AQ92794 2004 aa14.25□□□□□ -0.13
PDPN-208ENST00000509009 ENPP3O14638 875 aa14.25□□□□□ -0.13
PDPN-208ENST00000509009 DHX15O43143 795 aaKnown RBP14.25□□□□□ -0.13
PDPN-208ENST00000509009 CYP3A4P08684 503 aa14.25□□□□□ -0.13
PDPN-208ENST00000509009 GHRP10912 638 aa14.25□□□□□ -0.13
PDPN-208ENST00000509009 RPS6KB1P23443 525 aa14.25□□□□□ -0.13
PDPN-208ENST00000509009 FBXO47Q5MNV8 452 aa14.25□□□□□ -0.13
PDPN-208ENST00000509009 IL27Q8NEV9 243 aa14.25□□□□□ -0.13
PDPN-208ENST00000509009 TNPO1Q92973 898 aaKnown RBP14.25□□□□□ -0.13
PDPN-208ENST00000509009 HLA-CQ95604 372 aa14.25□□□□□ -0.13
PDPN-208ENST00000509009 UHRF1Q96T88 793 aaPredicted RBP14.25□□□□□ -0.13
PDPN-208ENST00000509009 ZMYND12Q9H0C1 365 aa14.25□□□□□ -0.13
PDPN-208ENST00000509009 PCDHA2Q9Y5H9 948 aa14.25□□□□□ -0.13
PDPN-208ENST00000509009 XIRP2A4UGR9 3374 aa14.25□□□□□ -0.13
PDPN-208ENST00000509009 IGLV3-22A0A075B6J6 115 aa14.24□□□□□ -0.13
PDPN-208ENST00000509009 IGKV6D-21A0A0A0MT36 114 aa14.24□□□□□ -0.13
PDPN-208ENST00000509009 ESYT2A0FGR8 921 aa14.24□□□□□ -0.13
PDPN-208ENST00000509009 FAM86B1E9PN63 330 aa14.24□□□□□ -0.13
PDPN-208ENST00000509009 REC8O95072 547 aa14.24□□□□□ -0.13
PDPN-208ENST00000509009 CCNE2O96020 404 aa14.24□□□□□ -0.13
PDPN-208ENST00000509009 FAM86B2P0C5J1 330 aa14.24□□□□□ -0.13
PDPN-208ENST00000509009 PSMA5P28066 241 aa14.24□□□□□ -0.13
PDPN-208ENST00000509009 KCNQ1P51787 676 aa14.24□□□□□ -0.13
PDPN-208ENST00000509009 EVCP57679 992 aa14.24□□□□□ -0.13
PDPN-208ENST00000509009 MRPS6P82932 125 aaKnown RBP14.24□□□□□ -0.13
PDPN-208ENST00000509009 NTRK3Q16288 839 aa14.24□□□□□ -0.13
PDPN-208ENST00000509009 MCTP2Q6DN12 878 aa14.24□□□□□ -0.13
PDPN-208ENST00000509009 ABHD15Q6UXT9 468 aa14.24□□□□□ -0.13
PDPN-208ENST00000509009 PLA2G4DQ86XP0 818 aa14.24□□□□□ -0.13
PDPN-208ENST00000509009 FBXO22Q8NEZ5 403 aa14.24□□□□□ -0.13
PDPN-208ENST00000509009 TRAPPC12Q8WVT3 735 aa14.24□□□□□ -0.13
PDPN-208ENST00000509009 YME1L1Q96TA2 773 aa14.24□□□□□ -0.13
PDPN-208ENST00000509009 AGO3Q9H9G7 860 aaKnown RBP14.24□□□□□ -0.13
PDPN-208ENST00000509009 C6orf50Q9HD87 102 aa14.24□□□□□ -0.13
PDPN-208ENST00000509009 TRPC6Q9Y210 931 aa14.24□□□□□ -0.13
PDPN-208ENST00000509009 CDY2AQ9Y6F7 541 aa14.24□□□□□ -0.13
PDPN-208ENST00000509009 BRWD1Q9NSI6 2320 aa14.24□□□□□ -0.13
PDPN-208ENST00000509009 MUC3AQ02505 3323 aa14.23□□□□□ -0.13
PDPN-208ENST00000509009 POTEB3A0JP26 581 aa14.23□□□□□ -0.13
PDPN-208ENST00000509009 RPLP2P05387 115 aaKnown RBP14.23□□□□□ -0.13
PDPN-208ENST00000509009 PDIA3P30101 505 aaKnown RBP14.23□□□□□ -0.13
PDPN-208ENST00000509009 EPC2Q52LR7 807 aa14.23□□□□□ -0.13
PDPN-208ENST00000509009 IER5Q5VY09 327 aa14.23□□□□□ -0.13
PDPN-208ENST00000509009 POTEBQ6S5H4 581 aa14.23□□□□□ -0.13
PDPN-208ENST00000509009 RTN4RL1Q86UN2 441 aaPredicted RBP14.23□□□□□ -0.13
PDPN-208ENST00000509009 PHKBQ93100 1093 aa14.23□□□□□ -0.13
PDPN-208ENST00000509009 IL17RAQ96F46 866 aa14.23□□□□□ -0.13
PDPN-208ENST00000509009 SAMD11Q96NU1 681 aa14.23□□□□□ -0.13
PDPN-208ENST00000509009 NECAB3Q96P71 396 aaPredicted RBP14.23□□□□□ -0.13
PDPN-208ENST00000509009 UIMC1Q96RL1 719 aa14.23□□□□□ -0.13
PDPN-208ENST00000509009 FAM49AQ9H0Q0 323 aaPredicted RBP14.23□□□□□ -0.13
PDPN-208ENST00000509009 SQORQ9Y6N5 450 aa14.23□□□□□ -0.13
PDPN-208ENST00000509009 NID2Q14112 1375 aa14.22□□□□□ -0.13
PDPN-208ENST00000509009 MICAL3Q7RTP6 2002 aa14.22□□□□□ -0.13
PDPN-208ENST00000509009 H3BNC9 293 aa14.22□□□□□ -0.13
PDPN-208ENST00000509009 DDX39AO00148 427 aaKnown RBP14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms