RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 GNA11P29992 359 aa16.86■□□□□ 0.29
UBE2D3-228ENST00000508974 SSRP1Q08945 709 aaKnown RBP16.86■□□□□ 0.29
UBE2D3-228ENST00000508974 GRIK4Q16099 956 aa16.86■□□□□ 0.29
UBE2D3-228ENST00000508974 TRIM22Q8IYM9 498 aa16.86■□□□□ 0.29
UBE2D3-228ENST00000508974 CCDC148Q8NFR7 591 aa16.86■□□□□ 0.29
UBE2D3-228ENST00000508974 PCYT2Q99447 389 aa16.86■□□□□ 0.29
UBE2D3-228ENST00000508974 ZBED2Q9BTP6 218 aa16.86■□□□□ 0.29
UBE2D3-228ENST00000508974 SMARCAD1Q9H4L7 1026 aa16.86■□□□□ 0.29
UBE2D3-228ENST00000508974 AZI2Q9H6S1 392 aa16.86■□□□□ 0.29
UBE2D3-228ENST00000508974 TRPC6Q9Y210 931 aa16.86■□□□□ 0.29
UBE2D3-228ENST00000508974 NFASCO94856 1347 aa16.86■□□□□ 0.29
UBE2D3-228ENST00000508974 EMSYQ7Z589 1322 aa16.86■□□□□ 0.29
UBE2D3-228ENST00000508974 NRCAMQ92823 1304 aa16.86■□□□□ 0.29
UBE2D3-228ENST00000508974 LOXHD1Q8IVV2 1947 aa16.86■□□□□ 0.29
UBE2D3-228ENST00000508974 COL4A4P53420 1690 aaPredicted RBP16.85■□□□□ 0.29
UBE2D3-228ENST00000508974 TLL1O43897 1013 aa16.85■□□□□ 0.29
UBE2D3-228ENST00000508974 ARHGEF15O94989 841 aa16.85■□□□□ 0.29
UBE2D3-228ENST00000508974 NLRP5P59047 1200 aa16.85■□□□□ 0.29
UBE2D3-228ENST00000508974 IKBKEQ14164 716 aa16.85■□□□□ 0.29
UBE2D3-228ENST00000508974 TEX2Q8IWB9 1127 aa16.85■□□□□ 0.29
UBE2D3-228ENST00000508974 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.85■□□□□ 0.294e-11■□□□□ 10.1
UBE2D3-228ENST00000508974 DBF4BQ8NFT6 615 aa16.85■□□□□ 0.29
UBE2D3-228ENST00000508974 PHOSPHO2Q8TCD6 241 aa16.85■□□□□ 0.29
UBE2D3-228ENST00000508974 ZNF274Q96GC6 653 aaPredicted RBP16.85■□□□□ 0.29
UBE2D3-228ENST00000508974 AIFM3Q96NN9 605 aa16.85■□□□□ 0.29
UBE2D3-228ENST00000508974 TUBE1Q9UJT0 475 aa16.85■□□□□ 0.29
UBE2D3-228ENST00000508974 IGLV3-22A0A075B6J6 115 aa16.84■□□□□ 0.29
UBE2D3-228ENST00000508974 KIF28PB7ZC32 967 aa16.84■□□□□ 0.29
UBE2D3-228ENST00000508974 RFXAPO00287 272 aa16.84■□□□□ 0.29
UBE2D3-228ENST00000508974 BACH1O14867 736 aa16.84■□□□□ 0.29
UBE2D3-228ENST00000508974 CCNE2O96020 404 aa16.84■□□□□ 0.29
UBE2D3-228ENST00000508974 ADAM17P78536 824 aa16.84■□□□□ 0.29
UBE2D3-228ENST00000508974 ADGRE1Q14246 886 aa16.84■□□□□ 0.29
UBE2D3-228ENST00000508974 CCDC85BQ15834 202 aaPredicted RBP16.84■□□□□ 0.29
UBE2D3-228ENST00000508974 PRR16Q569H4 304 aa16.84■□□□□ 0.29
UBE2D3-228ENST00000508974 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.84■□□□□ 0.294e-6■■■□□ 19.2
UBE2D3-228ENST00000508974 SPRED2Q7Z698 418 aa16.84■□□□□ 0.29
UBE2D3-228ENST00000508974 USP38Q8NB14 1042 aa16.84■□□□□ 0.29
UBE2D3-228ENST00000508974 BICD2Q8TD16 824 aa16.84■□□□□ 0.29
UBE2D3-228ENST00000508974 TRAPPC12Q8WVT3 735 aa16.84■□□□□ 0.29
UBE2D3-228ENST00000508974 CRYGNQ8WXF5 182 aa16.84■□□□□ 0.29
UBE2D3-228ENST00000508974 ZNF577Q9BSK1 485 aa16.84■□□□□ 0.29
UBE2D3-228ENST00000508974 WDR81Q562E7 1941 aa16.84■□□□□ 0.29
UBE2D3-228ENST00000508974 MYH9P35579 1960 aaKnown RBP16.84■□□□□ 0.29
UBE2D3-228ENST00000508974 ABHD14A-ACY1A0A1B0GW23 586 aa16.83■□□□□ 0.28
UBE2D3-228ENST00000508974 LCHNA4D1U4 455 aa16.83■□□□□ 0.28
UBE2D3-228ENST00000508974 IPO5O00410 1097 aaKnown RBP16.83■□□□□ 0.28
UBE2D3-228ENST00000508974 CYP3A4P08684 503 aa16.83■□□□□ 0.28
UBE2D3-228ENST00000508974 INSRRP14616 1297 aa16.83■□□□□ 0.28
UBE2D3-228ENST00000508974 STAT5BP51692 787 aa16.83■□□□□ 0.28
UBE2D3-228ENST00000508974 PLCB4Q15147 1175 aa16.83■□□□□ 0.28
UBE2D3-228ENST00000508974 MARCH8Q5T0T0 291 aa16.83■□□□□ 0.28
UBE2D3-228ENST00000508974 NIPA1Q7RTP0 329 aa16.83■□□□□ 0.28
UBE2D3-228ENST00000508974 MICALL1Q8N3F8 863 aa16.83■□□□□ 0.28
UBE2D3-228ENST00000508974 DNAJB3Q8WWF6 145 aa16.83■□□□□ 0.28
UBE2D3-228ENST00000508974 ARNTL2Q8WYA1 636 aa16.83■□□□□ 0.28
UBE2D3-228ENST00000508974 FAM49AQ9H0Q0 323 aaPredicted RBP16.83■□□□□ 0.28
UBE2D3-228ENST00000508974 DEXIO95424 95 aa16.82■□□□□ 0.28
UBE2D3-228ENST00000508974 TAP1Q03518 808 aa16.82■□□□□ 0.28
UBE2D3-228ENST00000508974 SCRN1Q12765 414 aa16.82■□□□□ 0.28
UBE2D3-228ENST00000508974 PLEKHG4Q58EX7 1191 aa16.82■□□□□ 0.28
UBE2D3-228ENST00000508974 MCTP2Q6DN12 878 aa16.82■□□□□ 0.28
UBE2D3-228ENST00000508974 CPLX2Q6PUV4 134 aaKnown RBP16.82■□□□□ 0.28
UBE2D3-228ENST00000508974 TRMT1LQ7Z2T5 733 aaKnown RBP16.82■□□□□ 0.28
UBE2D3-228ENST00000508974 MYOCDQ8IZQ8 938 aa16.82■□□□□ 0.28
UBE2D3-228ENST00000508974 SEPT8Q92599 483 aa16.82■□□□□ 0.28
UBE2D3-228ENST00000508974 SLKQ9H2G2 1235 aaPredicted RBP16.82■□□□□ 0.28
UBE2D3-228ENST00000508974 TPCN1Q9ULQ1 816 aa16.82■□□□□ 0.28
UBE2D3-228ENST00000508974 A0A0C4DFX4 3053 aa16.82■□□□□ 0.28
UBE2D3-228ENST00000508974 EPOPA6NHQ4 379 aa16.81■□□□□ 0.28
UBE2D3-228ENST00000508974 DLL1O00548 723 aa16.81■□□□□ 0.28
UBE2D3-228ENST00000508974 DHX15O43143 795 aaKnown RBP16.81■□□□□ 0.28
UBE2D3-228ENST00000508974 CAND2O75155 1236 aa16.81■□□□□ 0.28
UBE2D3-228ENST00000508974 CHRNA1P02708 482 aa16.81■□□□□ 0.28
UBE2D3-228ENST00000508974 GHRP10912 638 aa16.81■□□□□ 0.28
UBE2D3-228ENST00000508974 AK2P54819 239 aa16.81■□□□□ 0.28
UBE2D3-228ENST00000508974 SETQ01105 290 aaPredicted RBP16.81■□□□□ 0.28
UBE2D3-228ENST00000508974 TMEM62Q0P6H9 643 aa16.81■□□□□ 0.28
UBE2D3-228ENST00000508974 CCDC60Q8IWA6 550 aaPredicted RBP16.81■□□□□ 0.28
UBE2D3-228ENST00000508974 PRDM6Q9NQX0 595 aa16.81■□□□□ 0.28
UBE2D3-228ENST00000508974 SH3GLB2Q9NR46 395 aa16.81■□□□□ 0.28
UBE2D3-228ENST00000508974 TCEAL9Q9UHQ7 104 aa16.81■□□□□ 0.28
UBE2D3-228ENST00000508974 MTUS1Q9ULD2 1270 aa16.81■□□□□ 0.28
UBE2D3-228ENST00000508974 REV3LO60673 3130 aa16.81■□□□□ 0.28
UBE2D3-228ENST00000508974 TRANK1O15050 2925 aa16.81■□□□□ 0.28
UBE2D3-228ENST00000508974 POTEB3A0JP26 581 aa16.8■□□□□ 0.28
UBE2D3-228ENST00000508974 EFCAB14O75071 495 aa16.8■□□□□ 0.28
UBE2D3-228ENST00000508974 UPP2O95045 317 aa16.8■□□□□ 0.28
UBE2D3-228ENST00000508974 ATG7O95352 703 aa16.8■□□□□ 0.28
UBE2D3-228ENST00000508974 GJB5O95377 273 aa16.8■□□□□ 0.28
UBE2D3-228ENST00000508974 SEC24BO95487 1268 aa16.8■□□□□ 0.28
UBE2D3-228ENST00000508974 AMHP03971 560 aa16.8■□□□□ 0.28
UBE2D3-228ENST00000508974 FAM160B1Q5W0V3 765 aa16.8■□□□□ 0.28
UBE2D3-228ENST00000508974 SWSAP1Q6NVH7 229 aa16.8■□□□□ 0.28
UBE2D3-228ENST00000508974 MIS18BP1Q6P0N0 1132 aa16.8■□□□□ 0.28
UBE2D3-228ENST00000508974 TAF2Q6P1X5 1199 aa16.8■□□□□ 0.28
UBE2D3-228ENST00000508974 POTEBQ6S5H4 581 aa16.8■□□□□ 0.28
UBE2D3-228ENST00000508974 ABHD15Q6UXT9 468 aa16.8■□□□□ 0.28
UBE2D3-228ENST00000508974 PLPPR4Q7Z2D5 763 aa16.8■□□□□ 0.28
UBE2D3-228ENST00000508974 RSPH3Q86UC2 560 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms