RNA–Protein interactions for RNA: ENST00000507875.5

CLCN3-206, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2

Gene CLCN3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-206ENST00000507875 RELTQ969Z4 430 aa8.12□□□□□ -1.11
CLCN3-206ENST00000507875 MYCBPQ99417 103 aaPredicted RBP8.12□□□□□ -1.11
CLCN3-206ENST00000507875 CRNKL1Q9BZJ0 848 aaKnown RBP8.12□□□□□ -1.11
CLCN3-206ENST00000507875 PUS7LQ9H0K6 701 aaKnown RBP8.12□□□□□ -1.11
CLCN3-206ENST00000507875 EHMT1Q9H9B1 1298 aa8.12□□□□□ -1.11
CLCN3-206ENST00000507875 CBX8Q9HC52 389 aa8.12□□□□□ -1.11
CLCN3-206ENST00000507875 ABCF2Q9UG63 623 aa8.12□□□□□ -1.11
CLCN3-206ENST00000507875 ANAPC4Q9UJX5 808 aa8.12□□□□□ -1.11
CLCN3-206ENST00000507875 CYP46A1Q9Y6A2 500 aa8.12□□□□□ -1.11
CLCN3-206ENST00000507875 GAKO14976 1311 aa8.11□□□□□ -1.11
CLCN3-206ENST00000507875 GLTPD2A6NH11 291 aa8.11□□□□□ -1.11
CLCN3-206ENST00000507875 RBAK-RBAKDNI3L0D1 243 aa8.11□□□□□ -1.11
CLCN3-206ENST00000507875 TBX1O43435 398 aa8.11□□□□□ -1.11
CLCN3-206ENST00000507875 DNAJC8O75937 253 aaPredicted RBP8.11□□□□□ -1.11
CLCN3-206ENST00000507875 ATP11AP98196 1134 aa8.11□□□□□ -1.11
CLCN3-206ENST00000507875 MECOMQ03112 1051 aa8.11□□□□□ -1.11
CLCN3-206ENST00000507875 HIF1AQ16665 826 aa8.11□□□□□ -1.11
CLCN3-206ENST00000507875 CC2D1AQ6P1N0 951 aaPredicted RBP8.11□□□□□ -1.11
CLCN3-206ENST00000507875 UNC5AQ6ZN44 842 aa8.11□□□□□ -1.11
CLCN3-206ENST00000507875 RUFY3Q7L099 469 aa8.11□□□□□ -1.11
CLCN3-206ENST00000507875 RNF217Q8TC41 542 aa8.11□□□□□ -1.11
CLCN3-206ENST00000507875 E2F7Q96AV8 911 aa8.11□□□□□ -1.11
CLCN3-206ENST00000507875 SEC62Q99442 399 aaKnown RBP8.11□□□□□ -1.11
CLCN3-206ENST00000507875 CNNM2Q9H8M5 875 aa8.11□□□□□ -1.11
CLCN3-206ENST00000507875 IP6K2Q9UHH9 426 aa8.11□□□□□ -1.11
CLCN3-206ENST00000507875 MROH7-TTC4A0A0A0MT08 1334 aa8.11□□□□□ -1.11
CLCN3-206ENST00000507875 KPNA6O60684 536 aa8.11□□□□□ -1.11
CLCN3-206ENST00000507875 FAM200BP0CF97 657 aa8.11□□□□□ -1.11
CLCN3-206ENST00000507875 NAT2P11245 290 aa8.11□□□□□ -1.11
CLCN3-206ENST00000507875 VEGFAP15692 232 aaPredicted RBP8.11□□□□□ -1.11
CLCN3-206ENST00000507875 SBK1Q52WX2 424 aa8.11□□□□□ -1.11
CLCN3-206ENST00000507875 ERAP2Q6P179 960 aa8.11□□□□□ -1.11
CLCN3-206ENST00000507875 HHIPL2Q6UWX4 724 aa8.11□□□□□ -1.11
CLCN3-206ENST00000507875 OR6P1Q8NGX9 317 aa8.11□□□□□ -1.11
CLCN3-206ENST00000507875 PMEPA1Q969W9 287 aa8.11□□□□□ -1.11
CLCN3-206ENST00000507875 RIOK1Q9BRS2 568 aaKnown RBP8.11□□□□□ -1.11
CLCN3-206ENST00000507875 RNF41Q9H4P4 317 aaPredicted RBP8.11□□□□□ -1.11
CLCN3-206ENST00000507875 NMRK2Q9NPI5 230 aa8.11□□□□□ -1.11
CLCN3-206ENST00000507875 SUCOQ9UBS9 1254 aaKnown RBP8.11□□□□□ -1.11
CLCN3-206ENST00000507875 SCN9AQ15858 1988 aa8.11□□□□□ -1.11
CLCN3-206ENST00000507875 MYH8P13535 1937 aa8.11□□□□□ -1.11
CLCN3-206ENST00000507875 BAZ2AQ9UIF9 1905 aaKnown RBP8.1□□□□□ -1.11
CLCN3-206ENST00000507875 GPR75-ASB3A0A0A6YYF3 556 aa8.1□□□□□ -1.11
CLCN3-206ENST00000507875 ZNF213O14771 459 aa8.1□□□□□ -1.11
CLCN3-206ENST00000507875 MBD4O95243 580 aa8.1□□□□□ -1.11
CLCN3-206ENST00000507875 RARAP10276 462 aa8.1□□□□□ -1.11
CLCN3-206ENST00000507875 TIMP2P16035 220 aa8.1□□□□□ -1.11
CLCN3-206ENST00000507875 HSPA6P17066 643 aa8.1□□□□□ -1.11
CLCN3-206ENST00000507875 SERPINB3P29508 390 aa8.1□□□□□ -1.11
CLCN3-206ENST00000507875 POU5F1Q01860 360 aaKnown RBP8.1□□□□□ -1.11
CLCN3-206ENST00000507875 CHAF1AQ13111 956 aaPredicted RBP8.1□□□□□ -1.11
CLCN3-206ENST00000507875 ABCB5Q2M3G0 1257 aa8.1□□□□□ -1.11
CLCN3-206ENST00000507875 FAM102BQ5T8I3 360 aa8.1□□□□□ -1.11
CLCN3-206ENST00000507875 BLOC1S2Q6QNY1 142 aa8.1□□□□□ -1.11
CLCN3-206ENST00000507875 IFNL3Q8IZI9 196 aa8.1□□□□□ -1.11
CLCN3-206ENST00000507875 CNTD1Q8N815 330 aa8.1□□□□□ -1.11
CLCN3-206ENST00000507875 ZSCAN1Q8NBB4 408 aa8.1□□□□□ -1.11
CLCN3-206ENST00000507875 JPH3Q8WXH2 748 aaPredicted RBP8.1□□□□□ -1.11
CLCN3-206ENST00000507875 INTS4Q96HW7 963 aaKnown RBP8.1□□□□□ -1.11
CLCN3-206ENST00000507875 TMX3Q96JJ7 454 aa8.1□□□□□ -1.11
CLCN3-206ENST00000507875 NEK1Q96PY6 1258 aa8.1□□□□□ -1.11
CLCN3-206ENST00000507875 SH2B1Q9NRF2 756 aaPredicted RBP8.1□□□□□ -1.11
CLCN3-206ENST00000507875 COL2A1P02458 1487 aaPredicted RBP8.1□□□□□ -1.11
CLCN3-206ENST00000507875 A0A1W2PQU0 124 aa8.1□□□□□ -1.11
CLCN3-206ENST00000507875 J3QW42 95 aa8.1□□□□□ -1.11
CLCN3-206ENST00000507875 F2P00734 622 aa8.1□□□□□ -1.11
CLCN3-206ENST00000507875 FGAP02671 866 aa8.1□□□□□ -1.11
CLCN3-206ENST00000507875 ZSCAN20P17040 1043 aaPredicted RBP8.1□□□□□ -1.11
CLCN3-206ENST00000507875 MSX1P28360 303 aa8.1□□□□□ -1.11
CLCN3-206ENST00000507875 WWC2Q6AWC2 1192 aa8.1□□□□□ -1.11
CLCN3-206ENST00000507875 CCDC129Q6ZRS4 1044 aa8.1□□□□□ -1.11
CLCN3-206ENST00000507875 EP400NLQ6ZTU2 488 aa8.1□□□□□ -1.11
CLCN3-206ENST00000507875 HFE2Q6ZVN8 426 aa8.1□□□□□ -1.11
CLCN3-206ENST00000507875 NLRP8Q86W28 1048 aa8.1□□□□□ -1.11
CLCN3-206ENST00000507875 TTC14Q96N46 770 aa8.1□□□□□ -1.11
CLCN3-206ENST00000507875 SLC9A7Q96T83 725 aa8.1□□□□□ -1.11
CLCN3-206ENST00000507875 RRAGCQ9HB90 399 aa8.1□□□□□ -1.11
CLCN3-206ENST00000507875 POLMQ9NP87 494 aaPredicted RBP8.1□□□□□ -1.11
CLCN3-206ENST00000507875 TMEM39AQ9NV64 488 aa8.1□□□□□ -1.11
CLCN3-206ENST00000507875 ARPP21Q9UBL0 812 aaPredicted RBP8.1□□□□□ -1.11
CLCN3-206ENST00000507875 MAPRE3Q9UPY8 281 aa8.1□□□□□ -1.11
CLCN3-206ENST00000507875 FAM50BQ9Y247 325 aa8.1□□□□□ -1.11
CLCN3-206ENST00000507875 SLC4A4Q9Y6R1 1079 aa8.1□□□□□ -1.11
CLCN3-206ENST00000507875 SBF1O95248 1867 aa8.1□□□□□ -1.11
CLCN3-206ENST00000507875 GOLGA6L22H0YM25 854 aa8.09□□□□□ -1.11
CLCN3-206ENST00000507875 J3QL48 77 aa8.09□□□□□ -1.11
CLCN3-206ENST00000507875 ECE2O60344 883 aa8.09□□□□□ -1.11
CLCN3-206ENST00000507875 PSAPP07602 524 aa8.09□□□□□ -1.11
CLCN3-206ENST00000507875 SLC3A2P08195 630 aaKnown RBP8.09□□□□□ -1.11
CLCN3-206ENST00000507875 CYP21A2P08686 494 aa8.09□□□□□ -1.11
CLCN3-206ENST00000507875 NAT1P18440 290 aa8.09□□□□□ -1.11
CLCN3-206ENST00000507875 RPS6KB1P23443 525 aa8.09□□□□□ -1.11
CLCN3-206ENST00000507875 MLLT1Q03111 559 aaPredicted RBP8.09□□□□□ -1.11
CLCN3-206ENST00000507875 FSTL1Q12841 308 aa8.09□□□□□ -1.11
CLCN3-206ENST00000507875 MFSD14BQ5SR56 506 aa8.09□□□□□ -1.11
CLCN3-206ENST00000507875 TTLL5Q6EMB2 1281 aa8.09□□□□□ -1.11
CLCN3-206ENST00000507875 OVOS1Q6IE37 1185 aa8.09□□□□□ -1.11
CLCN3-206ENST00000507875 NCOA7Q8NI08 942 aa8.09□□□□□ -1.11
CLCN3-206ENST00000507875 NXPE3Q969Y0 559 aa8.09□□□□□ -1.11
CLCN3-206ENST00000507875 JAKMIP1Q96N16 626 aaKnown RBP8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms