RNA–Protein interactions for RNA: ENST00000507638.1

VEGFC-201, Transcript of vascular endothelial growth factor C, humanhuman

TSL 3

Gene VEGFC, Length 759 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFC-201ENST00000507638 ENOX2Q16206 610 aaKnown RBP6.81□□□□□ -1.32
VEGFC-201ENST00000507638 DUOXA2Q1HG44 320 aa6.81□□□□□ -1.32
VEGFC-201ENST00000507638 FAM47AQ5JRC9 791 aa6.81□□□□□ -1.32
VEGFC-201ENST00000507638 PRAMEF19Q5SWL8 479 aa6.81□□□□□ -1.32
VEGFC-201ENST00000507638 FKBP1CQ5VVH2 108 aa6.81□□□□□ -1.32
VEGFC-201ENST00000507638 ANKRD34AQ69YU3 496 aa6.81□□□□□ -1.32
VEGFC-201ENST00000507638 SHISA2Q6UWI4 295 aa6.81□□□□□ -1.32
VEGFC-201ENST00000507638 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.81□□□□□ -1.32
VEGFC-201ENST00000507638 VN1R5Q7Z5H4 357 aa6.81□□□□□ -1.32
VEGFC-201ENST00000507638 PLBD2Q8NHP8 589 aa6.81□□□□□ -1.32
VEGFC-201ENST00000507638 FAM151AQ8WW52 585 aa6.81□□□□□ -1.32
VEGFC-201ENST00000507638 ASIC4Q96FT7 647 aa6.81□□□□□ -1.32
VEGFC-201ENST00000507638 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.81□□□□□ -1.32
VEGFC-201ENST00000507638 RBPJLQ9UBG7 517 aa6.81□□□□□ -1.32
VEGFC-201ENST00000507638 ASPMQ8IZT6 3477 aa6.81□□□□□ -1.32
VEGFC-201ENST00000507638 ZFYVE26Q68DK2 2539 aa6.8□□□□□ -1.32
VEGFC-201ENST00000507638 MEGF11A6BM72 1044 aa6.8□□□□□ -1.32
VEGFC-201ENST00000507638 GOLGA6L3A6NEY3 463 aa6.8□□□□□ -1.32
VEGFC-201ENST00000507638 GADD45BO75293 160 aaPredicted RBP6.8□□□□□ -1.32
VEGFC-201ENST00000507638 PDGFBP01127 241 aaPredicted RBP6.8□□□□□ -1.32
VEGFC-201ENST00000507638 CYP11A1P05108 521 aa6.8□□□□□ -1.32
VEGFC-201ENST00000507638 SPP2Q13103 211 aa6.8□□□□□ -1.32
VEGFC-201ENST00000507638 ZNF804AQ7Z570 1209 aa6.8□□□□□ -1.32
VEGFC-201ENST00000507638 TCF12Q99081 682 aa6.8□□□□□ -1.32
VEGFC-201ENST00000507638 PNNQ9H307 717 aaKnown RBP6.8□□□□□ -1.32
VEGFC-201ENST00000507638 PANK3Q9H999 370 aa6.8□□□□□ -1.32
VEGFC-201ENST00000507638 NPHS2Q9NP85 383 aa6.8□□□□□ -1.32
VEGFC-201ENST00000507638 STARD7Q9NQZ5 370 aa6.8□□□□□ -1.32
VEGFC-201ENST00000507638 KIF28PB7ZC32 967 aa6.79□□□□□ -1.32
VEGFC-201ENST00000507638 STXBP3O00186 592 aa6.79□□□□□ -1.32
VEGFC-201ENST00000507638 HTATSF1O43719 755 aaKnown RBP6.79□□□□□ -1.32
VEGFC-201ENST00000507638 TAF5LO75529 589 aa6.79□□□□□ -1.32
VEGFC-201ENST00000507638 PGK1P00558 417 aa6.79□□□□□ -1.32
VEGFC-201ENST00000507638 LMNAP02545 664 aaKnown RBP6.79□□□□□ -1.32
VEGFC-201ENST00000507638 POLR3DP05423 398 aaPredicted RBP6.79□□□□□ -1.32
VEGFC-201ENST00000507638 ESRRAP11474 423 aaPredicted RBP6.79□□□□□ -1.32
VEGFC-201ENST00000507638 NOS3P29474 1203 aa6.79□□□□□ -1.32
VEGFC-201ENST00000507638 HMGCS2P54868 508 aa6.79□□□□□ -1.32
VEGFC-201ENST00000507638 CCL23P55773 120 aa6.79□□□□□ -1.32
VEGFC-201ENST00000507638 ERVK-24P63145 666 aa6.79□□□□□ -1.32
VEGFC-201ENST00000507638 IRX3P78415 501 aaPredicted RBP6.79□□□□□ -1.32
VEGFC-201ENST00000507638 WDR78Q5VTH9 848 aa6.79□□□□□ -1.32
VEGFC-201ENST00000507638 APOBEC3HQ6NTF7 200 aaKnown RBP6.79□□□□□ -1.32
VEGFC-201ENST00000507638 LRSAM1Q6UWE0 723 aa6.79□□□□□ -1.32
VEGFC-201ENST00000507638 RNF180Q86T96 592 aa6.79□□□□□ -1.32
VEGFC-201ENST00000507638 CRACR2BQ8N4Y2 399 aaPredicted RBP6.79□□□□□ -1.32
VEGFC-201ENST00000507638 DCLK2Q8N568 766 aa6.79□□□□□ -1.32
VEGFC-201ENST00000507638 GALNT11Q8NCW6 608 aa6.79□□□□□ -1.32
VEGFC-201ENST00000507638 PAGR1Q9BTK6 254 aa6.79□□□□□ -1.32
VEGFC-201ENST00000507638 SSBP4Q9BWG4 385 aaPredicted RBP6.79□□□□□ -1.32
VEGFC-201ENST00000507638 GREM2Q9H772 168 aa6.79□□□□□ -1.32
VEGFC-201ENST00000507638 SUGCTQ9HAC7 445 aa6.79□□□□□ -1.32
VEGFC-201ENST00000507638 LATS2Q9NRM7 1088 aa6.79□□□□□ -1.32
VEGFC-201ENST00000507638 COL4A4P53420 1690 aaPredicted RBP6.79□□□□□ -1.32
VEGFC-201ENST00000507638 GSC2O15499 205 aa6.78□□□□□ -1.32
VEGFC-201ENST00000507638 ADAM23O75077 832 aa6.78□□□□□ -1.32
VEGFC-201ENST00000507638 FRAT2O75474 233 aaPredicted RBP6.78□□□□□ -1.32
VEGFC-201ENST00000507638 GLRX3O76003 335 aaKnown RBP6.78□□□□□ -1.32
VEGFC-201ENST00000507638 B3GALT4O96024 378 aa6.78□□□□□ -1.32
VEGFC-201ENST00000507638 ACPPP15309 386 aa6.78□□□□□ -1.32
VEGFC-201ENST00000507638 IGHMBP2P38935 993 aaKnown RBP6.78□□□□□ -1.32
VEGFC-201ENST00000507638 CDK7P50613 346 aa6.78□□□□□ -1.32
VEGFC-201ENST00000507638 HERVK_113P62684 666 aa6.78□□□□□ -1.32
VEGFC-201ENST00000507638 HDLBPQ00341 1268 aaKnown RBP6.78□□□□□ -1.32
VEGFC-201ENST00000507638 CHRNDQ07001 517 aa6.78□□□□□ -1.32
VEGFC-201ENST00000507638 PCDH1Q08174 1060 aa6.78□□□□□ -1.32
VEGFC-201ENST00000507638 AP3B2Q13367 1082 aa6.78□□□□□ -1.32
VEGFC-201ENST00000507638 HSP90AA2PQ14568 343 aaPredicted RBP6.78□□□□□ -1.32
VEGFC-201ENST00000507638 SMAD2Q15796 467 aaKnown RBP6.78□□□□□ -1.32
VEGFC-201ENST00000507638 FOXD4L6Q3SYB3 417 aaPredicted RBP6.78□□□□□ -1.32
VEGFC-201ENST00000507638 FOXD4L3Q6VB84 417 aaPredicted RBP6.78□□□□□ -1.32
VEGFC-201ENST00000507638 C15orf52Q6ZUT6 534 aaKnown RBP6.78□□□□□ -1.32
VEGFC-201ENST00000507638 ACAD11Q709F0 780 aa6.78□□□□□ -1.32
VEGFC-201ENST00000507638 RPUSD2Q8IZ73 545 aaKnown RBP6.78□□□□□ -1.32
VEGFC-201ENST00000507638 TTLL11Q8NHH1 800 aa6.78□□□□□ -1.32
VEGFC-201ENST00000507638 NUP133Q8WUM0 1156 aa6.78□□□□□ -1.32
VEGFC-201ENST00000507638 SLC7A3Q8WY07 619 aa6.78□□□□□ -1.32
VEGFC-201ENST00000507638 TEKT1Q969V4 418 aa6.78□□□□□ -1.32
VEGFC-201ENST00000507638 KLHDC7BQ96G42 594 aa6.78□□□□□ -1.32
VEGFC-201ENST00000507638 RIPOR3Q96MK2 946 aa6.78□□□□□ -1.32
VEGFC-201ENST00000507638 HHIPQ96QV1 700 aa6.78□□□□□ -1.32
VEGFC-201ENST00000507638 XPNPEP3Q9NQH7 507 aa6.78□□□□□ -1.32
VEGFC-201ENST00000507638 TPSG1Q9NRR2 321 aa6.78□□□□□ -1.32
VEGFC-201ENST00000507638 HIF3AQ9Y2N7 669 aa6.78□□□□□ -1.32
VEGFC-201ENST00000507638 LRRFIP2Q9Y608 721 aaKnown RBP6.78□□□□□ -1.32
VEGFC-201ENST00000507638 UMODL1Q5DID0 1318 aa6.77□□□□□ -1.32
VEGFC-201ENST00000507638 PNMA6FA0A0J9YX94 578 aa6.77□□□□□ -1.33
VEGFC-201ENST00000507638 TMEM238LA0A1B0GVL6 79 aa6.77□□□□□ -1.33
VEGFC-201ENST00000507638 SLC15A5A6NIM6 579 aa6.77□□□□□ -1.33
VEGFC-201ENST00000507638 E9PSI1 815 aa6.77□□□□□ -1.33
VEGFC-201ENST00000507638 TM4SF5O14894 197 aa6.77□□□□□ -1.33
VEGFC-201ENST00000507638 CTNND1O60716 968 aaKnown RBP6.77□□□□□ -1.33
VEGFC-201ENST00000507638 PCCAP05165 728 aaPredicted RBP6.77□□□□□ -1.33
VEGFC-201ENST00000507638 TPM2P07951 284 aa6.77□□□□□ -1.33
VEGFC-201ENST00000507638 HOXC6P09630 235 aa6.77□□□□□ -1.33
VEGFC-201ENST00000507638 ACLYP53396 1101 aa6.77□□□□□ -1.33
VEGFC-201ENST00000507638 PPP2R3AQ06190 1150 aa6.77□□□□□ -1.33
VEGFC-201ENST00000507638 TTLL4Q14679 1199 aa6.77□□□□□ -1.33
VEGFC-201ENST00000507638 CLUL1Q15846 466 aa6.77□□□□□ -1.33
VEGFC-201ENST00000507638 SKOR2Q2VWA4 1001 aaPredicted RBP6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms